Mastomys coucha (southern multimammate mouse): 116083126
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Entry
116083126 CDS
T07224
Symbol
Nipbl
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116083126 (Nipbl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116083126 (Nipbl)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
116083126 (Nipbl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
Cnd3
DNA_repr_REX1B
Motif
Other DBs
NCBI-GeneID:
116083126
NCBI-ProteinID:
XP_031215708
LinkDB
All DBs
Position
Unknown
AA seq
2798 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNSRIAEEVNCLLACRDDN
LVSQLVHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAVLARSPNVFREKSMQNRYVQSG
MMMPQYKLAQNSMHSSPASSNYQQTTISHSPSSRFVPPQTSSGNRFMPQQNSPVPSPYAP
PSPAGYMPYPHPSSYTTHPQMQQASVSSPIVAGGLRNIHDNKVSGPLSGNSANHHADNPR
HGSSDDYLHMVHRISSDDGDSSTMRSTASFPLRSPQPVCSPAGSDGTPKGSRPPLILQSQ
SLPCSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQNEKAAMYDIISSPTKDSTKLTL
RLSRVRSSDMDQQEDMLSGMENSNVSENDIPFNVQYPGQTSKTPITPQDVNRPLNAAQCL
LQQEQTAFLPANQVPVLQQNTSVATKQPQTSVVQNQQQVSQQGPIYDEVELDALAEIERI
ERESAIERERFSKEVQDKDKPLKKRKQDSYPQEAGGATGGNRPASQETGSTGNGSRPALM
VSIDLHQAGRVDSQASITQDSDSIKKPEETKQCNDAPISVLQEDIVGSLKSIPENHPETP
KKKSDSELSKSEMKQNESRLSESKPNENQLGESKSNESKLETKTETPAEELKQNENKTTE
SKQSESAVVEPKQNENRPCDTKPNDNKQNNTRSENTKARPETPKQKAESRPETPKQKSEG
RPETPKQKGDGRPETPKQKSEGRPETPKQKGEGRPETPKHRHENRRDSGKPSTEKKPDVS
KHKQDIKSDSPRLKSERAEALKQRPDGRSESLRRDHDSKQKSDDRGESERHRGDQSRVRR
PETLRSSSRNEHSTKSDGSKTEKLERKHRHESGDSRDRPSGEQKSRPDSPRVKQGDTNKS
RPGFKSPNSKDDKRTEGNRSKVDSNKAHTDNKSEFPSYLLGGRSGALKNFVIPKIKRDKD
GNITQETKKMDMKGEQKDKVEKMGLVEDLNKGAKPVVVLQKLSLDDVQKLIKDREEKSRS
SLKSIKNKPSKSNKGSIDQSVLKELPPELLAEIESTMPLCERVKMNKRKRSTVNEKPKYA
EISSDEDNDSDEAFESSRKRHKKDDDKAWEYEERDRRSSGDHRRSGHSHDGRRSSGGGRY
RNRSPSDSDMEDYSPPPSLSEVARKMKKKEKQKKRKAYEPKLTPEEMMDSSTFKRFTASI
ENILDNLEDMDFTAFGDDDEIPQELLLGKHQLNELGSESAKIKAMGIMDKLSTDKTVKVL
NILEKNIQDGSKLSTLLNHNNDTEEEERLWRDLIMERVTKSADACLTTINIMTSPNMPKA
VYIEDVIERVIQYTKFHLQNTLYPQYDPVYRLDPHGGGLLSSKAKRAKCSTHKQRVIVML
YNKVCDIVSSLSELLEIQLLTDTTILQVSSMGITPFFVENVSELQLCAIKLVTAVFSRYE
KHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDVDGEPMYIQMVTALVLQLIQCVVHLPS
SEKDPNSEEDSNKKVDQDVVITNSYETAMRTAQNFLSIFLKKCGSKQGEEDYRPLFENFV
QDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEMALRVASLDYLGTVAARLRKDAVT
SKMDQGSIERILKQVSGGEDEIQQLQKALLDYLDENTETDPSLVFSRKFYIAQWFRDTTL
ETEKAMKSQKDEESSDATHHAKEIETTGQIMHRAENRKKFLRSIIKTTPSQFSTLKMNSD
TVDYDDACLIVRYLASMRPFAQSFDIYLTQILRVLGENAIAVRTKAMKCLSEVVAVDPSI
LARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLCRPQLAEQYYDMLIERILDTGISVRK
RVIKILRDICIEQPTFPKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPHNDKEAM
TRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDSSYKPVKKACTQLVDNLVEHILKYE
ESLADSDNKGVNSGRLVACITTLFLFSKIRPQLMVKHAMTMQPYLTTKCSTQNDFMVICN
VAKILELVVPLMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSCLGAVVNKVTQNFKFV
WACFNRYYGAISKLKSQHQEDPNNTSLLTNKPALLRSLFTVGALCRHFDFDLEDFKGNSK
VNIKDKVLELLMYFTKHSDEEVQTKAIIGLGFAFIQHPSLMFEQEVKNLYNSILSDKNSS
VNLKIQVLKNLQTYLQEEDTRMQQADRDWKKVAKQEDLKEMGDVSSGMSSSIMQLYLKQV
LEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPAMRNKADQQLVEID
KKYAGFIHMKAVAGMKMSYQVQQAINTCLKDPVRGFRQDESSSALCSHLYSMIRGNRQHR
RAFLISLLNLFDDTAKTEVTMLLYIADNLACFPYQTQEEPLFIMHHIDITLSVSGSNLLQ
SFKESMVKDKRKERKTSPAKENESSESEEEVSRPRKSRKRVDSESDSDSEDDINSVMKCL
PENSAPLIEFANVSQGILLLLMLKQHLKNLCGFSDSKIQKYSPSESAKVYDKAINRKTGV
HFHPKQTLDFLRSDMANSKLTEDVKRSIVRQYLDFKLLMEHLDPDEEEEEGEVSASTNAR
NKAITSLLGGGSPKNNTAADTEDEESDGEDRGGGTSGSLRRSKRNSDSTELAAQMNESVD
VMDVIAICCPKYKDRPQIARVVQRTSSGVSVQWMAGSYSGSWTEAKRRDGRKLVPWVDTI
KESDIIYKKIALTSANKLTNKVVQTLRSLYAAKDGTSS
NT seq
8397 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgccccatgtccccatcactactcttgcggggattgctagtcttaca
gacctcctgaaccagctgcctcttccatctcctttacctgctacaactacaaagagcctc
ctctttaattcacgaatagcagaagaggtgaactgccttttggcctgtagggatgacaat
ttggtttcacagcttgtccatagtctcaaccaggtatcaacagatcacatagaactgaaa
gataaccttggcagtgatgatcctgaaggcgatataccagtcttgttgcaggctgtcctg
gcaaggagtcctaacgttttcagggagaaaagcatgcagaacagatatgtacagagtgga
atgatgatgcctcagtataaacttgctcagaattccatgcacagtagtcctgcatcttcc
aattaccaacaaaccactatctcacatagcccctccagccggtttgtgccaccacagaca
agctctgggaacagatttatgccacaacaaaatagcccagtgcctagtccatatgcccca
ccgagtcctgcaggatacatgccatatccccatccttcaagttacacaacacatccacag
atgcagcaagcatcggtatcaagtcctattgttgctggtggcttgagaaacatccatgat
aacaaagtttctggtccattatccggcaactcagctaatcatcatgctgataaccctaga
catggctcaagtgacgactacctacacatggtgcacaggataagtagtgatgatggcgat
tcttcaacaatgaggagtacggcatcttttcccctaaggtctccacagccagtgtgttct
cctgctggaagtgacgggactcctaaaggatcaagaccacctttaattctacagtctcag
tctttaccttgttcatcacctcgagatgttcctccagatatcttactagattctccagaa
agaaaacaaaaaaagcaaaagaaaatgaaattaggcaaggatgaaaaagaccagaatgag
aaagctgcaatgtatgatataattagctctccaactaaggactccactaaacttacgtta
agactttctcgtgtaagatcttcagatatggaccagcaagaggatatgctatctggtatg
gaaaatagcaatgtttcagaaaatgatattccttttaatgtgcagtatccaggacagact
tcaaaaacacccattactccacaggacgtaaaccgcccacttaatgctgctcagtgtttg
ttgcagcaagaacaaacagcattccttccagcaaatcaagtgcctgttttacaacagaac
acttcagttgctacaaaacaaccacagacttctgtagtacagaatcagcaacaggtatca
caacaggggccgatatatgatgaagtcgaattggacgcattggcagaaattgaacggata
gagagagaatcagccattgaaagggagcgcttctcaaaggaagttcaagataaagataag
cctttgaaaaaaagaaaacaagattcttacccacaggaggctgggggtgctacaggaggt
aatagaccagcttctcaggagacgggttctacgggaaatgggtcaaggccagcattaatg
gttagcattgatcttcatcaggcaggaagagtggactctcaggcttctataactcaggat
tcagactccataaaaaagcctgaagaaaccaaacagtgtaatgatgcacccatttctgtt
cttcaggaagatattgttggaagtcttaagtctataccagaaaaccatcccgagactcct
aaaaaaaagtctgattctgagctttcaaaaagcgaaatgaaacaaaacgaaagtaggtta
tcagaatctaaaccaaatgaaaatcagctgggggagtcaaaatcaaatgaaagtaagtta
gaaactaaaactgagaccccagcagaagaacttaagcagaacgagaacaaaacgacagag
tccaaacagagcgagagcgctgtagttgagcctaaacagaatgaaaatagaccgtgtgac
acaaaaccaaatgacaacaaacagaacaacaccaggtcagaaaacacaaaagcaagacct
gaaaccccaaagcagaaagctgaaagccggcctgaaaccccaaagcaaaagagtgaaggc
cggcctgaaaccccaaaacagaagggtgatggacgacctgagactccaaagcaaaagagt
gaaggccggcctgaaaccccaaagcagaaaggtgaaggccggcctgaaaccccaaagcat
aggcatgaaaataggagggattctgggaagccatcaacagagaagaaacccgatgtatct
aagcataaacaggatatcaaatctgactcacctcgcttaaaatcagaaagagctgaagcc
ttaaagcaaagacctgatgggcgatcggagtcactaagacgtgaccatgatagtaaacaa
aaatcagatgacaggggtgagtcagaacgacatcggggtgatcagtcaagggttcgaaga
ccagaaacattgagatcttctagtagaaatgaacatagcactaaatcagatggttcaaaa
actgaaaagctagaaagaaaacacaggcatgaatcaggggactcacgggacagaccttcc
ggggaacaaaaatcaagaccagacagtcctcgtgtaaaacaaggagatactaataaatcc
agacctggttttaagtcaccaaatagtaaagatgacaaaaggacagagggtaacagaagt
aaagtagacagtaataaagcgcacactgataataagtctgaatttccaagctatttgttg
ggggggaggtctggtgcattgaaaaatttcgtcattccaaaaatcaagagagataaagat
ggcaacataactcaggaaactaagaaaatggacatgaaaggagagcagaaagacaaagta
gaaaaaatgggattagttgaagatctaaacaaaggagctaagcctgtagttgttctgcaa
aaactatcgctggatgatgtccagaagctaattaaagatagagaggagaaatcaagaagt
tcccttaagtctatcaagaataagccatcaaagtcaaataaaggtagtatagatcaatca
gtgttaaaagaattgccccctgaactcctggcagaaattgaatctaccatgccactttgt
gaacgtgtgaaaatgaacaaacgcaagcgtagcacagttaatgaaaagccaaaatatgct
gaaatcagttcagatgaagataatgatagtgatgaagcttttgaatcctctaggaaacgg
cataaaaaagatgacgataaagcttgggaatacgaagagcgtgacagaagaagctctggg
gatcataggagaagtggccactcccatgacggaaggaggagttcgggtggtggtcgttac
cgaaaccgaagtccgtcagactctgatatggaagattactctcctcctcccagccttagt
gaggttgctagaaaaatgaagaaaaaagaaaaacaaaagaaaaggaaagcttatgagcca
aaactaacacctgaagaaatgatggattcttcaacttttaagagatttacagcctcaata
gagaatattttggataatttagaagatatggattttactgcatttggtgatgatgatgaa
attcctcaggaactgcttttaggaaaacatcagcttaatgaacttgggagtgaatctgct
aaaattaaagccatgggtataatggacaagctttcaactgacaaaactgtgaaagtccta
aatatattggaaaagaatattcaggatggatcaaagctttccactttgttaaatcataat
aatgatactgaagaagaagaaagattgtggagagacctaattatggaaagagttacaaag
tcagcagatgcctgtcttacaactatcaacattatgacctctcctaatatgccaaaagct
gtgtacattgaggatgtaattgaaagagttatacagtatactaaatttcatttacagaac
acactctatccccagtatgaccctgtttacagattagatccacatggaggagggttatta
agttcaaaggccaaacgggctaaatgttctactcataaacagagagtaatagtaatgctt
tataacaaagtctgtgacattgttagcagtttatcagaattgctagagatacagcttctt
acagacacaacaattcttcaggtttcatcaatgggaataacaccattttttgtggaaaat
gtcagtgaactacaattgtgtgccattaagttagtcactgcagtattttcaagatatgaa
aagcataggcagttaatattggaagaaatttttacttcacttgcaagattaccaactagc
aagagaagtttaaggaatttcaggttaaacagtagtgatgtggatggagaacctatgtat
attcagatggttacagcactagttttacaacttattcagtgtgtagttcacttaccatca
tcagagaaggatcctaattcagaagaagactcaaacaaaaaagttgatcaggatgttgtc
attactaactcttatgaaacagctatgagaacagcccaaaactttctttccatcttcctt
aaaaaatgtggtagtaaacaaggtgaagaagattacagaccactttttgaaaattttgtt
caagaccttctttcaacagtcaataagcccgagtggccagctgctgaactactccttagt
ttgttagggagactgttggtgcatcagttcagtaataagtcaacagaaatggctttaaga
gtggcatctcttgattaccttgggactgttgctgcacgactgagaaaagatgctgtcacc
agcaagatggatcaagggtctatagaacgaattttaaaacaggtttccggaggagaagat
gaaatccaacagctgcaaaaggcattgcttgattatttggatgagaacactgagacggac
ccttcgctagtgttttctcgtaaattctatatagcccagtggttccgtgacacaactctg
gaaacagaaaaagcaatgaaatcacaaaaagatgaagaatcatctgatgcaacacatcat
gcaaaagaaattgagacaactggtcaaatcatgcatcgagctgagaaccggaaaaagttt
cttcgaagcattatcaaaaccacaccttctcagttcagcacattaaagatgaactctgat
actgtggactatgatgatgcgtgcttgattgttcgatatttggcctctatgaggccgttt
gcccagagctttgatatttatttgacacagatactacgagttcttggtgaaaatgcaatt
gctgttcgaacaaaagccatgaagtgtttgtctgaggttgttgctgtagaccccagtatt
ctagcaaggcttgacatgcagcgcggagttcatggacgattaatggataactccactagt
gttcgtgaggcagcagtggagttactaggtcgatttgtcctttgtcgacctcagcttgct
gagcagtattatgatatgctgattgaaagaatattggatactggtatcagtgtcaggaaa
agagtaataaagattttaagagacatctgtatcgaacaaccaacatttccaaaaattaca
gaaatgtgtgtaaaaatgattcgtagagtcaatgatgaagagggcattaagaaattagta
aatgaaacattccaaaagctctggtttactccaacgccacataatgacaaagaagcaatg
acaaggaaaattttaaacatcactgatgtggttgcagcatgtagagatactggatatgac
tggtttgagcaactccttcaaaatttgttgaagtctgaagaggactcctcatataaacct
gtgaagaaagcttgtactcaacttgttgataacctagttgaacatattcttaaatatgag
gaatctctagctgactcagacaataaaggtgtaaattctggaagattggtagcttgtata
accactttgttcttattcagcaaaataagaccccaactcatggttaaacatgccatgact
atgcagccgtaccttaccactaaatgtagtacgcaaaatgacttcatggttatctgcaat
gttgcaaaaatccttgagttagttgtaccactgatggaacacccaagtgagactttcctt
gccactattgaagaagacctgatgaagctgatcatcaaatacggcatgactgtagtacag
cattgtgtgagctgtcttggggctgttgtaaataaagtgacccagaattttaaatttgtg
tgggcctgtttcaatagatattacggtgccatttcaaaattaaaaagtcagcaccaagaa
gacccaaataacacttcacttttaacaaataaaccagcgcttcttaggtccctcttcact
gttggagcactttgccggcattttgattttgatctggaagattttaaaggcaacagtaag
gttaacataaaggataaagtacttgaactattgatgtattttacaaaacactcagacgaa
gaagtacaaacaaaagccatcattggtctaggatttgcctttatacagcatccgagtcta
atgtttgagcaagaagtgaagaatctgtataatagtattttatctgataagaactcctca
gtgaatttaaaaatacaagtgttaaaaaacctccagacttacctacaagaagaagataca
cgaatgcagcaagcagacagagactggaagaaagttgcaaaacaggaagacttaaaagaa
atgggggacgtctcctcggggatgagtagctccatcatgcagctttacctcaagcaggtg
ctggaggccttttttcacacccagtcaagtgtgcgccactttgccctgaatgtgatcgct
ttgactctaaaccaaggcctcatccatccggtccagtgtgttccatacttaattgccatg
ggcacagatccagaacctgctatgcgtaacaaggctgatcagcagcttgtggaaatagat
aaaaaatatgctggattcatccatatgaaagctgtggctggtatgaagatgtcttaccag
gtacaacaggcgatcaacacgtgcctaaaagatcctgtaaggggtttccgacaagatgaa
tcctccagtgctttgtgctcacacctgtactccatgattcgtgggaaccgccaacacaga
cgcgcctttcttatttctttactcaacctctttgatgacacagcaaaaacagaagtgact
atgctcttgtacatagcagacaatctagcctgttttccataccagactcaggaagagccg
ctgtttataatgcaccacatagacattacgctctctgtttccggtagtaacctattgcag
tcattcaaggagtctatggtaaaagacaaaaggaaagagagaaaaacgtctcctgctaaa
gaaaatgagtccagtgagagtgaagaagaagtgtccagacctcggaagtctcgaaagcgg
gtagattcagaatcagactcagactcagaagatgatataaattcagtgatgaaatgtttg
ccagaaaattcagcccctttgattgaattcgcaaatgtctcccagggtattttattgctt
cttatgttaaagcagcacctaaagaatctctgtggattttcagatagtaaaattcaaaaa
tattctccatctgaatctgcaaaagtgtatgataaagccattaatcggaaaacaggggtt
cattttcatcccaaacaaacactggacttcctgcgaagtgacatggctaattccaaactg
acggaagatgtgaagaggagcatagtaaggcagtacctagattttaaacttctcatggaa
catctagaccctgatgaagaagaagaggagggagaggtgtcagctagcacaaatgctcgg
aacaaagcaattacctcgctgcttggaggaggcagccctaaaaataacacagcagcagac
acagaagatgaggagagtgatggggaggatagaggaggaggcacttcagggtcattgaga
aggtcaaaacgaaattcagactctacggagttggcagcacagatgaatgaaagtgttgac
gtcatggatgtcatcgctatttgctgtccaaagtacaaagaccgaccacagattgcaaga
gtagtgcagagaaccagcagtggcgtcagtgtccagtggatggcaggctcctacagcggc
tcctggacggaggccaagcgccgcgatggccgcaaactggtgccttgggtagacactatt
aaagagtcagacattatttacaaaaaaattgctctaacgagtgctaataagctgactaat
aaagttgttcagactttacgatccctgtatgccgccaaggatgggacttccagctaa
DBGET
integrated database retrieval system
