Mastomys coucha (southern multimammate mouse): 116081190
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Entry
116081190 CDS
T07224
Symbol
Atg2b
Name
(RefSeq) autophagy-related protein 2 homolog B isoform X1
KO
K17906
autophagy-related protein 2
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04136
Autophagy - other
mcoc04140
Autophagy - animal
mcoc05010
Alzheimer disease
mcoc05014
Amyotrophic lateral sclerosis
mcoc05016
Huntington disease
mcoc05017
Spinocerebellar ataxia
mcoc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116081190 (Atg2b)
04136 Autophagy - other
116081190 (Atg2b)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
116081190 (Atg2b)
05014 Amyotrophic lateral sclerosis
116081190 (Atg2b)
05016 Huntington disease
116081190 (Atg2b)
05017 Spinocerebellar ataxia
116081190 (Atg2b)
05022 Pathways of neurodegeneration - multiple diseases
116081190 (Atg2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116081190 (Atg2b)
03029 Mitochondrial biogenesis [BR:
mcoc03029
]
116081190 (Atg2b)
Membrane trafficking [BR:
mcoc04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
116081190 (Atg2b)
Mitochondrial biogenesis [BR:
mcoc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
116081190 (Atg2b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
116081190
NCBI-ProteinID:
XP_031213724
LinkDB
All DBs
Position
Unknown
AA seq
2076 aa
AA seq
DB search
MPWPFSESIKKRACRYLLQRYLGHFLQEKLSLEQLSLDLYQGTGSLAQVPLDKWCLNEIL
ESADAPLEVTEGFIQSISLSVPWGSLLQDNCALEVRGLEMVFRPRPRVATGSEPMYWSSF
MTSSMQLAKECLSQKLTDEQGEASQPFEGLEKFAETIETVLRRVKVTFIDTVLRIEHVPE
NSKTGAALEIRVDRTVYCDETADESSGVNVHQPTAFAHKLLQLSGVSLFWDEFSASAKSS
PVCSTAPVETEPKLSPSWNPKIVYEPHPQLTRTLPEIAPLDPVQIGRLLGKLELSLTLKQ
NEVLPGAKLDVDGQIDSFHLFLSPRQVHLLLDMLAAIAGPENSSKIGLANKDRKNRPMQQ
EDEYRIQMELNRYYLRKDSLSMGVSSEKSFYETEAARTPSSREEEVFFSMADMDMSHSLS
SLPPLGDPPHMDLELSLTSTYTNTPAGSPLSATVLQPTWGEFADHKEQPVRGPAFQPDMV
HPASVQKAALPSRSVSVDESRPEFICRLAIGIFSVSVLHIDPLSPAETSLNVNPLTRMAI
DFFSCIEKMDPAIFSTGDFKSFRVVFAEACSHDHLRFIGTGIKVSYEQRQRSASRHFSTD
MSVGRMEFLECLFPTDCHSVPPHYTELLTFHSKEGTDAHLPVCLQLHYKHSETRGSQGNQ
ARLSSVPQKADLQIKLNPVCCELDISIVDRLNSLLQPQKLTTVEMMASHMYASYNKHISL
HKAFTEVFLDDSHSPANRRVSVQVATPALHLSVRFPIPDLRSDQERGPWFKKSLQKETLH
LEFTDLESKTEFVGGSTPEQTKLELTFRELSGSFQEEKGGPSVKFFHVSGGVDGDTASSD
DFDWPRMVLKINPPAIHSILERIAAEEEEENDGHYQEEEEGGAHSLKDVCDLRRPAPSPF
SSRRVMFENEQMVMPGDPVEMTEFQDKAISNSHYVLELLLPNIHLTLPSKSFYEKLYNRI
FNDLLLWEPTAPSPVETLENASYGIGLSVASQLINTFNKDSFSPFKSAVHYDEDSGSEEE
TLQYFSAVDPNYRSRRKKKLDSQNKNSQSFLSVLLSINHGLMAVFTDVKQDNGDLMESKH
GEFWLEFNSGSFFCVTKYEGFDDKHYICLHSSSLRLYHKGIVDGAILPTETRLPSSTRPH
WLEPTIYSSEEDGLSRAASDGVGGDNLNMLSVAVKILSDKSESNTKEFLVAVGLKGATLQ
HRVLPAGLSWHEQILNFLNIADEPVLGYNPPTSFTTFHVHLWSCALDYRPLHLPIRSLLT
VETFSISSSVAVDRSSSTLRIIMDEAALHLSDKCNTVTINLNRDYVRVMDMGLLELTITA
VKSDSDGEQTEPRFELHCSSDVVHIRTCSDSCAALMNLIQYVASYGDLHAPHKAEMKSGV
PQRKPKVDSSARSSSHGPVLPEADQQILRDLMSDAMEEVDLQQASAPVGPQANGVLDEKS
HTQEPCCSDLFLFPDESGNVSQESSPAYPSLTHHLINDTVTGATAENDDFCILFAPKAAV
QEKEEEPVIKIMVDDAIVIKDDYFSLPITRTDSSKAPLHFPIPAIRYVVKEVSLVWHLYG
GKDFATAPPASPAKSYVSPHSSPSQTPTRQGRHTVYGGKGRNHDFLMEIQLSKVKFQHEV
YPPCKPECESSLLEHPVSRQVFIVQDLEIRDRLATSQMNKFLYLYCSKDMPRKAHSNMLT
IKALHVRPESGRSPQECCLRVSLMPLRLNIDQDALFFLKDFFTSLCTEVELLLTPDPEVT
KSPGADVTCSLPRHLSTSKEPNLVVSFPGPKQSSPNHSANPVEDGNGLEEDFSAEEASFS
DQPVFFREFRFTAEVPIRLDYHGKHVSMDQGTLAGILIGLAQLNCSELKLKRLFYRHGLL
GIDKLFSYAITEWLSDIKKNQLPGLLGGVGPMHSLVQLVQGLKDLVWLPIEQYRKDGRIV
RGFQRGAASFGTSTAMAALELTNRMVQTIQAAAETAYDMVSPSTLSLEPKKAKRFPHHRL
AHQPVDLREGVAKAYSVVKEGITDTAQTIYETAAREHESRGVTGAVGEVLRQIPPAVVKP
LIVATEATSNVLGGMRNQIRPDVRQDESQKWRHGED
NT seq
6231 nt
NT seq
+upstream
nt +downstream
nt
atgccttggccattttcagaatctatcaagaagagggcctgtcggtacctcctgcagagg
tacctgggccacttcttgcaggagaagctgagcctggagcagctgagcctggacctgtac
cagggcaccgggtctcttgcccaggtccccttggacaaatggtgcctcaatgaaatcttg
gagtcagcagatgcaccgttagaagtcactgaaggatttattcagtccatttccctgtca
gtcccatggggctccttgctgcaggacaactgtgcactggaagtgagaggactggagatg
gtcttccggcctcgacctcgagtagcaactgggtctgagcctatgtattggtcaagcttc
atgaccagcagtatgcaattggcaaaggagtgtcttagccagaaactgacagatgagcaa
ggagaagcatcccagccttttgaaggactggaaaagtttgcggaaaccatcgaaacagta
ctaagaagagtgaaagtcacttttatagacactgttttaagaattgaacatgtgccagaa
aattccaaaactggagctgcacttgaaatccgcgtagacagaactgtgtactgtgacgaa
acagccgacgagtcctcaggagtcaatgtgcatcagcccacagcttttgctcataaattg
ctgcagctctctggagtgtctctgttctgggatgaattttctgcttcagcaaaatcttcc
cccgtgtgttcaactgcaccagtggaaactgagccaaagctgtcacctagctggaacccc
aaaattgtttatgagccacacccacaactaactagaacattaccagagatagcgcccttg
gatccagtgcagattggaaggctactgggcaagctggagttgagtctcactttaaaacag
aatgaagtgcttccaggagccaagttggatgttgatggacagatagactcctttcatcta
ttcctgtcaccaaggcaggtacacctccttctggatatgttagcagctattgctggacca
gaaaattctagcaaaatagggctagctaataaagacaggaaaaatcgacccatgcagcag
gaagatgagtaccgaattcagatggaattaaaccggtattatctgaggaaagattccctc
tctatgggtgtgtcttcagagaagagcttctatgagacagaagcagctcgcacgccttct
agccgcgaagaagaggttttcttctccatggctgacatggacatgtctcacagtctgtcc
tctctcccaccccttggggacccaccacacatggacctggagctctcgctgactagtact
tacaccaacacacctgcaggatctccgctaagtgctactgtgcttcagccaacttgggga
gaatttgccgaccacaaagaacagccagtaagagggccagcattccaacctgacatggtc
cacccggcatctgtacaaaaagctgctctcccctctaggtctgtttcagtggatgaatcc
agaccggagtttatctgcaggttggctatcggcatattctcggtctctgtgcttcacatc
gatcctctgtctccagcggaaacatctctgaacgtcaatccattgacacgcatggccatc
gatttcttctcttgtatagaaaagatggacccagcaatattttcgacgggagattttaaa
tctttccgagtggtctttgctgaagcttgttcacacgatcaccttagatttataggcact
ggcatcaaagtgtcctatgagcagagacaaaggtcagcttcccggcactttagcaccgac
atgtccgtggggcgaatggagtttttggagtgtctgtttcctacggattgtcattctgtc
cctcctcactacacagagcttctaacgttccattccaaggaagggactgatgcccacctt
cctgtgtgtctccagcttcactataaacactctgagactagaggatcccagggtaatcaa
gcaagacttagttcagttcctcaaaaggcagacttacaaattaaattaaaccctgtgtgt
tgcgagctggatatcagtattgtggataggttaaattccttgcttcaaccgcagaaactc
actacagtggagatgatggcctcacacatgtatgcttcctataacaagcatattagtttg
cacaaggctttcacggaagtgttcctggatgactcgcacagtcccgcaaaccgtcgagtg
tcggtacaagttgccaccccagcactgcacctgtctgttcgcttccctattcccgatctt
cgttcagaccaggaaagaggaccctggtttaagaagtcacttcagaaggagacccttcat
ttagaatttacagatctggagtctaagacggagttcgtgggaggatccaccccagaacaa
acgaaactggaactgactttccgagagctatctgggtcattccaggaggagaagggaggg
ccgtctgtcaagttttttcatgtgtctggtggagtagatggagacacagcatcgtcagat
gacttcgactggccgcgaatggtactgaaaataaatccaccggccatacattccattttg
gagagaatagcagctgaggaagaggaagagaatgatggtcactaccaggaggaggaggaa
ggaggggctcattccctgaaagatgtctgcgacctgaggcggccagccccgtctcccttt
tcctctcgtagagtaatgtttgagaatgagcagatggtgatgccgggagaccctgtggag
atgacagagtttcaggataaagccatcagcaattcacactatgtgctggagcttctgcta
cccaacatccacctgacactgcccagcaaaagcttctacgagaagctctacaacaggatc
ttcaatgacttgcttctctgggagccaaccgctccttcaccagtggagactcttgaaaat
gcttcctatggcattgggctctccgtggccagtcagctgataaacaccttcaacaaagac
agcttcagtccctttaagtctgctgttcactatgatgaagacagtggatctgaagaagag
actttgcagtatttttctgctgttgatcccaactatcgttcccgtaggaaaaaaaagttg
gactctcagaacaagaactctcagagcttcctctcagtgcttctgagtatcaatcatgga
ctaatggcagtgttcactgatgtaaagcaagataatggagatctgatggaaagtaagcat
ggtgaattctggttagaattcaatagcggctcgttcttctgcgtgacgaagtatgagggc
tttgatgacaagcactacatctgcttgcattccagcagcctcaggctgtaccacaaaggc
atagtagatggagccattctccctacagagacgcgcttgccatcttccacccggccacac
tggctggaacctaccatttattcctctgaagaagatggccttagccgagctgcctcagat
ggagttgggggagacaatttgaatatgctgtcagtcgcagtgaagatactatctgataaa
tccgagtccaacacaaaggagttcctcgtggctgtggggctaaaaggagccactctacag
cacagggtgctgcctgccggactcagttggcacgagcagattttaaacttcttgaatatt
gctgatgaacctgttttgggatataaccctccaacttcatttacaactttccatgtccat
ctttggagctgtgcccttgattacaggccccttcacctgccaatccgatcccttcttact
gttgagacgttcagcatttctagcagcgttgcagtggatagatcttcctccactctcaga
atcatcatggatgaggctgctttacacctgtcggacaagtgtaacactgtcactataaac
ctgaatagagattatgttcgtgtgatggacatgggacttttagagctcaccataactgca
gtaaaatcagattctgatggagaacagactgagccccgctttgagttgcactgctccagc
gacgttgtccacattagaacatgctcagactcgtgcgctgcgctgatgaatctcattcag
tatgtcgcaagttacggggacctacatgcacctcacaaagcagagatgaaatctggagtc
ccacagagaaagcccaaggtagattccagcgctcggtcatcttcacatggtccagtgctt
cctgaagccgatcagcagattttacgggacttgatgagtgatgccatggaggaggttgat
ctgcagcaggcctctgcccccgtcggaccacaggctaatggtgtcctggatgaaaagtct
catactcaggagccgtgctgctcagacctcttcctgttcccagatgagagtgggaatgtg
tcccaggagtccagccctgcctatccgtcactcactcaccacttgatcaatgacacggtg
acaggtgcgaccgctgaaaacgatgacttctgtattctttttgcaccaaaagcagccgtc
caggagaaggaagaagagccagtgataaaaatcatggttgacgatgccattgtgataaaa
gatgactatttcagtctgcccatcacgaggacggacagcagcaaagcgccgctccacttt
cccatccctgccatccgctatgttgttaaagaggtttccctggtgtggcacctttatggg
ggcaaggactttgcaacagctcctccagcttctccagctaagagttacgttagtccccat
agctcaccttctcaaacacctacaagacaaggacgtcacacagtctatgggggcaaagga
aggaaccatgactttttaatggaaatacagttaagcaaggtgaagtttcagcatgaagtc
taccctccatgcaagcctgagtgcgagtccagcctcttagaacacccagtctccaggcag
gtgttcattgttcaggatcttgaaattcgagatcggctggcgacatcacagatgaataag
tttttatacctgtattgcagcaaagacatgcctcgtaaagctcattccaacatgctgaca
attaaagcattgcacgtacgtccggagtctggcaggtccccacaggaatgctgcttgaga
gtgtccctgatgcctcttcgcctcaatattgaccaggacgccttgttcttcctcaaggat
ttcttcacaagtctttgtacagaagtggagcttctcctgactccagatccagaagttaca
aagtctcctggagctgatgtcacctgcagtttgccaaggcatttgagtacctcaaaggag
ccaaacctagttgtttcttttcctgggccaaaacaatcttccccaaaccatagtgccaat
ccagtggaggacggtaatggactggaggaggacttctcagctgaggaagcttcatttagt
gaccagcctgtgtttttcagagaattcagattcacagcagaagttcctattcggcttgac
tatcacggcaaacatgtgtcaatggatcagggtacattggctgggattttgattggcctg
gcccagttgaactgttcagagctaaagctgaagaggctcttctatcggcatggtttgcta
ggtattgacaaattgttctcatatgcaatcacggaatggctcagtgacattaagaagaac
cagctaccaggactcctgggaggtgttggccctatgcattcactagtccaattagtgcaa
ggcctgaaggacttggtatggctgcccattgagcaataccggaaggatggccgcatcgtc
agaggcttccagagaggcgctgcttccttcggtacctcaactgcaatggctgccctagaa
ctcacaaacagaatggtccaaaccatacaggcagctgcagagactgcgtatgacatggtg
tctccgagtaccctctcccttgagcccaagaaggcaaagagatttcctcatcaccggtta
gcccaccagcccgtagacctgagggaaggtgtggccaaggcttacagcgttgtaaaagag
ggaatcacagatacagcccagaccatctatgaaacagcggctcgagagcacgagagcaga
ggggtcactggtgctgtgggtgaagtcctacggcagattccaccggcagtggtcaaaccc
ctaattgtagccactgaagcgacatcaaacgtattaggtggcatgagaaaccaaattaga
ccagatgttcggcaggatgaatcacagaaatggcgccacggagaggactga
DBGET
integrated database retrieval system
