Mastomys coucha (southern multimammate mouse): 116082710
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Entry
116082710 CDS
T07224
Symbol
Nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03013
Nucleocytoplasmic transport
mcoc03250
Viral life cycle - HIV-1
mcoc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116082710 (Nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116082710 (Nup153)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116082710 (Nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116082710 (Nup153)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116082710 (Nup153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
116082710
NCBI-ProteinID:
XP_031215468
LinkDB
All DBs
Position
Unknown
AA seq
1463 aa
AA seq
DB search
MASGAGGIGGGGGGKIRTRRCHQGPVKPYQQGRPQHQGILSRVTESVKNIVPGWLQRYFN
KSENACSCSPDADEVPPWPENREDEHVIYADENTNTDDGRITPEPAGSNTEEPSTTSTAS
NYPDVLTRPSLHRSHLNFSVLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDDN
ISTTSGFSSRASEKDIAVSKNTSLPPLWSPEAERSHSLSQHTAISSKKPAFNLSAFGTLS
TSLGNSSILKTSQLGDSPFYPGKTTYGGAAAAVRQNKVRSTPYQAPVRRQMKAKQLNTQS
YGVTSSTARRILQSLEKMSSPLADAKRIPSAVSSPLNSPLDRSGIDSTVFQAKKEKVDSQ
YPPVQRLMTPKPVSIATNRTVYFKPSLTPSGDLRKTNQRIDKKNSTVDEKNISRQNREKE
SGFSYPNFSIPAANGLSSGVGGGGGKMRRERTHFTAPKPPEDEEMEAPLLPQISLPISSS
SLPTFSFSSPVISASSSPVNSSQPLPNKVQMTSLGSTGSPVFTFSSPIVKSTQADVLPPA
SIGFTFSVPLAKTELSGSNSSSEKVLSSSAQDNTVVNSSSYKKRSAPCEDPFAPAKILRE
GSVLDILKTPGFMSPKVDSPALQPTTTSSIVYTRPAISTFSSSGLEFGESLKAGSSWQCD
TCLLQNKVTDNKCIACQAAKLPLKETAKQTGIGTPSKSDKPASTSGTGFGDKFKPAIGTW
DCDTCLVQNKPEAVKCVACETPKPGTGVKRVLTLTVASESPVTASSSTTVTTGTLGFGDK
FKRPVGSWECPVCCVFNKAEDSRCVSCSSEKPGLAPASGSSPVPVSLSSGGCLGLDKFKK
PEGSWDCEVCLVQNKADSSKCIACESAKPGTKSEFKGFGISSSLNPAPSAFKFGIPPSSS
GLSQTLTSTGNFKFGDQGGFKLGTSSDSGSTNTMNTNFKFSKPTGDFKFGVLSDSKPEEI
KNDSKNDNFQFGSSSGLSNPASSAPFQFGVSTLGQQEKKEELPKSSSAGFSFGAGVNNPP
NAAIDTTVTSENKSGFNFGTVDTKSVSVTPFTYKTTEAKKEDASATKGGFTFGKVDSASL
PSASMFVLGRTEEKQQEPVTSTSLVFGKKADNEEPKCQPVFSFGNSEQTKDESSSKPTFS
FSVAKPSVKEPDQLAKATFAFGNQTNTTTDQGAAKPVFSFLNSSSSSSSAPATSSSGGIF
GSSTSSSNPPVAAFVFGQASNPVGSSAFGNSAESSTSQSLLFPQDSKPATTSSTASAASP
FVFGTGASSNSTVSSGFTFGATTTSSSSGSSFVFGTGHSAPSASPAFGANQTPTFGQSQG
ASQPNPPSFGSISSSTALFSAGSQPVPPPTFGTVSSSSQPPVFGQQPSQTAFGSGTANAS
SVFQFGSSTTNFNFTNNNPSGVFTFGASPSTPAASTQPSGSGGFPFSQSSASFTVGSNGK
NMFSSSGTSVSGRKIKTAVRRRK
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaggagccggaggcataggagggggcggcggcggcaagatccggacgcgtcgt
tgccaccaggggccggtgaagccttaccagcaggggcgaccccagcaccagggcattctt
agcagggttacagaatctgttaagaatattgtaccagggtggctacaaagatacttcaac
aagagtgaaaatgcttgtagctgttccccagatgcagatgaagttccaccctggccggaa
aatagagaagatgagcatgtgatttatgcggatgagaacacaaacactgatgatgggaga
atcacccctgagcccgcaggcagtaacacagaagaaccatcaactaccagtactgcttca
aattatccagatgtgttaacgagaccttctcttcatcggagtcatctgaatttctccgtg
ttggaatcccctgctttgcactgtcagccatccacgtcctctgcgttcccaattggcagt
tctggattttccctggtgaaggagatcaaagattctacctctcagcatgatgatgataac
atctcaactaccagtgggttctcttcaagagcttctgagaaagatatagctgtttcaaag
aatacttccctgccacctttgtggtccccagaagcagaacgttctcattcactctcacaa
catactgccatcagctccaaaaaaccagcattcaacttgtctgcctttggaacactttcc
acctcacttgggaattcttcaattcttaaaacaagtcagcttggagactctcctttttat
cctggcaaaacaacatatggtggggcagctgctgctgtaagacagaataaagtacgaagc
acaccttaccaggctccagttagaagacagatgaaagctaagcagctcaatacacagtct
tatggtgtgaccagttcaactgcacggcggatattgcaatcgttagaaaagatgtcaagc
cctcttgcggatgcaaaaagaattccatctgctgtttcttctcctctgaattctcctctt
gataggagtgggatagatagcacagtttttcaggcaaaaaaagaaaaggtggactctcag
tatccccctgttcagagactaatgaccccaaagccagtttccatagcaacaaatagaact
gtctattttaaaccatctctgaccccatctggtgacttaaggaagactaatcaaaggata
gataaaaagaacagtactgtagatgaaaaaaatatctcaagacaaaatagagagaaagaa
agtggcttttcataccccaatttcagtattcctgcagccaatggtttatcgtctggagta
ggtggtggaggtggcaagatgagaagagagagaacacattttactgctcctaaacctcca
gaggatgaggaaatggaagcaccattgttaccgcaaatctctctaccaatcagcagttct
tcactgcccaccttcagttttagttcccctgtgatctcggcttcttcgtcaccagtcaac
tcttctcagccattaccaaacaaggtacagatgacctctctgggcagcacgggcagtcct
gtgttcacattttcatctcccattgtaaaatctacgcaggcagatgtgctacctccagca
tctattggatttacatttagtgtgcctcttgcaaaaactgaactttctggctctaatagt
tcttcagaaaaagttttaagtagttcagctcaagataacactgtagtgaatagttcaagc
tataagaagcgaagtgccccttgtgaggatccctttgcacctgcaaaaatcctgagagaa
ggaagtgttctagacattctgaaaacacctggtttcatgtcaccaaaagttgattctcct
gctcttcaaccaactaccacaagctcaatagtttatacaagaccagcaataagtactttt
tcttctagtggacttgagtttggagaaagtttaaaagctggatcatcatggcagtgtgac
acatgtctacttcagaacaaagtcacagacaataagtgtatagcctgtcaagcagcaaaa
ctgccactgaaagaaactgctaaacagactggcattgggacaccaagcaaaagtgacaaa
ccagcttcgacatccgggacaggatttggagataaatttaaaccagcaataggaacttgg
gattgtgatacctgtttagttcaaaataagcctgaagcagtaaaatgtgtagcctgtgaa
acacccaagcctggcactggtgtgaaaagagtccttacattgacagtggcttcagaaagt
cctgtgactgcttcctcttctaccactgtgaccactggtacactaggatttggagataaa
ttcaaaaggcctgtgggatcttgggagtgtccagtctgctgtgtttttaataaggcagaa
gatagcagatgtgtctcctgttcatctgagaaaccaggcttggcacctgcctcaggcagc
agccctgtacctgtctctctgtcttctggaggctgtttaggattggacaagtttaaaaag
cccgaaggaagctgggactgtgaagtgtgcctagtgcaaaataaagcagactcttccaag
tgcatagcttgtgaaagtgcaaagccaggcacaaagtctgagtttaaaggctttgggata
tcttcatctttaaatccagcaccctcagccttcaaatttggtatcccaccatcctcttct
ggactttctcaaactttgacaagcactggaaattttaaatttggagatcagggaggattc
aaattaggcacttcatctgactctgggtctacaaataccatgaatacaaactttaaattt
tctaaaccaactggagattttaaatttggagtgttatctgattctaaacctgaagaaatt
aaaaacgacagcaagaacgataattttcagtttggatcttcttctggcttaagcaaccca
gcttcttcagctccatttcagtttggggtatctactcttgggcaacaagaaaagaaagag
gagctgcctaaatcttcatctgcaggctttagctttggtgcaggtgttaataacccccct
aatgctgctattgacaccacagtgacctcagagaacaagagtggcttcaactttggaacc
gtagacactaagagtgtctcagtgactcctttcacatacaagacaacagaagcaaagaaa
gaagatgcatctgctaccaagggtgggttcacatttggtaaagtggactctgcttctttg
ccatctgcctcaatgtttgttttgggaaggacagaggagaaacagcaagaacctgttact
tctacttctctggtatttggaaagaaagccgacaatgaggagccaaagtgtcaaccagta
ttttcctttgggaattcagagcaaaccaaagatgagagttcctccaagccgacattcagt
ttcagcgtggcaaaaccatctgtgaaggagcctgatcagctagccaaggctacttttgca
tttggaaatcaaaccaatacaacaactgatcaaggtgcagcaaagccagtttttagcttc
ttgaacagcagttcctctagttcaagtgcaccggccacttcatccagtggtggcatattt
ggtagttccacctcttcctccaacccacctgtggcagcctttgtgtttggacaggccagc
aatcctgtcggcagctctgcctttggtaactctgccgaatccagtacatctcagtctttg
ctatttcctcaagatagcaagccagccaccacgtccagcactgcctcagctgcctctcca
tttgtatttggaacaggagccagtagtaatagtactgtatcttctgggttcacttttggg
gctacaaccacgtcaagctcttcaggatcctcctttgtatttggcactggacattcagca
ccatctgccagtccagcatttggtgctaaccagactcctacatttggacaaagtcaaggt
gccagccagcctaaccctccaagctttggctctatatcatcttcaacagcattattttct
gctggttctcagcctgtaccaccacctacatttgggacagtgtcaagtagcagccaacct
cctgtgtttggacagcagcctagtcagactgcatttggctctgggacagccaatgccagt
tcagttttccaatttggtagcagcactacaaatttcaacttcacaaacaataatccatca
ggagtgttcacatttggtgcaagtcccagcacgcctgcagcctcaacccagccctcaggt
tcagggggctttccattcagccagtcttcagcatcatttacagtggggtcaaatgggaaa
aatatgttctcttcttctggaacttcagtttctggtcgcaagataaagactgctgttaga
cgcaggaaataa
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