Mastomys coucha (southern multimammate mouse): 116082577
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Entry
116082577 CDS
T07224
Symbol
Sntb1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04820
Cytoskeleton in muscle cells
mcoc05410
Hypertrophic cardiomyopathy
mcoc05412
Arrhythmogenic right ventricular cardiomyopathy
mcoc05414
Dilated cardiomyopathy
mcoc05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116082577 (Sntb1)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
116082577 (Sntb1)
05412 Arrhythmogenic right ventricular cardiomyopathy
116082577 (Sntb1)
05414 Dilated cardiomyopathy
116082577 (Sntb1)
05416 Viral myocarditis
116082577 (Sntb1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
CR_prot_dom_plant
Motif
Other DBs
NCBI-GeneID:
116082577
NCBI-ProteinID:
XP_031215337
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MAVAAAAVAAPAGGGGARAQRSGLLEVLVRDRWHKVLVNLSEDTLVLSCEEGAAAYNGIG
TATNGSFCRGSGTGHPGTGVAQAPDSPAGVRTAFTDLPEQVPESISNQKRGVKVLKQELG
GLGISIKGGKENKMPILISKIFKGLAADQTQALYVGDAILSVNGADLRDATHDEAVQALK
RAGKEVLLEVKYMREATPYVKKGSPVSEIGWETPPPESPRLGGSSADPLSSQSFSFHRDR
KSIPLKMCYVTRSMTLTDPENRQLEIHSPDAKHTVILRSKDSATAQAWFSAIHSNVGDLL
IRVVAEIREQLGKTGIAGSREIRHLGWLAEKVPGESEKQWKPALVVLTEKDLLIYDSMPR
RKEAWFSPVHSYPLLATRLVHSGPGKGSPQAAMDLSFATRTGTKQGIETHLFRAEISRDL
SHWTRSIVQGCHNSAELTAEITTACTYRNQECRLTIHYDNGFSLSTEPQDGAFPKTIIQS
PYEKLKMSSDDGIRMLYLDFGGKEGEIQLDLHSCPKPIVFIIHSFLSAKITRLGLVA
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcggcagcggctgtggctgcgccggctggcggtggaggcgcccgggcgcag
cggagcggactgctggaagttttggtgcgggatcgctggcataaagttctggtgaacttg
agcgaggacaccctggtgttgagctgcgaggagggcgctgcggcgtacaacggcataggg
actgccaccaatggttccttctgcaggggctccggaaccggtcacccgggcaccggcgtc
gctcaagccccggactctcctgccggggtccgcaccgccttcaccgacctcccggagcag
gtgcctgagtccatctcaaatcagaagcggggcgtgaaggtgctgaagcaggagctgggc
ggactgggcattagcatcaaagggggcaaggaaaacaagatgcccatactcatcagcaag
atcttcaaggggctggcagcggatcagacccaagccctgtatgtgggcgatgccatcctg
tcggtgaacggagcagacctgcgggacgccacccacgacgaggcagtgcaggcactgaag
cgcgcaggcaaggaagtgctgctggaagtgaagtatatgagagaagccacaccttacgtg
aagaaagggtccccagtgtctgagattggatgggaaacacccccacctgagtccccaaga
ttagggggtagctctgcagatcctctgtcatcccagtccttctccttccatagagaccgg
aaaagcatccccctcaagatgtgttatgtcaccaggagcatgaccttgactgaccctgaa
aacaggcagctagaaattcactcgccagatgccaagcacacagtgatcctgaggagtaag
gactctgccactgcccaagcctggttcagtgccattcattccaacgttggtgacttgctg
atccgtgtggttgctgagatcagggagcagctgggaaagacaggcattgctggcagtcgt
gagatcaggcatcttggctggcttgcagaaaaggtgcctggagagagtgagaaacagtgg
aaaccagccctggttgttctgactgagaaagatcttttaatctatgacagcatgccacgg
aggaaagaggcctggttcagccctgtgcattcgtatccacttcttgccaccaggttggtc
cattcaggtccagggaaaggatcaccccaggctgctatggatctgtcctttgcaacacga
actggtaccaagcaaggaattgaaacacatctcttcagggccgagatcagcagggacctc
tcccactggacaaggagcatagtacaggggtgccacaattcagcagagctcactgccgaa
atcaccacagcctgcacctacagaaaccaggaatgccgcttgaccatacattatgacaac
ggattttctctttccactgagcctcaggatggtgcctttcctaagacaattatacagtcc
ccttacgagaagctcaaaatgtcttcggatgatggaatcaggatgctctatttagacttt
ggaggcaaagaaggagagattcaactggaccttcactcctgccccaagccaatcgttttc
atcatccactcctttctgtctgctaagataacacgactgggcttggtggcctga
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