Mastomys coucha (southern multimammate mouse): 116080432
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Entry
116080432 CDS
T07224
Symbol
Msh6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc01524
Platinum drug resistance
mcoc03430
Mismatch repair
mcoc05200
Pathways in cancer
mcoc05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
116080432 (Msh6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116080432 (Msh6)
09162 Cancer: specific types
05210 Colorectal cancer
116080432 (Msh6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
116080432 (Msh6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcoc03400
]
116080432 (Msh6)
DNA repair and recombination proteins [BR:
mcoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
116080432 (Msh6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
PWWP
MutS_IV
MUM1-like_PWWP
HORMA
Motif
Other DBs
NCBI-GeneID:
116080432
NCBI-ProteinID:
XP_031212655
LinkDB
All DBs
Position
Unknown
AA seq
1000 aa
AA seq
DB search
MSRQSTLYSFFPKSSALGATKEAAAGASRKDAAACGASASRGRDAAWSEAGPRSRPAAVS
ASPSEAKDLNGEPRRMAAPAAMPPSSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFIR
KKGKSVRVHVQFFDDSPTRGWVNKRMLKPYTGSKSKEAQKGGHFYSSKSEILRAMQRADE
ALSKDKVKRLELAVCDEPSEPEEEEEAEVHEAYLSDKSEEDNQNESEEEAQPNVQGPRRS
SRQVKKRRVISDSESDIGGSDVEFKPDTKQGSSDEVSSGVGDSDNEGLGTFGKGAPKRKR
TMAAHGGLRRKSLKKETGSAKRPTRILSETKSTLSAFSAPQNCESQTHVSGGGNDSSGPT
TWYHETLEWLKPEKRRDEHKRRPDHPEFNSTTLYVPEDFLNSCCHTPFGKRLLKQWLCAP
LCNPSAISDRLDAVEDLMAVPDKVTEVADLLKKLPDLERLLSKIHNVGSPLKSQNHPDSR
AIMYEEMTYSKKKIIDFLSALEGFKVMCKIVGLMEDVADGFKSKTLKQVVTLQTKSPKGR
FPDLTTELNRWDTAFDHEKARKTGIITPKAGFDSDYDRALADIRENEQSLLEYLDKQRSR
IGCKSIVYWGIGRNRYQLEIPDNFATRNLPEEYELKSTKKGCKRYWTKTIEKKLSNLINA
EERRDTSLKDCMRCLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSQGGDGPMCRPVILL
PAEDTLPFLELKGSRHPCITKTFFGDDFIPNDILIGCGEDAEENGKAYCVLVTGPNMGGK
STLLRQAGLLAVMAQMGCYVPAEKCRLTPVDRVFTRLGASDRIMSGESTFFVELSETASI
LRHATAHSLVLVDELGRGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSKNA
CVRLGHMACMVENECEDPSQETITFLYKFTKGACPKSYGFNAARLANLPEEVIQKGHRKA
REFERMNKSLQLFREVCLASERPTINGEAVHRLLALVNGL
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacaaagcaccctgtacagcttcttccccaagtcctcggcgctcggcgccact
aaggaggccgcggccggggcctcacgcaaagatgccgccgcctgcggagcctccgcttcc
cgcggccgggatgcggcctggagcgaggctggacctaggtcccggcccgcggcggtatct
gcctccccatcggaggcaaaggatctcaacggagagccgcggaggatggccgcgccggcg
gccatgccccccagttcctgtgacttctcaccaggtgatttggtttgggctaagatggaa
ggttacccctggtggccttgcctggtttataatcatccctttgatggaacattcatccgg
aagaaagggaaatctgtccgtgttcacgtacagttttttgatgacagtccaacaaggggc
tgggttaacaaaaggatgttaaagccatatacaggttcaaagtcaaaggaagcccaaaag
ggaggtcatttctacagttcaaagtctgaaatcctcagagcaatgcagcgtgcagatgag
gccttaagtaaagacaaggttaagaggcttgagctggcagtgtgtgatgagccttcagag
ccagaagaggaggaagaggcagaggtgcatgaggcttacttatctgataagagtgaagaa
gataatcaaaacgagagtgaagaagaagcacagcctaatgttcaggggcctaggcgaagc
agccggcaagtcaaaaagcgaagggtcatctcggactctgagagtgacattggtggctct
gatgtagaattcaagccagacactaaacaaggaagcagtgacgaagtaagcagtggagtt
ggggacagcgataatgaaggcctaggcacctttggcaaaggtgctccaaagcggaagaga
accatggctgctcatggtggacttagaaggaaaagtttgaagaaggaaacaggctcagcc
aaacgaccaactcgcattctgtcagaaaccaagagtaccttgagtgctttctctgcccct
cagaattgtgaatcccaaacccacgtcagtggaggaggtaacgacagcagtggacccact
acttggtatcacgaaactttagaatggcttaagccggaaaagagaagagatgagcacaag
agacgccctgatcaccctgaatttaattccaccacgctgtatgtgcctgaagatttcctc
aactcttgttgtcacaccccctttggcaagcggctcttaaaacagtggctttgtgccccc
ctctgcaacccttctgctatcagtgaccgtttagatgctgtggaagatctcatggctgtg
cctgacaaagtcaccgaagttgcagacctcctaaagaagctaccagatcttgagaggcta
ttgagtaagattcacaatgttgggtctcccctaaagagccagaaccatccagatagcagg
gctataatgtacgaagaaatgacatacagcaaaaaaaagatcattgattttctctctgct
ctagaaggattcaaagtaatgtgtaaaattgtagggcttatggaggatgtcgctgatggt
tttaagtctaaaacccttaagcaggttgttactctacaaacaaaaagtcctaaaggccgt
tttcctgatctgaccacagaactgaaccgatgggatacagcttttgaccatgagaaggct
cgaaagactggaatcattactccaaaagcagggtttgactcagattatgaccgagcactt
gctgatataagagagaatgaacagagcctcctggagtacttagacaaacagcgtagtcgg
attggctgtaagagcatagtctactggggaattggcaggaaccgttaccagttagagatt
ccagataattttgctacccgtaatctacctgaagaatatgagttgaaatctactaaaaag
ggctgtaaacgatactggaccaaaacgattgagaagaaattatccaatcttataaatgct
gaagaacgtagggacacatctttaaaggactgtatgcggtgtctgttctataattttgat
aaaaattacaaggactggcagtctgctgtagagtgcattgcagtgttggatgtcttactg
tgcctggctaactatagtcaaggaggagatggtcctatgtgtcgcccagtaattctgtta
ccggcagaagacacacttcccttcttagagcttaaaggttcacgacatccctgcattaca
aagactttttttggagacgattttatccctaatgacattctaataggctgtggggaagat
gcagaggaaaatggcaaagcctattgtgtgcttgtgactggaccaaatatggggggcaaa
tctacactcctaagacaagctggtctgttagctgtaatggcccagatgggttgttacgta
cctgctgagaagtgtaggctcacaccagttgatagagtgtttactagacttggtgcctca
gacagaataatgtcaggggaaagtacattttttgttgagttgagtgaaactgctagcata
cttaggcacgcaacagcacattctttggtacttgtggatgaattaggaagaggtactgca
acttttgatgggacagcgatagccaatgcggttgttaaagaacttgctgaaaccataaag
tgtcgaacactgttttctacacactatcattcattagtagaagattattctaaaaatgct
tgtgtgcgcctaggacatatggcatgcatggtagaaaatgaatgtgaggatcccagccag
gagactattactttcctctataagttcactaagggagcttgccctaagagctatggcttt
aacgcagcaaggcttgccaatcttccagaggaggttattcagaagggacacagaaaagca
agagaatttgagaggatgaacaagtcattacagctatttcgggaagtttgtctggctagt
gaaaggccaactataaatggtgaagctgtccatagactgctggctttggttaacggactg
tag
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integrated database retrieval system
