Mastomys coucha (southern multimammate mouse): 116080884
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Entry
116080884 CDS
T07224
Symbol
Gen1
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcoc03400
]
116080884 (Gen1)
DNA repair and recombination proteins [BR:
mcoc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
116080884 (Gen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
XPG_I_2
Chromo_SEND1
Motif
Other DBs
NCBI-GeneID:
116080884
NCBI-ProteinID:
XP_031213408
LinkDB
All DBs
Position
Unknown
AA seq
908 aa
AA seq
DB search
MGVNDLWQILEPVKQHIHLQDLGGKTIAVDLSLWVCEAQTVKKMMGTVTKPHLRNLFFRI
SYLTQMNVKLVFVMEGEPPKLKADVISKRTQTRYGPSGKVRPQKTGRSHFKSVLRECLEM
LECLGMPWVQAAGEAEALCAYLNASGHVDGCLTNDGDAFLYGAQTVYRNFTMNTKDPHVD
CYTVSSIKSKLGLDRDALVGLAVLLGCDYLPKGVPGVGKEQALKLLQILKGQSLLQRFNQ
WIEEPCYSVPQSAVKKVAHCSVCSHPGSPKDHERNGCTLCKSDRYCEPHDYEYLCPCEWH
QTDQIRQLNEIENNIKKKACSCEGFPFHEVIQEFLLNKNKMLKPIRYQRPDLLLFQRFTV
QKMEWPSHYACEKLLVLLTRYDMIERKLGRKTSSQLQPIRIVKPRIRSGVHCLEVEWEKP
EHYVVEDTEPGELNLLTVEEASLFEAAYPDVVAIYQKQQSETKGKKQKSMKDKPKGSHLP
ESDDVIISQSLRTLKPTSKAFPKQNPKINLEISPDPVLAQKSTSPSLSSFVSPTSAPCLN
LQEQLMPSPRTLAVKQSKDVNNFLVSECSQPSSSSHDISVITELQLSTIDWAGTSFSNSP
AVQRNTFSQDLQSQSESSAILPGFEQLTYKSEQCTSNNEVSSRDLQKSSPEEHLLSGITA
LHLHDLPLKERIHIKSSCPQYNVGADADQESLPLKMKDSCIAYSSSGGSSHFSKDLTEVY
LHKESRNSKVLDIQLQENCRANTSLPYSFNDKAVKTSSLQAGLPTAAVPHNPKVAVKTTK
NFVMKSSVCLERDSSDEENAPVSWKAKYTAPKMKHSSQKHSLVHIGDSTHNKLRNPIVES
KETRLCTKSYKTAEDEEDRFSDPARNPQSFLPCHNKDEDSPACWESPLPLRQRLKLRFQN
TQSGFYNT
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgaatgacttgtggcaaattttggagcctgtaaagcaacatatccacttgcag
gatcttggtgggaaaaccattgccgttgatttgagtctctgggtatgtgaggcacagacg
gtgaagaaaatgatgggaacggtcacgaagccccacctcaggaacctattttttcgtatt
tcatatttaactcaaatgaatgtaaaactggtgtttgtaatggaaggggagccaccaaag
ctgaaagctgatgtcataagcaagaggactcagactcgttacgggccttctggaaaagtg
agacctcagaaaacagggagatcacattttaagtcagtcttacgagagtgccttgaaatg
ctagagtgcctgggaatgccctgggtccaggctgccggggaagctgaggccctgtgtgct
tacctcaatgccagcggccatgtggatggctgcctcaccaatgacggcgatgctttcctt
tatggagcccagactgtttacaggaatttcactatgaacacaaaggatccacatgttgac
tgttacacagtatcatctatcaagagcaagctaggcttggatcgcgatgctctggttgga
ctggcagtgcttcttggctgtgattaccttccaaagggagtgcctggagttggaaaagag
caagcattaaaacttttgcagattttgaaaggtcaaagcttgcttcagaggtttaaccag
tggattgaagaaccttgctactctgttccacaatcagcagtaaaaaaagtggctcactgc
tctgtgtgctcccatccaggttctcctaaggatcatgaacgtaatggatgcacattatgt
aaaagtgatagatactgcgaaccacatgattatgaatacctctgtccttgtgaatggcac
cagacagaccaaattagacaactaaatgaaatagaaaacaatattaaaaagaaagcttgc
agttgtgaaggatttccattccatgaggtcatccaagaattccttttgaataagaataaa
atgttaaagccaatcaggtaccaaagacctgatttattattgtttcagagatttactgtt
caaaaaatggagtggcccagtcattatgcatgtgaaaaattattggtgcttttgacccgc
tatgacatgatagaaagaaaacttggtagaaagacctccagtcaactacagcccattaga
attgttaaaccccgaatcagaagtggagtccattgtcttgaagtagaatgggaaaagcct
gaacattatgtggtggaagatacagaacctggagaactgaatctccttacagtggaagaa
gcatcgctgtttgaagcagcctatcccgatgttgtagctatctaccagaaacagcagtca
gagactaaagggaagaaacagaaaagtatgaaagataagcctaaagggagccatttacca
gaatcagatgatgtgatcatttctcagtcacttaggactttaaaacctacatctaaagcc
ttccccaagcagaatcccaaaattaatttagaaatctccccagatcctgttttagcacag
aaatccacttctccctcgttgagtagttttgtttcccctacaagtgctccctgtttgaat
ttgcaagaacagttaatgccttctccaagaactttggctgtaaagcaaagtaaagatgtc
aataattttttagtttcagaatgtagtcagcccagctcttcatctcatgatatttctgtg
attactgagctacagttgagtaccattgactgggcaggtacttcttttagtaattctcca
gcagttcaaagaaacactttctctcaagatttacaatcacaatctgaatcatcagccatc
cttcccggctttgaacagctgacatataaatcagaacaatgtacctcaaacaatgaagtg
tccagtagagatcttcagaagagtagtcctgaagagcatctcctttctggcatcactgct
ttacatcttcacgatttgcctctaaaggaaagaatacatataaaatcgtcatgccctcag
tataatgtaggagcagatgctgaccaggaaagtttgccactaaaaatgaaagactcttgt
attgcttacagtagctctggtggctcatcccatttttcgaaggatcttacggaagtttat
cttcacaaagagtccagaaactctaaagttctagacatccaactccaagaaaactgcagg
gcaaatacttctttaccttattctttcaatgacaaagcagtaaagacttccagtcttcaa
gctgggctgccaactgctgctgtaccccacaatccaaaagttgctgtgaaaactactaag
aactttgtcatgaagagtagtgtttgcctcgagagagattcctcagatgaagaaaatgct
ccagtgtcctggaaagctaagtatactgctccaaaaatgaaacacagttctcagaagcat
agcctagtccacatcggagacagtactcacaacaaactcagaaatcctatagtagaatct
aaagaaaccagactctgtactaagtcttataaaacagctgaagatgaagaagacaggttc
tcagatccagcaagaaatcctcagagttttctaccatgtcataacaaagatgaggattct
cctgcctgctgggaaagtcctctccctttacgtcagaggttaaaactcaggttccagaac
actcaaagtggattttataatacttaa
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