Mastomys coucha (southern multimammate mouse): 116080577
Help
Entry
116080577 CDS
T07224
Symbol
Scfd1
Name
(RefSeq) sec1 family domain-containing protein 1 isoform X1
KO
K19998
sec1 family domain-containing protein 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116080577 (Scfd1)
Membrane trafficking [BR:
mcoc04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
116080577 (Scfd1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
116080577 (Scfd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
cwf21
Motif
Other DBs
NCBI-GeneID:
116080577
NCBI-ProteinID:
XP_031212829
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
MVGSKMAATASIRDRQTVALKRMLNFNVPHVKNSTGEPVWKVLIYDRFGQDIISPLLSVK
ELRDMGITLHLLLHSDRDPIPDVPAVYFVMPTEENIDRLCQDLRNQLYESYYLNFISAIS
RSKLEDIANAALAASAVSQVAKVFDQYLNFITLEEDMFVLCNQNKELVSYRAINRPDITD
TEMETVMDTIVDSLFCFFVTLGAVPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSLFTG
DPLGTGQFSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESTGMENS
PAGARPKRKNMKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMG
LEGEDEGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFE
YEEKIMSKTTLDKSLLDVISDPDAGTPEDKMRLFLIYYISAQQAPSEVDLEQYKKALTDA
GCSLSPLQYIKQWKAFAKMASTPASYGNTTTKPMGLLSRVMNTGSQFVMEGVKNLVLKQQ
NLPVTRILDNLMEMKSNPETDDYRYFDPKMLRSNDSSVPRNKSPFQEAIVFVVGGGNYIE
YQNLVDYIKAKQGKHILYGCSEIFNATQFIKQLSQLGQK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggtgggaagcaagatggcggccacggccagcattcgggacaggcaaacagtggctctg
aagcggatgttgaatttcaatgtgcctcatgttaaaaacagtactggagaaccagtatgg
aaggtactcatttatgacagatttggccaagatatcatctctcctctgctgtctgtgaaa
gagctgagagacatgggcatcactctgcatctccttttgcactcggaccgagatccgatt
ccagatgttcctgcagtgtactttgtgatgccaaccgaagaaaatatcgacagactgtgc
caggatcttcgaaatcagctctatgaatcctattatttgaattttatttctgcgatttca
agaagtaaactggaagacattgcaaatgcagcattggccgctagtgcagtctcacaagtt
gccaaggtttttgaccagtatctcaattttattactttggaagaggacatgtttgtatta
tgtaatcaaaataaggagcttgtttcatatcgtgccatcaataggccagatatcacagac
acagagatggagacagttatggacactattgttgacagcctcttctgcttttttgttacg
ttaggtgctgttcccatcatccgatgctcaagaggaacggccgcagaaatggtggcagtg
aaactagataaaaaactccgggaaaatctaagagatgcaagaaacagccttttcactggt
gatccacttggaactggccaattcagcttccaaaggcctttattagtccttgtcgacaga
aacattgacttggcaacacctttacaccatacatggacataccaagcgctggtacatgat
gtgctggatttccacctaaacagagtaaatttggaagaatctacaggaatggaaaattct
ccagctggtgctagaccaaagaggaaaaatatgaagtcttacgatttaactccagttgat
aaattttggcagaaacataaaggaagcccattcccagaagtcgcagaatcagtccaacaa
gaactagaatcttacagagcacaagaagatgaggtcaaacgactaaagagcattatggga
ctagaaggagaggacgaaggagccatcagcatgctctctgataacactgctaagctcacg
tcagctgtcagttctttgccagaactccttgaaaaaaaaagacttattgatctccataca
aatgttgccactgctgttttagaacacataaaggcaagaaaactggatgtatattttgaa
tatgaagaaaaaataatgagcaagactactctggataagtccctcctagacgtcatatct
gaccctgatgcagggactccggaagacaaaatgaggctgtttctcatctattacataagc
gcgcagcaggcaccatctgaggttgatttggagcaatacaaaaaggctttaacagacgca
ggctgcagccttagccctttgcagtacatcaaacagtggaaggcttttgccaagatggcc
tcgactcctgccagctatgggaacactaccactaaaccaatgggtcttctatcccgagtc
atgaatacaggatcccagtttgtgatggaaggtgtgaagaacctggtattgaagcagcag
aatctacctgttactcgaattttagacaatctcatggagatgaagtcaaaccctgaaact
gatgattatagatattttgatcccaaaatgctgcggagtaatgacagctcagttcctagg
aacaaaagtccattccaagaggccattgtctttgtggtcggaggaggcaactatattgaa
tatcagaatcttgttgactacataaaggcgaagcaaggcaagcacattctatatggctgc
agtgagatttttaatgctacacagttcataaaacagctgtcacagcttggacagaaataa
DBGET
integrated database retrieval system
