Mastomys coucha (southern multimammate mouse): 116081716
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Entry
116081716 CDS
T07224
Symbol
Cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcoc03016
]
116081716 (Cdkal1)
Enzymes [BR:
mcoc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
116081716 (Cdkal1)
Transfer RNA biogenesis [BR:
mcoc03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
116081716 (Cdkal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
116081716
NCBI-ProteinID:
XP_031214215
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MPSASCDVRLDDIEDIISQEDSKPQDRHFSRKHVFPKVRRRNTQKYLQEEPRPPSDSTIP
GIQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASDADLWLLNSCTVKNPAEDHFRN
SIKKAQEENKKVVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQ
KKDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGNLASYPTDELVER
AKQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEH
LEEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKRVVDFLKEKVPGITIATD
IICGFPGETDEDFQETVKLVEEYKFPSLFINQFYPRPGTPAAKAKQVPAHVKKQRTKDLS
RVFHSYSPYDHKIGERQQVLVTEESFDSKFYVAHNRFYEQVLVPKNPAFMGKMVEVDIYE
SGKHFLKGQPVSETRVYTPSISKPLAKGEVSGLTKEFRTRLGNPLNATTDTCPATQHGSA
DSRMVLQMSHCDCALKVAAGLALLALLLHFWPESMLTM
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgcatcctgtgatgtacggctggatgacatagaagatatcatatcacaggaa
gattcaaagccacaagacagacatttctcaagaaagcatgtgtttcctaaagtacgaagg
cggaatactcaaaaatatttgcaagaagagcccaggccaccaagtgacagcactattcca
ggcatacagaaaatttggataagaacatggggctgctcacataataattcagatggagaa
tacatggctggacagctggctgcctatggctataaaattacagaaaatgcatcagatgca
gatttgtggctcctgaatagctgtactgtgaaaaatccagctgaggaccactttagaaac
tcaatcaaaaaagctcaagaggagaataagaaagttgtcctcgctggctgtgttccccaa
gcccagcctcgtcaggactacctcaaaggactgagcatcatcggggttcaacagatagat
cgtgtggtagaagttgtggaggaaacaataaaaggtcactcagtgaggctcctgggccag
aagaaagacaatgggaagcggttgggtggagcaagacttgatttgccgaagatcagaaag
aatccgctgatagaaatcatttccatcaacacggggtgtctcaatgcttgtacctactgc
aaaactaaacatgccagaggaaacctggccagctatcccactgatgaacttgtggagaga
gccaagcagtcctttcaggagggtgtttgtgagatatggctgaccagtgaggacaccggg
gcctatggcagagacattggcacagatctccccacactcctgtggaagttggtggaagtg
attcctgagggagccatgctgaggctgggcatgacaaatccaccatatattttagagcat
ctggaggaaatggcaaaaatcctcaaccaccctagggtctacgctttcctccacatccca
gtgcagtccgcctccgacagtgtgctcatggacatgaagagagagtactgcgtggccgac
ttcaaaagagttgtggattttctcaaggagaaggttcctggaataacgattgctacggat
attatctgtggttttcctggagaaaccgatgaggattttcaagaaacagtgaaacttgtt
gaagagtacaaatttccaagcctcttcatcaaccagttttatccaagaccaggaactccc
gctgctaaagccaaacaggttccagcacacgtgaaaaaacaaaggacaaaagatctttct
cgggtgtttcattcctacagtccatatgatcacaagattggcgaaagacaacaagtgcta
gtcaccgaagagtcttttgactccaagttttatgttgcacataaccgattctatgagcag
gttttagtgccaaagaaccctgcattcatggggaaaatggttgaagtcgacatttatgaa
tcaggaaaacactttttaaaaggacagccagtatcagaaaccagagtgtatacaccgtcc
atcagcaagccactggccaagggagaagtctcaggtttgacaaaggaattcagaactaga
cttgggaatcccttgaatgcaactacagacacctgtcctgcaactcagcatggctcggca
gattccagaatggtgctgcagatgtcccactgtgactgtgcactgaaggtggctgcaggc
ctggctctccttgctctccttttgcatttctggccagagtctatgcttacaatgtaa
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