Mastomys coucha (southern multimammate mouse): 116080508
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Entry
116080508 CDS
T07224
Symbol
Abcb5
Name
(RefSeq) ATP-binding cassette sub-family B member 5
KO
K05660
ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116080508 (Abcb5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcoc02000
]
116080508 (Abcb5)
Transporters [BR:
mcoc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
116080508 (Abcb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
RsgA_GTPase
DEAD
AAA_5
Zeta_toxin
AAA_29
Rad17
AAA_30
AAA_7
AAA_33
AAA_21
AAA_28
AAA_14
AAA_25
AAA_18
G-alpha
AAA_15
DUF87
nSTAND1
P-loop_TraG
DUF3703
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
116080508
NCBI-ProteinID:
XP_031212735
LinkDB
All DBs
Position
Unknown
AA seq
1255 aa
AA seq
DB search
MAHSERANGLQESNQRYGPLQEQLPKAGNQAVGPIEIFRFADNLDTVLMTLGILASLING
ATVPLMSVVLGEISDHFINGCLVQTNRTKYQNCSQSQEKLNEDIITLTLYYIGIGAAALV
FGYVQISFWVITADRQTTRIRKQFFHSILAQDISWFDGSDICELNTRMTGDISKLCDGIG
DKIPLMFQNLSGFSIGLVISLIKSWKLSLVVLSTSPFIMASSALCSRMVISLTSKELDAY
SKAGAVAEEALSSIQTVTAFGAQEKEIQRYTQHLKDAKDAGIKRAIASKLSLGAVYFFMN
GAYGLAFWYGTSLIFGGEPGYTIGTILAVFFSVIHSSYCIGSVAPHLETFTVARGAAFNI
FQVIDKKPNIDNFSTAGYVPECIEGNIEFKNVSFSYPSRPSVKILKGLNLKIKAGETVAL
VGPSGSGKSTTVQLLQRLYDPEEGCITVDENDIRAQNVRHYREQIGVVRQEPVLFGTTIG
NNIKFGREGVSEEEMEQAAREANAYDFIMAFPKKFNTLVGEKGAQMSGGQKQRIAIARAL
VRNPKILILDEATSALDTESESLVQAALEKASKGRTTIVVAHRLSTIRGADLIVTMKDGM
VVEKGTHAELMAKQGLYYCLAMAQDVKKADEQMESRTCSAAGNTSSSSLCDVNSAMSPCT
EQLEEVIHHQKTSLPEVSLLKIFKLSKSEWPFVLLGTLASVLNGSVHPAFSIIFGKLVTM
FEDKNKATFKQDAELYSMMLVVLGIVGLVTYLLQGLFYGRAEENLAMRLRHSAFKAMLYQ
DIAWYDDKENNTGALTTTLAMDVAQIQGAATSRLGIITQDVTNMSLSILISFIYGWEMTL
LILSFAPVLAVTGMIQTSAAAGFANKDKQELKRAGKIATEAVENIRTVVSLTREKAFEQM
YEETLQTQHRTALKRAHITGCCYAVSHAFVHFAHAAGFRFGAYLIQAGRMMPEGMFIVFT
AIAYGAMAIGETLVWAPEYSKAKAGASHLFALLKNKPTIDSCSQSGEKPDTCEGNLEFRE
VSFFYPCRPEVPVLRDMSLSIEKGKTIAFVGSSGCGKSTCVQLLQRFYDPVKGQVLLDGI
DVKELNVQWLRSQTAIVSQEPVLFNCSIAENIAYGDNSRMVPLEEIKEVADAANIHSFIE
GLPRKYNTQVGLRGVQLSGGQKQRLAIARALLRKPKILLLDEATSALDNESEKVVQQALD
KARRGRTCLVVAHRLSTIQNADMIVVLQNGSIKEQGTHQELLRNGDTYFKLVAAH
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atggcacattctgaaagagccaatgggttgcaagaaagtaatcagagatatggacctctg
caagaacaactgcctaaagcaggaaatcaggctgttggacctattgagatattccgtttt
gctgataatctggacactgttctcatgaccctaggaatactagcatccttgataaatgga
gccactgttcctttaatgtccgtggttttaggagaaataagtgatcattttattaatgga
tgcctagtccaaactaacagaactaaatatcagaactgttctcagtctcaagaaaagctg
aatgaggatatcattacgttgactctatattatattggaataggagcagctgccctcgtt
tttggctacgtgcagatttccttctgggtcataactgcagaccggcaaaccacaagaatc
cgaaaacagttttttcattcaattttggcacaagatatcagctggtttgatggcagtgac
atctgtgaacttaacacccgcatgactggtgacatcagcaaactctgtgatggtattgga
gataagatccctctgatgtttcagaacttatctgggttttctattggcctggtgataagc
ttgataaagagctggaaactctccctggtggttctgtctacatctcctttcataatggct
tcatcagcactgtgctctaggatggttatctcattgaccagtaaggagctggatgcctat
tccaaagctggggctgtggctgaagaagccttgtcatcaatccaaacagtcacagctttt
ggagcccaagagaaagaaattcaaaggtatacacagcatttaaaggatgcaaaggatgct
ggcataaagagggctatagcttcaaagctgtctcttggagccgtctacttctttatgaat
ggagcctatggactggctttttggtatggaacctccttgatttttggcggagagcctggt
tacaccatcgggactattcttgctgttttcttcagtgtgatccatagtagttactgcatt
ggatctgtagcccctcacctggaaaccttcactgtagccagaggagccgcctttaatatt
ttccaggttattgataagaaaccgaatatagataacttttcaacagctggatatgtacct
gagtgtatagaaggaaacatagaatttaaaaacgtttctttcagctatccatcaagacct
tctgtcaagattctgaaaggtctcaatctcaagattaaggctggagagacagtagctttg
gttggtcccagtggcagtggcaagagtacaacagtccagcttctgcagaggctgtatgac
cccgaagaaggctgtatcacggtagatgagaatgacatccgagcccaaaacgtgcgacat
taccgagagcaaattggagtggtcagacaagagccagttctgtttgggaccaccatcggt
aacaatattaagtttgggcgggaaggcgtgagtgaagaggaaatggagcaggcagcgagg
gaggcaaacgcctacgacttcataatggcctttcctaagaaatttaatacactagtaggg
gaaaaaggagctcaaatgagtggaggccagaaacagagaatcgccattgctcgagcgcta
gttcgaaaccccaaaattctgatcttagatgaggctacatctgccctcgacacagagagt
gagtcacttgttcaagctgcactggagaaggcaagcaaaggccggactacaattgtggta
gcacaccggctctccactattcgtggggcagacctgattgtgacgatgaaggatggcatg
gtggtggagaaagggacccatgctgaactaatggcaaagcaagggctgtactactgcctt
gccatggcacaggatgttaaaaaggcagatgaacaaatggagtcaaggacatgttctgct
gcaggaaacaccagctctagttctctgtgcgatgtgaatagtgccatgtcgccctgcact
gagcagttggaggaagtcatacaccatcaaaagacaagtcttcctgaagtctcactatta
aaaatatttaaattaagcaagtctgaatggccttttgtgcttctcggaacattggcttct
gtcttaaatggatctgttcatccagcattttccatcatctttggaaaattagtcactatg
tttgaagataaaaataaagctacattcaaacaggacgcagagctgtactccatgatgttg
gtcgtcttgggcatagtaggtcttgtcacctacttgctgcaggggttgttttatggcaga
gcagaggaaaatttagccatgagattaagacactcggcattcaaagccatgctctaccag
gatatagcctggtatgatgataaagagaacaacactggagccctgaccacaacgttagcc
atggatgtagcacagattcagggtgcagcaacttcaagacttgggatcataacacaagat
gttaccaacatgagtctatccattctcatctccttcatatacggatgggagatgacactc
ctgattctcagctttgcccctgtacttgcagtgacaggaatgattcaaacctcagcagcg
gctggctttgccaacaaggataagcaagagcttaagcgtgctggaaagatagcaacagaa
gctgtggagaacatacgtacagtagtgtcattaacaagagagaaagcctttgagcaaatg
tatgaggagacacttcagacccaacacagaactgccttgaagagagcacacatcactgga
tgctgctatgcagtcagccatgcttttgtgcattttgcccatgcagcagggttccgattt
ggagcctatttgattcaagctggacggatgatgccagaaggcatgttcatagtctttact
gccattgcatacggggctatggccattggagaaacacttgtttgggctcctgaatattcc
aaagccaaagctggagcttcacatctgtttgctttgctgaaaaataaaccaacgatagac
agctgcagtcaaagtggggaaaaaccagacacctgtgaagggaatttagaatttcgagaa
gtctctttcttctatccttgtcggccagaagttcctgtccttcgggacatgtccctcagc
attgagaaagggaagactatagcatttgttgggagcagcggctgtgggaaaagcacatgt
gttcaactactgcaaagattttatgaccccgtgaaaggacaagtgctgcttgacggcatt
gatgtaaaagaattgaacgtgcagtggctgcgttcccagacagccatcgtctcgcaagag
cctgtgctcttcaactgtagcatcgctgagaacattgcctatggtgataacagccgcatg
gtgcccttagaggagatcaaagaggtcgcagatgcagccaacatccattctttcattgaa
gggctcccaaggaaatacaacacccaagtgggactaagaggcgtgcaactttctggcggc
cagaaacaaagactggctattgcaagggctcttctccggaagccaaaaattttactgctg
gatgaggccacttcagccctagacaatgagagtgagaaggtggtccaacaggcccttgat
aaagcccggagagggaggacctgcctagtggtggctcacagactgtccacaatacagaat
gcagatatgatcgtagttttgcaaaatggaagcatcaaggagcagggaactcatcaggag
ctcctgagaaatggagacacatactttaaattagtagctgcacattag
DBGET
integrated database retrieval system
