Mastomys coucha (southern multimammate mouse): 116082689
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Entry
116082689 CDS
T07224
Symbol
Kdm1b
Name
(RefSeq) lysine-specific histone demethylase 1B isoform X1
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116082689 (Kdm1b)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
116082689 (Kdm1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
Pyr_redox
Pyr_redox_2
SWIRM
Thi4
DAO
HI0933_like
FAD_binding_3
Pyr_redox_3
FAD_oxidored
FAD_binding_2
NAD_binding_9
Lycopene_cycl
GIDA
2-Hacid_dh_C
AlaDh_PNT_C
NAD_binding_7
Attractin
YjeF_N
Shikimate_DH
zf-RING_2
Glu_dehyd_C
Motif
Other DBs
NCBI-GeneID:
116082689
NCBI-ProteinID:
XP_031215428
LinkDB
All DBs
Position
Unknown
AA seq
826 aa
AA seq
DB search
MAASRGRSKKRSNLELSPDNLPLRSSGRQAKKKAVEITDEDEDGSSEKKYRKCEKAGCTT
AYPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYDKYTAWKRVWTSN
GKTEPSPKAFMADQQLPYWVQCTKPECGKWRQLTKEIQLTPHMARTYRCGMKPNTITKPD
TPDHCSFPEDLRVLEVSNHWWYSMLIQPPLLKDSVAAPLLSAYYPDCVGMSPSCTSTHRA
TITATTTATGNASPGKMEPSKAAPSSLVLGMNRYFQPFYQPNECGKALCVRPDVMELDEL
YEFPEYSRDPTMYLALRNLILALWYTNCKEALTPQKCIPHIIVRGLVRIRCVQEVERILY
FMTRKGLINTGVLTVGAGQHLLPKHYHNKSVLVVGAGPAGLAAARQLHNFGMKVTVLEAK
DRIGGRVWDDKSFKGVVVGRGPQIVNGCINNPVALMCEQLGISMHKLGERCDLIQEGGRI
TDPTIDKRMDFHFNALLDVVSEWRKDKTLLQDVPLGEKIEEIYRAFVKESGIQFSELEGQ
VLQFHLSNLEYACGSSLHQVSARSWDHNEFFAQFAGDHTLLTPGYSTIIEKLAEGLDIRL
KSPVQSIDYTGDEVQVTTTDGMGHSAQKVLVTVPLAILQRGAIQFNPPLSEKKMKAINSL
GAGIIEKIALQFPFRFWDSKVQGADFFGHVPPSASQRGLFAVFYDMDPQQSVLMSVITGE
AVASLRTMDDKQVLQQCMGILRELFKEQEIPDPTKYFVTRWNTEPWIQMAYSFVKTFGSG
EAYDIIAEEIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIAAF
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggcggcatctcgagggaggtcaaagaagagaagcaatttggagctttctcctgataac
ctgcctttgaggagctctgggcggcaggcaaagaagaaagcagtagagatcacggatgaa
gatgaggatggttcgtcggagaagaagtacaggaaatgtgaaaaggcaggctgtacaaca
gcatatcctgtgtgctttgcgagcgcttctgaaagatgtgccaaaaatggctatacctcc
cgatggtatcacctctcctgtggggaacacttctgcaatgaatgctttgaccactactac
agaagtcacaaagatggctatgacaaatacactgcatggaaaagagtgtggaccagcaat
ggcaagacggagccaagccccaaagcattcatggcagaccagcagctgccctactgggtt
cagtgcacaaaacctgagtgtggaaagtggaggcagcttaccaaggaaatccagcttact
ccacacatggcgaggacttaccgctgtggcatgaagccaaatactattaccaagcctgac
acccccgatcattgttctttccccgaggatctgagagtgctggaggtttccaaccactgg
tggtactccatgctcatccagcctccattgctgaaggacagcgtggcagcgccactgctc
tctgcctactaccctgactgcgttggcatgagcccctcctgcaccagcacacatcgtgcc
accatcacagccactaccaccgccactggcaatgccagcccgggaaagatggagccctcc
aaggcagccccctcttcacttgttctaggcatgaaccggtacttccagccattctaccag
cccaacgagtgtggcaaagctctgtgtgtgaggccagatgtgatggagctggatgagctc
tatgagtttcctgagtattctcgagaccccaccatgtacctggctttgcgaaacctcatc
ctcgctctatggtacacaaactgcaaagaagctcttacccctcagaagtgcattccccac
atcattgtccggggccttgtacgcatccgatgtgttcaggaagtggagaggattctttac
ttcatgacaagaaaaggcctcatcaacacgggagtgctcaccgtgggagctggccagcat
cttcttcctaaacactaccataataaatctgttctggttgttggggctggtcccgcaggc
ttagcagctgctaggcaactacataactttgggatgaaggtgactgtcctggaagccaaa
gaccggattggaggccgagtatgggatgacaagtcctttaaaggcgtggtagtaggaaga
ggaccccagattgtcaatggctgtattaataacccagtagcactaatgtgtgagcaactt
ggcatcagcatgcataagttgggagagagatgtgacttaattcaggaaggtggacggata
actgaccccactattgacaagcgcatggattttcattttaatgctctcttggatgttgtc
tctgagtggaggaaggataagactctgctccaagatgtccctttaggagagaagatagag
gagatctaccgagcttttgtgaaggagtctggcatccagttcagcgagctggagggacag
gtgctgcagttccacctgagtaacctggagtatgcttgtggcagcagcctgcaccaggtg
tctgctcgctcctgggatcacaatgaattctttgcccagtttgctggtgaccatactctc
ctgacgccaggctactccactatcattgagaaactggctgaagggctagacattcgactc
aaatctccagtgcaaagtatagattatactggagatgaagtgcaagttaccacaacagat
ggtatggggcattctgcacaaaaggtattagtcactgtgccattggccatactacagaga
ggcgccatccagtttaatccaccactgtctgagaagaagatgaaggccatcaacagcttg
ggtgcaggcatcattgaaaagatcgccttgcagtttccatttagattttgggacagtaaa
gttcaaggggctgacttttttggccatgttcctccaagtgctagccagagagggctcttc
gctgtattctatgacatggaccctcagcagagtgtactgatgtcggtgattacgggggag
gcagtggcatccctcagaaccatggatgacaagcaggtgctgcagcagtgcatgggcatc
cttcgggagctgttcaaggaacaggagatcccagatcccacaaagtattttgtcacacgg
tggaacacagagccatggatccagatggcatatagttttgtgaagacctttggaagtggc
gaggcctacgacattattgctgaagaaatacaaggaactgtcttttttgctggtgaggca
acaaacaggcatttcccacaaactgttactggggcatatttgagtggtgttcgagaagcg
agcaagattgcagccttttaa
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