Mastomys coucha (southern multimammate mouse): 116082714
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Entry
116082714 CDS
T07224
Symbol
Vps41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04140
Autophagy - animal
mcoc04148
Efferocytosis
mcoc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116082714 (Vps41)
04148 Efferocytosis
116082714 (Vps41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116082714 (Vps41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116082714 (Vps41)
Membrane trafficking [BR:
mcoc04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
116082714 (Vps41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
zf_RING_Vps8_fungal
Vps39_1
Beta-prop_EML_2
WD40_WDHD1_1st
zf_RING_Vps8
Beta-prop_HPS5
TPR_PEP5_VPS11
zf-RING_5
Beta-prop_RIG_2nd
Frtz
RIG-I_C
Beta-prop_WDR35_2nd
Beta-prop_IFT140_2nd
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
116082714
NCBI-ProteinID:
XP_031215471
LinkDB
All DBs
Position
Unknown
AA seq
853 aa
AA seq
DB search
MAEAEEQETESLEESTDESEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLALG
THYGKVYLLDVQGNITQKFDVSPVKINQISLDESGEHMGVCSEDGKLQVFGLYSGEEFHE
TFDCPIKIIAVHPQFVRSSCKQFVTGGKKLLLFERTWMNRWKSSVLHEGEGNIRSVKWRG
HLIAWANNMGVKIFDITSKQRITNVPRDDISLRPDMYPCSLCWKDSVTLIIGWGTSIKIC
SVKERHASEMRDLPSRYVEIVSQFETEFYISGLAPLCDQLVVLSYVKEVSEKTEREYCAR
PRLDIIQPLPETCEEISSDALTVRGFQENECRDYHLEYSEGESLFYVVSPRDVVVAKERD
QDDHIDWLLEKKKYEEALMAAEISQRNIKRHKILDIGLAYINHLVERGEYDMAARKCQKI
LGKNASLWEYEVYKFKEIGQLKAISPYLPRGDPVLKPLIYEMILHEFLESDYEGFATLIR
EWPGDLYNNSVIVQAVRDHLKKDSQNKTLLKTLAELYTYDKNYGNALEIYLTLRHKDVFQ
LIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHKL
FKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLLS
RMGNSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTHV
DPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQMK
GVLVDEENICESCLSPILPTDAAKPFSVVVFHCRHMFHKECLPMSSMNAPAQYCNICSAK
NRGPGSAILEMKK
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcagaggagcaggaaacggagtctcttgaagaatctacagatgagtcagag
gaagagagtgaagaggaacccaaactgaagtatgaaaggctttccaatggggtgacagag
attcttcagaaggatgcagcaagctgtatgacggtccatgacaagtttttggcactgggt
acacattatggcaaggtttatttacttgacgtccagggaaacatcactcagaagtttgat
gtaagccctgtgaagataaaccagattagcttggatgaaagcggagaacacatgggggtg
tgttcagaggatggcaagctgcaggtcttcggactgtattctggagaagaatttcacgag
actttcgactgtcccattaaaatcattgctgtgcacccacagttcgtgagatccagttgt
aagcagtttgtgaccggtgggaaaaagttgctgctatttgaacggacttggatgaacaga
tggaagtcttctgtcctacacgaaggggaagggaacataaggagtgtgaagtggagaggc
catctgattgcttgggccaacaatatgggtgtgaagatttttgacatcacctcaaagcag
agaatcaccaatgttccccgagatgatataagtcttcgcccagatatgtatccctgcagc
ctctgctggaaggacagtgtgacactcattattggctggggaacttctatcaagatatgc
tcagtgaaggaacgccatgccagtgagatgagggatctgccaagtcgatatgttgagata
gtgtctcagtttgaaacagaattctacattagtggacttgcgcctctctgtgatcagctt
gttgtactttcctacgtaaaggaggtttcagaaaaaacggaaagagaatactgtgcaaga
cctagactggacatcatccagccgcttccggagacttgtgaagagatctcatctgatgct
ttgacagtcagaggctttcaggagaatgaatgtagggattaccacttagaatactctgaa
ggggaatcactcttctacgttgtgagtccaagagatgtcgtcgtagccaaggaacgagac
caggatgatcatatcgactggctccttgagaagaagaaatatgaagaagctttgatggca
gctgaaattagccagaggaacattaaaagacataagattctggatattgggttggcatat
ataaaccacctggtggagagaggagagtatgacatggctgcaagaaaatgccagaaaatt
cttgggaaaaatgcatctctctgggaatacgaagtttacaaatttaaagaaattgggcag
cttaaagcaattagcccctatttacctcgaggggacccagttctgaaaccactcatctat
gaaatgattttgcacgaatttctggaaagtgattatgagggctttgccacattgatcaga
gagtggcctggagatctgtataacaattctgtgatagttcaagcagttcgagaccacctg
aagaaggacagtcagaacaagactttattgaaaacactggcagaattgtacacctatgac
aaaaattacggcaatgctctggaaatatatttaacgttaagacataaagatgttttccag
ctgatacacaagcataatcttttcagctccattaaggataaaattgttttattaatggat
tttgattcagagaaagctgttgacatgcttttggacaatgaagataaaatttcaattaaa
aaagtggtagaagaattagaagacagaccagaactgcagcatgtgtatttgcataagctc
ttcaagagagaccatcataagggacagcgctaccatgaaaaacagatcagtctgtatgcc
gaatatgatcgaccaaacctacttccttttctccgagacagtacccattgcccacttgaa
aaggcacttgagatctgtcaacaaagaaactttgtagaagagacagtttaccttctgagc
cgaatgggaaacagccgaagtgccctcaagatgattatggaggagctgcatgatgttgat
aaagcaattgagtttgccaaggaacaagatgatggggagctctgggaagatctgattctg
tattccatcgacaaaccaccatttatcactggcttgttgaacaacattggcacacatgtg
gaccctattctgctgatccaccgaattaaggaaggaatggagattcccaatttgagagat
tccttggttaaaattctgcaagattataacttgcagattctgcttcgggaaggctgcaag
aaaatcctcgtagctgactcgttgtctttgctgaaaaaaatgcaccgaacccaaatgaaa
ggcgttctggtcgatgaagagaatatctgtgagtcgtgcctttctcccatcctcccaaca
gatgcagcgaagcccttcagtgtggtggtcttccattgtcgccacatgttccacaaggag
tgcctacctatgtcaagcatgaatgctcctgcacagtactgcaacatctgtagtgctaag
aaccgtgggcctgggagtgccatcctggagatgaagaagtag
DBGET
integrated database retrieval system
