KEGG   Mastomys coucha (southern multimammate mouse): 116080547
Entry
116080547         CDS       T07224                                 
Name
(RefSeq) LOW QUALITY PROTEIN: histone-binding protein RBBP7-like
  KO
K11659  histone-binding protein RBBP7
Organism
mcoc  Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03082  ATP-dependent chromatin remodeling
mcoc03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:mcoc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    116080547
   03083 Polycomb repressive complex
    116080547
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mcoc03036]
    116080547
Chromosome and associated proteins [BR:mcoc03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     116080547
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     116080547
    PRC2.2
     116080547
  Chromatin remodeling factors
   NuRD complex
    116080547
   NuRF complex
    116080547
SSDB
Motif
Pfam: CAF1C_H4-bd WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 EIF3I WD40_WDHD1_1st Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd eIF2A WD40_RFWD3 Beta-prop_RIG_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st WD_LRWD1 Beta-prop_DCAF12 Beta-prop_WDR19_1st MIOS_WD40 Beta-prop_DCAF4 Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 116080547
NCBI-ProteinID: XP_031212780
LinkDB
Position
Unknown
AA seq 421 aa
MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY
ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI
NYEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPYPSGECNPDLRLRGHQKEGY
GLSXNSNLSGRLLRASDDHTVCLWDINAGTKEGKIVDAKAIFTGHLPVVEDVAWHLLHES
LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW
DLRNLKLKLHTFESHKDENFQVHWSPHNETILASSGTDRRLNVWDLSKIEEQSAEDAEDG
PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSELE
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggcaagtaaagagatgtttgaagatactgtggaggagcgtgtcatcaacgaagaatat
aaaatctggaagaagaatacaccgtttctgtatgacctggttatgactcatgctcttcag
tggcccagtcttaccgttcagtggcttcctgaagtgactaaaccagaaggaaaggattat
gcccttcattggctagtgctgggtactcatacatctgatgagcagaatcatctggtggtt
gctcgagttcatattcccaatgatgatgcacagtttgatgcttcccattgtgacagtgac
aagggagaatttggtggctttggttctgtaacaggaaagattgaatgtgaaattaaaatt
aattatgaaggagaagtaaatcgtgctcgctatatgccacagaatcctcacatcattgcc
acaaaaacaccatcttctgatgttttggtttttgactatacaaaacaccctgcaaaacca
tatccaagtggagaatgtaatcctgatcttagattaagaggtcaccaaaaggaaggctat
ggtctttcctgaaattctaatttgagtggacgtctcctgagggcatctgatgaccatact
gtctgtctgtgggatataaatgcaggaacaaaggaaggcaaaattgtggatgctaaagcg
atctttactggccacttacctgttgtagaggatgtggcctggcatctgctgcatgagtcc
ttgtttggatctgttgctgatgatcagaaacttatgatatgggacaccagatccaacacc
acttctaagccaagccatttggtggatgcacacactgctgaggtcaactgcctctcattc
aatccctacagcgagttcattctggcaactggttctgcagataagactgtagctttatgg
gacctgcgtaatctgaaactgaaactccacaccttcgaatcacataaggatgaaaatttc
caggtccactggtctccacataatgaaactattctggcttcaagtggtactgatcgccgc
ctgaatgtgtgggatttaagtaaaattgaagaacaatcagcagaagatgcagaagatggc
cctccagagctcctgtttattcatggagggcacactgccaagatttctgacttcagttgg
aatcccaatgaaccttgggtcatttgctctgtgtctgaagataatatcatgcagatatgg
cagatggctgaaaatatttacaatgatgaagagtcagatgtcacgacctcggaactggag
gggtga

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