Mastomys coucha (southern multimammate mouse): 116083426
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Entry
116083426 CDS
T07224
Symbol
Ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116083426 (Ddx4)
Enzymes [BR:
mcoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116083426 (Ddx4)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
116083426 (Ddx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
116083426
NCBI-ProteinID:
XP_031216075
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MGDEDWEAEILKPHVSSYVPVFEKDKYSSGANGDSFNRTSASSSEMEDGPSGRDHFMRSG
FSSGRNLGNRDIGESSKRENTSTTGGFGRGKGFGNRGFLNNKFEEGDSSGFWKEYNNDCE
DNQTRSRGFSKRGGYQDGNDSEASGPFRRGGRASFRGCRGGLGLGRPNSEYEQDQGTQRG
GGLFGSRKPATSDSVQCLTGNGDTYQSRSGSGRGGYKGLNEEVVTGSGKNSWKSEAEGGE
SSDIQGPKVTYIPPPPPEDEDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANL
CQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDGI
TASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSVRQIVQG
CNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQR
QTLLFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEIL
RNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLV
ATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDTESDNHLAQP
LVKVLSDAQQEVPAWLEEIAFSTYVPPSFNSSTRGTVFASVDTRKNYQSKNMLNAAGISS
SQAPNPVDDESWD
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgaagattgggaggcagaaatcctcaaacctcatgtgtcttcctacgttcct
gtatttgagaaggataaatattcttctggagcgaatggagacagttttaacaggacttca
gcttcatcatcagaaatggaagatggaccttctggaagagatcatttcatgagaagtgga
ttttcttctggaagaaatttaggaaacagagatattggagagtctagtaaaagagagaat
acatctacaactggtggctttggaagaggaaagggttttgggaacagaggttttttaaat
aacaagtttgaagaaggtgatagctctggtttctggaaagagtataataatgactgtgaa
gataatcagactcggagcagagggttttccaagcgaggcggctatcaagatggaaatgat
tcagaagcttcaggtccattcagaagaggtggaagagctagtttccgaggttgccgtgga
ggacttggtttaggaagaccaaatagtgaatatgagcaagatcaggggacacagcgtggc
ggtggcctttttggttctaggaaaccagcaacaagtgattcagtgcaatgtcttacaggc
aatggtgacacttaccaaagcagaagtggaagtggccgaggtggttacaaaggtttaaat
gaagaagtagtaacaggctctggaaagaattcttggaagtcagaagctgaaggaggtgaa
agcagtgatattcaaggtcccaaagtgacatatataccccctcctccaccagaggatgag
gactccatctttgcacattatcagacaggcataaactttgataaatatgacaccatactt
gttgaagtatctggacatgatgcaccaccggcaattttgacttttgaagaagctaatctc
tgtcagacactaaataacaacattgctaaagctggctatactaagcttactcctgtgcag
aaatacagcattccgattgtattagcaggacgggatttgatggcttgtgctcaaacaggg
tctgggaagactgcagcttttctcttgcctattttggctcatatgatgcgggatggaata
actgccagtcgctttaaagaactgcaggaaccagagtgtattattgtagcaccaactcga
gaattgatcaaccaaatttatttggaagccagaaaattttcttttgggacttgtgtaaga
gctgttgtcatatatggaggaacccagtttgggcattcagttcgacagatagtacaagga
tgtaatatattgtgtgctactccagggaggctgatggatatcataggcaaagaaaagatt
ggcctcaaacaagtcaagtatttagttttggatgaagctgatcgaatgttggatatgggt
tttggaccagagatgaagaagttaatttcttgtccaggaatgccatcaaaggaacaacgc
caaacccttttattcagtgcaacgtttcctgaagaaatccagaggttggctggggagttt
ctaaagtcaaattatttgtttgttgctgttggacaagtgggaggagcttgcagagatgtt
cagcagacaattcttcaagttggccagtattcaaaaagagaaaaacttgttgagattcta
cgaaacataggtgatgaaagaactatggtctttgttgaaaccaagaaaaaagcagatttc
attgcaacttttctttgtcaagaaaaaatatcaactacaagtattcatggtgatcgggaa
cagagggagagagagcaagctcttggagattttcgctgtggaaagtgcccagttcttgtt
gctacttcagtggctgctagagggcttgatattgaaaacgttcaacatgttatcaatttt
gaccttccttctaccattgatgaatatgttcatcgaatcggacgtactgggcgttgtgga
aatactggcagggcgatttctttttttgatactgaatccgataatcatttagcacaacct
ctagttaaagtactgtcagatgctcaacaggaagttcctgcatggttagaagaaattgcc
tttagtacatatgtgcctcccagcttcaatagtagcacaagaggaactgtgtttgcatct
gttgacaccaggaagaattaccagagcaagaacatgttgaatgcagcggggatttcttct
tcacaagctcctaatccagttgatgatgagtcatgggattaa
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