Mastomys coucha (southern multimammate mouse): 116080230
Help
Entry
116080230 CDS
T07224
Symbol
Pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03013
Nucleocytoplasmic transport
mcoc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116080230 (Pnn)
03015 mRNA surveillance pathway
116080230 (Pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116080230 (Pnn)
03041 Spliceosome [BR:
mcoc03041
]
116080230 (Pnn)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116080230 (Pnn)
Spliceosome [BR:
mcoc03041
]
Complex C
Other components
EJC/TREX
116080230 (Pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
116080230
NCBI-ProteinID:
XP_031212397
LinkDB
All DBs
Position
Unknown
AA seq
726 aa
AA seq
DB search
MAVAVRALQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EEQKAEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEAGIVHSDAEKEQEEEEQKQ
EMEVKMEEETEVREGEKQQDSQPEEVMDVLEMVESVKNVIAEQEVMETNQVESIEPSENE
TSKELEPEMEFDVEPDKECKSLSPGKENINSLEVEKESEEKEEKEDKEPEPQPEPMAQPQ
PPPQPLPQSQPHSQPHSQPQPVLQAQPLCQPETLPLAVLQPPPQVIQEQGNLLPERKDFP
IESLKLPEVPVEPVLTVHSENKSKNKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSS
SGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHRRSVD
RKRRDTSGLERSHKSSKGGSSRDTKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSD
RKDKRR
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgctgtgagagctttgcaggagcagctagaaaaggccaaagagagcctcaag
aatgtggacgagaatatccgcaagctcaccgggcgggacccgaatgatgtgaggcccatc
caagccagattgctggccctttctggtcctggtggaggtagaggacgaggtagtttattg
ctaaggcgtggattctcagatagtggaggaggacccccagccaaacagagagacctggaa
ggggctgtcagtaggctgggtggggagcgtcggacaagaagagaatcacgccaggaaagt
gacccagaagacgatgatgttaaaaagccagcactgcaatcttctgttgtagctacctcc
aaagaacgcactcgtagagacctcatccaggatcaaaacatggatgaaaagggaaagcaa
aggaaccgacgaatatttggcttgttgatgggcacccttcaaaaatttaaacaagaatct
actgttgctactgaacggcaaaagagacgccaagaaattgaacaaaaacttgaagttcag
gctgaagaagagagaaagcaggttgaaaatgagaggagagaactgtttgaggagagacgt
gctaaacagaccgaactgcggcttctagaacagaaggttgagcttgcgcagctgcaagaa
gaatggaatgagcataatgccaagataattaagtatataagaaccaagaccaagccccat
ttgttctatattcctggaagaatgtgtccagctacccaaaagctaatagaagagtcacag
agaaaaatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaaggcggaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaaatagaggaggcaggagaggaagaggagaag
gaagcaggtatagttcatagtgatgcagagaaagaacaggaggaggaggaacaaaagcag
gaaatggaggttaagatggaggaggagactgaggtaagagaaggtgagaagcagcaggat
agtcagccagaagaagttatggatgtgctagagatggttgaaagtgtcaaaaatgtaatt
gctgagcaggaagtaatggaaactaatcaagttgaaagtatagaaccttcagaaaatgaa
actagcaaagaattggagccagagatggaatttgatgttgagccagataaagaatgtaaa
tctctttctcctggaaaagagaatattaattctctggaagtggaaaaggagtctgaggaa
aaagaggaaaaagaagataaagaacctgagccccagcccgagcctatggctcagcctcag
cccccacctcagcccctgccccagagccagccccactctcagccccactctcagccccaa
cctgttctccaggcccagcctctctgtcagcctgagactttgccgttagctgttttgcag
cctccacctcaggttattcaggagcaagggaatctactacctgagcggaaggattttcct
atagagtctctaaaactccctgaggtgcctgtagagccagtcttgacagtacattcagaa
aacaaaagcaaaaataagactaggagcagaagcagagggcgagcaagaaataagacaagc
aagagtagaagtcgaagcagcagcagcagtagttccagtagcagctctactagtagcagc
agtgggagcagctccagcagtggcagcagtagtagtcgaagcagctccagtagcagctcc
agcacaagtgggagcagcagcagagacagcagcagcagcactagcagtagcagtgagagt
aggagtcgcagtaggggccgaggacataaccgagatagaaagcacagaaggagcgtggac
cggaagcgaagggacacttcaggactagaaagaagtcacaagtcttcaaaaggtggtagt
agtagagataccaaaggatcaaaggataagaattcccgatctgacagaaaaaggtctata
tcagagagtagtcgatcaggcaaaagatcttcaagaagtgaaagagaccgaaaatcagac
aggaaagacaaaaggcgttaa
DBGET
integrated database retrieval system
