Mastomys coucha (southern multimammate mouse): 116082072
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Entry
116082072 CDS
T07224
Symbol
Prph
Name
(RefSeq) peripherin isoform X1
KO
K07607
peripherin
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc05014
Amyotrophic lateral sclerosis
mcoc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116082072 (Prph)
05022 Pathways of neurodegeneration - multiple diseases
116082072 (Prph)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mcoc04812
]
116082072 (Prph)
Cytoskeleton proteins [BR:
mcoc04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
116082072 (Prph)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
BLOC1_2
Baculo_PEP_C
DUF3944
Laminin_II
Motif
Other DBs
NCBI-GeneID:
116082072
NCBI-ProteinID:
XP_031214743
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MPSSASMSHHSSGLRSSISSTSYRRTFGPPPSLSPGAFSYSSSSRFSSSRLLGSGSPSSS
ARLGSFRAPRAAALRLPSERLDFSMAEALNQEFLATRSNEKQELQELNDRFANFIEKVRF
LEQQNAALRGELSQARGQEPARADQLCQQELRELRRELELLGRERDRVQVERDGLAEDLA
ALKQRLEEETRKREDAEHNLVLFRKDVDDATLSRLELERKIESLMDEIEFLKKLHEEELR
DLQVSVESQQVQQIEVEATVKPELTAALRDIRAQYENIAAKNLQEAEEWYKSKYADLSDA
ANRNHEALRQAKQEMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAG
AARLEEELRQLKEEMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVHSFASL
SLKTTVPEVEPLQDSHSKKMVLIRTIETRDGEVVTESQKEQHSELDKSSIRSY
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgccatcttccgccagcatgagccatcactcgtcgggcctccggtccagcatcagctcc
acctcgtaccgccggaccttcgggccgccgccctcactgtcccccggggctttctcctac
tcgtccagctctcgcttctccagcagccgcctgctgggctctgggtccccgagctcctcg
gcgcggctgggcagcttccgtgcccctcgagcggcggccctgcgcttgccctcggagcgc
ctcgacttctccatggccgaggctctcaaccaggagttcctggccactcggagcaacgag
aagcaggagctacaggagctcaacgaccgcttcgccaacttcatcgagaaggtgcgcttc
ctggagcagcagaacgcagccctgcgcggggagctgagccaggcgcggggccaggagccg
gcgcgcgccgaccagctgtgccagcaggagctgcgcgagctgcggcgcgaactggagctg
ctgggccgggagcgcgaccgggtgcaggtggagcgcgatgggctggcggaggacctggcg
gcgctcaagcagaggttagaagaagaaacccgtaagcgggaggacgcggagcacaacctg
gtgctcttccgtaaggatgtggatgacgccacgctgtcccgcctagaactggagcgcaag
attgagtctctgatggatgaaattgagttcctcaagaagctacacgaagaggagcttcga
gacctgcaggtgagcgtggagagccagcaggtgcagcagatagaggtagaggcaacagta
aagccagagctgaccgcggcgctgagggacatccgcgcacagtatgagaacatcgcggcg
aagaatctgcaggaagcagaggagtggtataagtcaaaatatgctgacctgtccgacgcc
gccaaccgtaaccatgaggccctgcgccaggccaagcaggagatgaacgagtcccgacgt
cagatccagagtctgacgtgcgaggtggacgggctgcgtggcacgaacgaggcgctgctc
agacagctgcgggagctggaggagcagttcgccctggaggctggagggtaccaagcaggc
gcagcacggctggaggaagagcttcgacagctgaaggaagagatggcgaggcacctgcga
gagtaccaggagctcctcaatgtcaagatggccctggacatcgagattgccacctacagg
aagctactggaaggggaggagagccggatctcagttccggttcattcctttgcctctcta
agtttaaagacgactgtgcctgaggtggagcctctccaggatagccatagtaagaagatg
gttctgatcaggacgatcgagactcgggatggggaggtggtgacagagtcccagaaggag
cagcacagtgaactggacaagtcttctatccgcagttactga
DBGET
integrated database retrieval system
