Mastomys coucha (southern multimammate mouse): 116080102
Help
Entry
116080102 CDS
T07224
Symbol
Psma6
Name
(RefSeq) proteasome subunit alpha type-6 isoform X1
KO
K02730
20S proteasome subunit alpha 1 [EC:
3.4.25.1
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03050
Proteasome
mcoc05010
Alzheimer disease
mcoc05012
Parkinson disease
mcoc05014
Amyotrophic lateral sclerosis
mcoc05016
Huntington disease
mcoc05017
Spinocerebellar ataxia
mcoc05020
Prion disease
mcoc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
116080102 (Psma6)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
116080102 (Psma6)
05012 Parkinson disease
116080102 (Psma6)
05014 Amyotrophic lateral sclerosis
116080102 (Psma6)
05016 Huntington disease
116080102 (Psma6)
05017 Spinocerebellar ataxia
116080102 (Psma6)
05020 Prion disease
116080102 (Psma6)
05022 Pathways of neurodegeneration - multiple diseases
116080102 (Psma6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcoc01002
]
116080102 (Psma6)
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mcoc03051
]
116080102 (Psma6)
Enzymes [BR:
mcoc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
116080102 (Psma6)
Peptidases and inhibitors [BR:
mcoc01002
]
Threonine peptidases
Family T1: proteasome family
116080102 (Psma6)
Proteasome [BR:
mcoc03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
116080102 (Psma6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
AMIN-like
Ribophorin_II
Motif
Other DBs
NCBI-GeneID:
116080102
NCBI-ProteinID:
XP_031212216
LinkDB
All DBs
Position
Unknown
AA seq
246 aa
AA seq
DB search
MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL
LDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD
ISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLE
KKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLV
ALAERD
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtggttccagcgccggttttgaccgtcacattactattttctctcccgagggc
cgactctaccaagtagaatatgctttcaaggccattaaccagggtggacttacatctgtt
gctgtcagaggaaaggactgcgcagttattgtcacacagaagaaagtacccgacaaacta
ctggattccagcacagtgactcacttgttcaagataacagaaaacattggctgtgtgatg
acaggaatgacagctgacagcagatcccaggtacagagggcacgctatgaggcagctaat
tggaaatacaaatatggctatgagattcctgtggacatgctgtgtaaaagaattgctgat
atttctcaagtctacacacagaatgctgaaatgaggccacttggttgttgtatgatttta
atcggtatagatgaagaacaaggccctcaagtgtacaagtgtgatcctgcaggctactac
tgtggctttaaagccacagcagcaggagttaaacaaacagagtcaaccagcttccttgaa
aaaaaagtgaagaagaaatttgattggacatttgaacagacagtggaaactgcaattaca
tgcctgtctactgttctgtcgattgatttcaaaccttcagaaatagaagttggagtagtt
accgttgaaaatcctaaattcaggattcttacagaagcagaaattgatgctcaccttgtt
gctctagcagagagagactga
DBGET
integrated database retrieval system
