Mastomys coucha (southern multimammate mouse): 116082265
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Entry
116082265 CDS
T07224
Symbol
Irf4
Name
(RefSeq) interferon regulatory factor 4 isoform X1
KO
K09445
interferon regulatory factor 4
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04659
Th17 cell differentiation
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
116082265 (Irf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcoc03000
]
116082265 (Irf4)
Transcription factors [BR:
mcoc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
116082265 (Irf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
MH2
TadF
Motif
Other DBs
NCBI-GeneID:
116082265
NCBI-ProteinID:
XP_031215004
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MNLETSSRGSEFGMSAVSCGNGKLRQWLIDQIDSGKYPGLVWENEEKSVFRIPWKHAGKQ
DYNREEDAALFKAWALFKGKFREGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISD
PYKVYRIVPEGAKKGAKQLTLEDTQMAMGHPYSMTAPYGSLPTQQVHNYMMPPHDRSWRD
YAPDQSHPEIPYQCPVTFGPRGHHWQGPSCENGCQVTGTFYACAPPESQAPGIPIEPSIR
SAEALALSDCRLHICLYYRDVLVKELTTSSPEGCRISHGHTYDVSNLDQVLFPYPDDNGQ
RKNIEKLLSHLERGLVLWMAPDGLYAKRLCQSRIYWDGPLALCSDRPNKLERDQTCKLFD
TQQFLSELQVFAHHGRPAPRFQVTLCFGEEFPDPQRQRKLITAHVEPLLARQLYYFAQQN
SGHFLRGYELPEHINTPDYHRSLRHSSIQE
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaacttggagactagcagccggggctcagagttcggcatgagcgcagtgagctgcggc
aacgggaaactccgacagtggttgatcgaccagatcgacagcggcaagtaccccgggctg
gtgtgggagaacgaggagaagagcgtcttccgcatcccgtggaaacacgcgggcaagcag
gactacaatcgtgaggaggacgccgccctcttcaaggcttgggcactatttaaaggcaag
ttccgagaagggatcgacaagccagatcctcctacttggaagacaagattacgatgtgct
ctgaacaagagcaatgactttgaggaactggtagagaggagccagctggatatctctgac
ccatacaaagtgtacaggattgttccagagggagccaaaaaaggagcaaagcagctcact
ctggaagacacacagatggccatgggccacccctactccatgacagcaccttatggctct
ctgccaacccagcaggttcataactacatgatgccaccccatgacaggagctggagggat
tatgcccctgaccagtcacacccagaaatcccatatcaatgtcctgtgacgtttggccca
cgtggccaccactggcaaggcccatcttgtgaaaatggttgccaggtgacaggaaccttt
tatgcttgtgccccacctgagtcccaggctcctggaatccccattgagccaagcataagg
tctgctgaagccttggcgctctcagactgccggctgcatatctgcctgtattaccgggat
gtcctcgtgaaggagctgaccacgtccagccccgaaggctgccggatctcccatggacat
acctatgatgttagcaacctggaccaggtcctgttcccctacccagatgacaatggccag
aggaagaacattgagaagttgctgagccacctggagaggggactggtcctctggatggct
ccagatgggctttatgccaaaagactctgccagagcaggatctactgggatgggcctctg
gcgttgtgcagtgatcgacccaacaaactagaaagagaccagacttgcaagctctttgac
acacagcagtttctatcagagctgcaagtgtttgctcaccacggccggccagcaccgaga
ttccaggtgactctgtgctttggtgaggagtttccagaccctcagagacagaggaagctc
atcacagctcatgtggaacctctgctagccagacaactgtattattttgctcaacaaaac
agtggacatttcctaaggggctacgagttacctgaacacattaacactccagattaccac
cgctccctccgtcattcttccatccaagagtga
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