Mastomys coucha (southern multimammate mouse): 116080788
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Entry
116080788 CDS
T07224
Symbol
Lamb1
Name
(RefSeq) laminin subunit beta-1 isoform X1
KO
K05636
laminin, beta 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04151
PI3K-Akt signaling pathway
mcoc04510
Focal adhesion
mcoc04512
ECM-receptor interaction
mcoc05145
Toxoplasmosis
mcoc05146
Amoebiasis
mcoc05165
Human papillomavirus infection
mcoc05200
Pathways in cancer
mcoc05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
116080788 (Lamb1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116080788 (Lamb1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116080788 (Lamb1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116080788 (Lamb1)
09162 Cancer: specific types
05222 Small cell lung cancer
116080788 (Lamb1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
116080788 (Lamb1)
09174 Infectious disease: parasitic
05146 Amoebiasis
116080788 (Lamb1)
05145 Toxoplasmosis
116080788 (Lamb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
F5_F8_type_C
ATG17_like
DUF348
Motif
Other DBs
NCBI-GeneID:
116080788
NCBI-ProteinID:
XP_031213225
LinkDB
All DBs
Position
Unknown
AA seq
1834 aa
AA seq
DB search
MEGPLSSLPTFAFFPLYLSRKEDTKKRQAACLPRPPSRVATPRLQGLDMGLLQVFAFGVL
ALWGTRVCAQVPEFSYGCAEGSCYPATGDLLIGRAQKLSVTSTCGLHKPEPYCIVSHLQE
DKKCFICDSRDPYHETHNPDSHLIENVVTTFAPNRLKIWWQSENGVENVTIQLDLEAEFH
FTHLIMTFKTFRPAAMLIERSSDFGKTWGVYRYFAYDCESSFPGISTGPMKKVDDIICDS
RYSDIEPSTEGEVIFRALDPAFKIEDPYSPRIQNLLKITNLRIKFVKLHTLGDNLLDSRM
EIREKYYYAVYDMVVRGNCFCYGHASECAPVDGVDEEVEGMVHGHCMCRHNTRGLNCELC
MDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGR
NCEQCKPFYFQHPERDIRDPNLCEPCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLHV
EGERCDVCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQ
CLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCNEVESGYYFTTL
DHYIYEAEEANLGPGVVVVERQYIQDRIPSWTGPGFVRVPEGAYLEFFIDNIPYSMEYEI
LIRYEPQLPDHWEKAVITVQRPGKIPTSSRCGNTVPDDDNQVVSLSPGSRYVVLPRPVCF
EKGMNYTVRLELPQYAASGSDVESPYTLIDSLVLMPYCKSLDIFTVGGSGDGEVTNSAWE
TFQRYRCLENSRSVVKTPMTDVCRNIIFSISALIHQTGLACECDPQGSLSSVCDPNGGQC
QCRPNVVGRTCNRCAPGTFGFGPNGCKPCDCHLQGSVSAFCDAITGQCHCFQGIYARQCD
RCLPGYWGFPSCQPCQCNGHAEDCDTVTGQCLSCQDYTTGHNCERCLAGYYGDPVIGSGD
HCRPCPCPDGPDSGRQFARSCYQDPVTLQLACVCDPGYIGSRCDRCASGFFGNPSDFGGS
CQPCQCHHNIDTTDPEACDKETGRCLKCLYHTEGDHCQLCQHGYYGDALQQDCRKCVCNY
LGTVKEHCNGSDCHCDKATGQCSCLPNVIGQNCDRCAPNTWQLASGTGCGPCNCNAAHSF
GPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGIETPQCDQSTGQCV
CVEGVEGPRCDKCTRGYSGVFPDCTPCHQCFALWDVIIGELTNRTHTFLEKAKALKISGV
IGPYRETVDSVEKKVNEIKDILAQSPAGEPLKNIGILFEEAEKLTKDVTEKMAQVEVKLS
DTASQSNSTAGELDALQAEAESLDKTVKELAEQLEFIKNSDIQGALDSITKYFQISLEAE
KRVNASTTDLNSTVEQSALTRDRVEDLMLERESQFKEKQEEQARLLDELAGKLQSLDLSA
AAEMTCGTPPGADCSESECGGPNCRTDEGEKKCGGPGCGGLVTVAHSAWQKAMDFDRDVL
SALAEVEQLSKMVSEAKVRADEAKQNAQDVLSKTNATKQKVDKSNEDLRNLIKQIRNFLT
EDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVETLSQVEVILQQSAADIARAE
LLLEEAKRASKSATDVKVTADTVKEALEEAEKAQVAAEKAIKQADEDIQGTQNLLTSIES
ETAASEETLANASQRISKLERNVEELKRKAAQNSGEAEYIENVVYSVKQNADDVKKTLDG
ELDEKYKKVESLIAQKTEESADARRKAELLQNEAKTLLAQANSKLQLLEDLERKYEDNQK
YLEDKAQELMRLEGEVRSLLKDISEKVAVYSTCL
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atggaagggcccctctcctctctcccaacatttgcctttttccccctctacctctccaga
aaggaagacacgaagaaaagacaggcagcttgcctgccgcgtcctccttcccgtgtcgcg
acccctcggctgcaaggactggacatggggctgctccaggtgttcgcctttggtgtccta
gccctatggggcacccgagtgtgcgctcaggtacctgaattcagctatggttgcgcggaa
ggcagctgctatcctgccactggcgaccttctcattggccgagcgcaaaagctctccgtg
acctcaacatgcggactgcacaaaccagagccctactgtattgtcagccacctgcaggag
gacaagaaatgcttcatatgcgattcccgagatccttatcatgagacccacaatcctgac
agccatctcattgaaaatgtggtcacaacgtttgctccaaaccgccttaaaatttggtgg
caatccgaaaatggtgtggagaacgtaactatccaactggacctggaagcagaattccac
ttcactcatctcatcatgactttcaagacattccgcccagctgccatgctgatcgagcgg
tcttctgacttcgggaagacttggggcgtgtacagatactttgcctacgactgtgagagc
tcattcccgggcatttccaccggccccatgaagaaagtggatgacatcatctgtgactct
cgatattctgacattgagccctcgaccgaaggagaggtgatatttcgtgctttagaccct
gctttcaaaattgaagatccgtatagtccaaggatacagaatttattaaaaatcaccaac
ttgagaatcaagtttgtgaaactgcacactttgggagataaccttctggattccagaatg
gaaatcagggagaagtactattatgctgtttatgacatggtggttcgaggaaactgcttc
tgctatggccacgccagtgaatgtgcccccgtggatggagtcgatgaagaagtggaagga
atggttcacgggcactgcatgtgccgacacaacaccagaggcttgaactgtgagctgtgc
atggatttctaccacgatttgccgtggagacctgctgaaggccggaacagcaatgcctgc
aaaaaatgtaactgcaacgaacattccagctcatgtcactttgacatggcggtcttcctg
gctactggcaatgtcagcgggggagtgtgtgacaactgtcagcacaacaccatggggcgc
aactgtgagcagtgcaaaccgttctacttccagcaccccgagagggacatccgggacccc
aatctctgcgaaccatgcacctgtgacccagctggttctgagaatggaggaatctgtgac
ggttacactgatttttctgtgggtctcattgctggtcagtgtcggtgcaaattgcacgtg
gagggagagcgctgtgatgtttgtaaggaaggcttctatgacctgagtgctgaagaccca
tatggctgtaaatcatgtgcttgcaatcctctgggaacaattcctggtgggaatccgtgt
gattctgagactggctactgctactgtaagcgcctggtgacagggcagcgctgtgaccag
tgtctgccacagcactggggcttaagtaatgatttggatggatgtcgaccttgtgactgt
gaccttggaggggcgttgaacaatagctgctccgaggactccggccagtgctcctgcttg
ccccacatgattgggcggcaatgtaacgaggtcgagtccggttactacttcaccaccctg
gaccactacatctatgaagccgaggaagccaatctggggcccggagtcgtggtggtggaa
aggcagtacattcaggaccgcattccttcctggacaggacctggcttcgtccgagtgcct
gagggggcttatttggagtttttcattgacaacataccatattccatggagtatgaaatc
ctaattcgctatgagccacagctgccggaccactgggagaaagctgtcatcacggtacag
cggccggggaagattccaaccagcagccgatgtggtaacactgttcctgatgatgacaac
caggtggtgtccttgtcaccgggttcaagatacgttgtcctccctcgccctgtgtgcttt
gagaagggcatgaactacacggtgaggttggagctgccccagtatgctgcgtcgggcagt
gatgtggagagcccgtacacactcattgactcacttgttctcatgccctactgtaaatcg
ctggacatcttcactgttggaggctcaggagatggggaggtcaccaatagtgcctgggaa
accttccagcgctacaggtgtttggagaacagccgtagtgtggtaaaaacacctatgacg
gacgtctgcagaaacatcatcttcagcatttctgccttgattcaccagacgggccttgct
tgtgaatgtgaccctcaaggttctctgagttctgtgtgtgaccccaacggtggccagtgt
cagtgccgccctaacgtggttggaagaacctgcaacaggtgtgcaccaggcaccttcggc
ttcggccccaacggatgcaaaccttgtgactgccatcttcaaggttctgtcagcgccttc
tgtgacgccatcactggccagtgccactgtttccagggcatatatgctcggcagtgtgac
cgatgtctccctgggtattggggctttcccagctgccagccctgccagtgtaatggtcat
gctgaagactgcgacacagtgacagggcagtgtctgagctgtcaggactataccacaggc
cacaactgcgaaaggtgcctggctggttactatggtgatcccgtcattgggtcaggagac
cactgtcgcccttgcccttgtcctgatggtcctgacagtgggcgccagtttgccaggagc
tgttatcaagaccctgtcactctccaacttgcatgtgtgtgcgatcctggatacattggc
tccagatgtgatcgctgtgcctctggattttttggcaatccctcagactttgggggttca
tgtcagccgtgtcagtgtcaccacaacattgacactacggatccagaagcctgtgacaag
gagaccggaagatgcctcaagtgcctgtaccacacggaaggggaccattgccagctctgc
cagcatgggtactacggtgatgctcttcaacaagactgtagaaagtgtgtctgcaattac
ctgggcaccgtgaaggagcattgtaatggctctgactgccattgtgacaaagccactggt
cagtgctcgtgtcttcccaatgtgatcgggcagaactgtgaccggtgtgcgcccaacacc
tggcagctggctagcgggactggctgtgggccctgtaactgcaatgctgcacactccttt
gggccatcctgcaatgagtttacagggcagtgccagtgtatgccgggctttggaggccga
acctgcagcgagtgccaggagctcttctggggagaccccgatgtggaatgccgagcctgt
gactgtgatcccaggggcattgagacaccacagtgtgaccagtccacaggccagtgtgtc
tgtgtggagggcgtggagggtcctcgctgtgacaagtgtaccagagggtactcgggggtc
ttccctgactgcacaccctgccaccagtgctttgctctctgggatgtgatcattggtgag
ctgaccaacaggacccacacattcctggagaaagccaaggctctgaaaatcagtggtgtg
attggtccctaccgagagaccgtggactctgtggagaagaaagtcaatgagataaaagac
atcctggcccagagcccagcaggggaaccactgaaaaacattggtattctctttgaggag
gcagagaaattaaccaaagatgtcacagaaaagatggctcaagtagaagtgaaattatct
gatacagcttcacagagtaacagcacagctggagagctagatgcactgcaggcagaagca
gagagccttgacaagaccgtgaaagagctggcagaacaactggaatttatcaaaaactcc
gatattcagggtgccttggatagcatcaccaagtatttccagatctctctcgaggcagag
aagagggtgaacgcctccaccacagacctcaacagcacagtggagcagtctgccctcacc
cgagacagagtagaagatctgatgttggagcgagagtctcaatttaaggagaagcaggag
gaacaggcacgccttctggatgaactggccggcaaactgcaaagtctagacctgtctgct
gctgcggagatgacctgtggaacgcctccaggggctgactgttctgaaagtgaatgtggt
ggccccaactgcagaactgacgaaggagagaagaagtgtggggggcctggctgtggtggt
ctggtcactgtggcccatagtgcctggcagaaagccatggattttgaccgtgatgtcctg
agtgccctggctgaagtagaacagctctccaagatggtctctgaagcaaaagtgagagcg
gatgaggctaagcagaatgctcaggatgtcctgtcgaaaacaaatgctaccaaacaaaaa
gtggacaagagcaatgaggacctaaggaacctcatcaagcagatcagaaactttttgact
gaggatagcgctgatctagacagtattgaagccgttgctaatgaagtactgaaaatggaa
atgcctagcacgccacagcagttacagaacctaacagaagacatccgggaacgagttgaa
accctttctcaagtagaggttattctgcagcagagtgcagctgacattgccagagctgag
ctgttgcttgaagaagctaagagagcaagcaaaagtgcaacagatgtgaaagtcactgca
gacacggtgaaggaagcattagaagaagcagaaaaggcccaggttgcagcagagaaggcg
attaaacaggctgacgaggatatccaaggaacacaaaacctgctaacatcgattgaatct
gagacagcagcgtccgaggaaaccctggccaacgcctcccagcgcatcagcaagcttgag
aggaatgtggaagagcttaagcgtaaagctgcccagaactctggggaggcagaatatatt
gaaaatgtagtatattctgtaaaacagaatgcagacgatgttaagaagactctagatggc
gaacttgatgaaaagtataagaaggtagaaagtttaattgcccaaaaaactgaagagtca
gcagatgccaggaggaaagctgagctgctacaaaatgaagcaaaaacactcttggctcaa
gcaaacagcaaacttcagctgttggaagacttagaaaggaaatatgaggacaatcagaaa
tacttagaagataaagctcaagaattaatgcgactggaaggagaggtccgctcactcctt
aaggacatcagtgagaaagttgctgtttacagcacctgcttataa
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integrated database retrieval system
