Mastomys coucha (southern multimammate mouse): 116081659
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Entry
116081659 CDS
T07224
Symbol
Dcaf13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcoc03009
]
116081659 (Dcaf13)
04121 Ubiquitin system [BR:
mcoc04121
]
116081659 (Dcaf13)
Ribosome biogenesis [BR:
mcoc03009
]
Eukaryotic type
90S particles
Other 90S particles
116081659 (Dcaf13)
Ubiquitin system [BR:
mcoc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
116081659 (Dcaf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_IFT122_1st
ANAPC4_WD40
MIOS_WD40
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
KNTC1_N
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
116081659
NCBI-ProteinID:
XP_031214109
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MKVKMLSRNPDNYVRETKLDIQRVPRNYDPSLHPFEVPREYVRALNATKLERVFAKPFLA
SLDGHRDGVNCLAKHPRSLATVLSGACDGEVKIWNLTKRKCIRTIQAHEGFVRGICTRFC
GTSFFTVGDDKTVKQWKMDGPGYGEEEEPLYTVLGKTVYTGIDHHWKDSVFATCGQQVDI
WDEQRTSPVCSMNWGVDSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKKVILEMR
TNTICWNPMEAFNFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTGKEFVSA
SFDKSIRIFPVDKSRSREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWKANASEKL
GVLTSREKAANDYNQRLKEKFQYHPHIKRIARHRHLPKSIYSQIQEQRVMKEARRRKELN
RRKHSKPGSVPIVSERKKHVVAVVK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaaaatgctgagccggaaccctgacaactatgtccgcgaaaccaagctggac
atacaaagagttccaagaaactatgatcctagtttgcatccttttgaagtcccacgagaa
tatgtaagagctttaaatgctaccaagttggaacgagtgttcgcaaagccattccttgct
tccttggatggtcaccgtgatggagtcaattgcctggcaaagcatccgaggagcctggct
actgtcctttctggggcgtgtgatggagaggttaaaatttggaacctgactaaacgaaaa
tgtatacgaacaatacaagcacatgaaggttttgtacgaggaatatgcactcgcttttgt
gggacttctttttttactgttggagatgacaaaactgtgaagcagtggaaaatggatgga
ccaggctacggagaggaggaagaaccgttgtatacagtgttaggaaagacagtgtatact
ggcattgatcatcactggaaggactcagtctttgccacttgtggacagcaagtagacatt
tgggatgaacaaagaaccagccctgtgtgctcaatgaactggggggttgacagtataagt
agtgttaaatttaaccctattgagacatttctcttgggaagttgtgcttctgatagaaat
atagtactgtatgatatgcggcaagctactcctttaaaaaaggttatcctggaaatgaga
acaaatacaatctgttggaaccctatggaagctttcaattttactgcagcaaatgaagat
tataacttgtatacttttgatatgcgtgcactggatactcctgttatggtccacatggat
cacgtgtctgcagtgcttgatgtggactactctccaactgggaaggaatttgtgtctgct
agctttgataagtctattagaatctttcctgtggataaaagccgcagcagggaagtgtac
catacaaaacgaatgcaacatgtgatttgtgtgaaatggacttctgacagcaagtacatt
atgtgtgggtctgatgaaatgaacatccggctgtggaaagctaatgcgtctgaaaaattg
ggtgtgcttacatcacgagaaaaagcagcaaatgattataaccagaggttaaaggaaaaa
tttcagtaccatccgcatataaaacggattgctcgccaccgccatctaccaaaatctatc
tacagccagattcaggagcagcgcgtgatgaaggaagctcggcgccgaaaggaattgaat
cgtcgtaaacatagcaagcctggatctgtgccaattgtgtcagagaggaagaaacacgta
gtggcggttgtgaaataa
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