Mastomys coucha (southern multimammate mouse): 116080660
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Entry
116080660 CDS
T07224
Symbol
Calcoco1
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 1
KO
K25828
calcium-binding and coiled-coil domain-containing protein 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcoc03021
]
116080660 (Calcoco1)
04131 Membrane trafficking [BR:
mcoc04131
]
116080660 (Calcoco1)
Transcription machinery [BR:
mcoc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
Others
116080660 (Calcoco1)
Membrane trafficking [BR:
mcoc04131
]
Autophagy
ER-phagy
ER-phagy recepters
116080660 (Calcoco1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CALCOCO1
SKICH
Zn-C2H2_12
Crescentin
ACBP4_C
CC4_CEP85
Vps23_core
DUF724
zf-Tbcl_FmdE
Motif
Other DBs
NCBI-GeneID:
116080660
NCBI-ProteinID:
XP_031213001
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MEESSLSRAPSRCGVNFLNVARTYIPNTKVECHYTLPPGTMPSASDWIGIFKVEAACVRD
YHTFVWSSVPESTTDGSPTHASVQFQASYLPKPGAQLYQFRYVNRQGRVCGQSPPFQFRE
PRPMDELVTLEEADGGSDILLVVPKATVLQNQLDESQQERNDLMQLKLQLEDQVTELRSR
VQELEAALATARREHSELTEQYKGLSRSHGELSEERDILSQQQGEHVARILELEDDIQTM
SDKVLMKEVELDRVRDTVKALTREQEKLLRQLKEFQTDKEQHEAELQMVREENCCLNTEL
QEAKGRQEEQGAQVQRLKDKLAHMKDTLGQAQQKVAELEPLKEQLRGVQELAASNQQKAA
LLGEELASAAGARDRTIAELHRSRLEVAEVNGRLAELSLHVKEEKCQWNKERAGLLQSME
AEKDKILKLSAEILRLEKTVQEERSQTHTLKTELAREKDSSLVQLSESKRELTELRSALR
VLQKEKEQLQTEKQELLEYMRKLEARLEKVADEKWTEDAATEDEEASAGLSCPAALTDSE
DESPEDMRLPSYGLCERGNTSSSPPGPQEASSLVVINQPAPIAPQLSGPGEASSSDSEAE
DEKSVLMAAVQSGGEEANLLLPELGSAFYDVASAFTVSSLSEASTGVPANPPWKECPICK
ERFPAESDKDALEGHMDGHFFFSTQDPFTFE
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggaagagtcatcactaagccgggcaccatcccggtgtggagtcaacttcctgaatgtg
gcccggacctacatccccaacaccaaggtggaatgtcactatactctgcctccaggcacc
atgcccagtgccagtgactggattggcatttttaaggtggaagctgcctgtgttcgggat
tatcacacatttgtatggtcctcagtgccagaaagtacaactgatggctcccccacccac
gccagtgtccaattccaagccagctacctacccaaaccaggagcccaactctaccagttc
cggtatgtgaaccgccagggccgggtgtgtgggcagagccccccattccagttccgagag
ccaaggcccatggatgagctggtgaccctggaggaggctgatggaggctctgacatcctg
ttggttgtccctaaggctaccgtgcttcagaaccagctggatgagagccagcaggagcgg
aatgacctgatgcagctgaagctgcagttggaggatcaggtgacagagctgaggagccga
gtgcaggagctggaggcagctctggccacagccaggcgggagcattcggagctcactgag
caatacaaggggctctcccggtctcatggggagctctcagaagagagggacatcctgagc
cagcagcagggagagcatgtggcccgtatcctggagttagaggatgacatccagaccatg
agtgacaaagtgctgatgaaggaggtggagctggacagggttagagacacagtgaaggcc
ctgacaagggaacaagaaaagctcctgagacaactgaaggaattccagacagacaaggag
cagcatgaggctgagttacaaatggtccgagaggagaactgctgcttaaatacagagctg
caggaggccaagggccggcaagaagagcaaggtgctcaggtccaacggttgaaggacaag
ttggcccacatgaaagacaccctgggccaagcccagcagaaagtggccgagctggagccc
ctgaaagagcagctccgaggggtccaggaacttgcagcctcaaaccaacagaaagcggcc
cttcttggggaggagttggccagtgcagcaggagctagagaccgaaccatagctgagctg
caccgcagccgactggaggtagctgaagtcaatggccgactggctgagctcagcctgcac
gtgaaggaggaaaagtgccaatggaacaaggaacgggcagggctgttgcagagcatggag
gctgagaaggataagatcctgaagctgagtgcggagattctccggctggagaagacagta
caggaggagaggagccagacccacacactcaagactgagctggcccgagaaaaggattct
agcctggtgcagttgtcagagagtaagcgggagctcacagagcttcggtcagccctccgt
gtgcttcagaaggagaaagagcagttgcagacagagaaacaggaactgctggagtacatg
aggaagctggaggcccgcctggagaaggtggcagatgagaagtggacggaagatgctgcc
acagaagacgaggaagccagtgctgggctgagctgccctgcagctctgacagactcagag
gatgagtccccagaagacatgcggctcccatcctatggcttgtgtgagcgtggaaacaca
agctcctctcctcctgggcctcaggaggcttcttctcttgttgtcatcaaccagccagca
cccattgctccccagctctcagggccaggggaggccagcagctcagactcagaggctgaa
gatgagaagtcagtcttgatggcagctgtgcagagtgggggtgaggaagccaacctccta
cttcctgagctcggcagtgccttctatgacgtggccagtgcctttacagtgagttccctg
tcagaggccagcactggggtcccagccaacccaccatggaaggaatgtcccatctgcaag
gagcgcttccctgctgagagtgacaaggatgccctggagggtcacatggatggacatttc
tttttcagcacccaggaccctttcacctttgagtga
DBGET
integrated database retrieval system
