Mastomys coucha (southern multimammate mouse): 116080338
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Entry
116080338 CDS
T07224
Symbol
Six1
Name
(RefSeq) homeobox protein SIX1
KO
K15614
homeobox protein SIX1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
116080338 (Six1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcoc03000
]
116080338 (Six1)
Transcription factors [BR:
mcoc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
116080338 (Six1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
YdaS_toxin
HTH_72
Phage_mat-A
Rrn6_K-rich
Motif
Other DBs
NCBI-GeneID:
116080338
NCBI-ProteinID:
XP_031212569
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENTENNNSSSNKQNQLSPLEGGKPLMSSSEEEFSPPQSPDQNSVLLLQSNMGH
ARSSNYSLPGLTASQPSHGLQAHQHQLQDSLLGPLTSSLVDLGS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgctgccgtcgtttggttttacgcaagagcaagtggcgtgcgtgtgcgaggtt
ctgcagcaaggagggaacctggaacgtctgggcaggttcttgtggtcgttgcccgcctgc
gatcacctgcacaagaacgagagcgtgctcaaggccaaggcggtggtcgccttccaccgc
ggcaacttccgcgagctctacaagatcctggagagccaccagttctcgcctcacaaccac
cccaagctgcagcagctgtggctgaaagcgcactacgtggaggccgagaaacttcgcggc
cgacccctgggtgccgtgggcaaatatcgggtgcgccgaaaattcccgttgccgcgcacc
atctgggatggcgaggagaccagctactgctttaaggagaagtctcggggcgtgctgcgg
gagtggtacgcgcacaacccctacccctcgccgcgggagaagcgggagctggccgaggcc
accggcctcaccaccacccaggtcagcaactggtttaagaaccggaggcaaagagaccgg
gccgccgaagccaaggaaagggagaacaccgaaaacaataactcctcctccaacaagcag
aatcaactctctcctctggaagggggcaagccgctcatgtccagctcagaagaggaattc
tcacctccccaaagtccagaccagaactcggtccttctgctccagagcaatatgggccac
gccaggagctcaaactattctcttccgggcctaacggcctcccagcccagccacggcctg
caggctcatcagcatcagctccaggactctctactgggcccactcacctccagtctggtg
gacttgggttcctaa
DBGET
integrated database retrieval system
