Mastomys coucha (southern multimammate mouse): 116083698
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Entry
116083698 CDS
T07224
Symbol
Zfr
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcoc03041
]
116083698 (Zfr)
Spliceosome [BR:
mcoc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116083698 (Zfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
116083698
NCBI-ProteinID:
XP_031216315
LinkDB
All DBs
Position
Unknown
AA seq
1082 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHSGAAAAAAAAQYSSVLWSSMDQQPASG
VAYSHPTTVASYTVHQAPVAAHTVTAAYAPAAATVAVARPAPVAVAAAATAAAYGGYPTA
HTATDYGYTQRQQEAPPPPPPATTQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAAAVA
AAAQPQPSVAETYYQTAPKAGYSQGATQYTQAQQARQVTAIKPATPSPATTTFSIYPVSS
TVQPVAAAATVVPSYTQSATYSTTAVTYSGTSYSGYEAAVYSAASSYYQQQQQQQKQAAA
AAAAAAATAAWTGTTFTKKTPFQNKQLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEG
QKHKKKEAALKASQNTSSSNNSTRGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKL
HTKLGKPIPSTEPNVVSQATSSTAVSASKPTASPSSIGASNCTLNTSSIATSSVKGLSTT
GNSSLNSTSNTKVSAVPTNMAAKKTSTPKINFVGGNKLQSTGNKTEDLKGIDSVKNTPAA
SAVQIPEVKQDTVSEPVTPASLAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFN
DPNAKEMHLKGRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEE
ERWRMEIRRYEEDMYWRRMEEEQHHWDDRRRMPDGGYPHGPPGPLGLLGVRPGMPPQPQG
PAPLRRPDSSDDRYVMTKHATIYPTEEELQAVQKIVSITERALKLVSDSLSEHEKSKNKE
GDDKKEGGKDRALKGVLRVGVLAKGLLLRGDRNVNLVLLCSEKPSKSLLSRIAENLPKQL
AVISPEKYDIKCAVSEAAIILNSCVEPKMQVTITLTSPIIREENMREGDVTSGMVKDPPD
VLDRQKCLDALAALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVE
KAISSASSPQSPGDALRRVFECISSGIILKGSPGLLDPCEKDPFDTLATMTDQQREDITS
SAQFALRLLAFRQIHKVLGMDPLPQMNQRFNIHNNRKRRRDSDGVDGFEAEGKKDKKDYD
NF
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgcccggtagtttctttcacctatgtgcccagccggctgggggaagat
gccaaaatggcgaccggcaactactttggattcacccacagcggggcggcggcggcggcg
gctgcggcccagtatagttctgttctctggagcagcatggaccagcagccagcttcgggt
gtagcctattcccatccaactacagttgctagctacactgtccatcaggctccagtagct
gcccacacagttactgctgcttacgcaccagcagccgccacagttgcagttgccaggcct
gctccagttgctgttgcagctgctgcaacagctgctgcttatggaggctatcccactgca
cacacagcaaccgactatggttacacccagaggcaacaagaagcaccaccacccccaccc
ccagctactacacagaactaccaggactcatattcgtatgtaagatccacagcccctgct
gtagcttatgatagtaagcagtactaccaacagccaacagcaactgctgctgctgtagct
gctgctgcccagcctcagccttctgttgctgaaacctactatcagacagctcctaaagca
ggttatagtcaaggtgcaacacagtatactcaagcccagcaagctcgacaagtgacagcc
ataaaaccagccacaccaagtccagctactactactttctccatttatcctgtgtcctcc
actgtacaaccagtggcagctgcggctactgtggtaccatcctatactcagagtgctact
tacagtaccacagcagttacttattctggtacatcttattcaggttatgaagcagccgta
tattcagctgcgtcttcctactaccaacagcagcagcagcaacagaagcaagcagcagca
gcagctgctgctgcagcagcaacagctgcctggacagggaccacctttactaaaaaaaca
ccattccaaaataaacaactgaaaccaaaacagcctcccaaaccaccccagattcattat
tgtgatgtttgtaagatcagctgtgctggaccacagacttataaagagcacttagaagga
cagaaacataaaaaaaaggaagccgcattgaaagcctctcaaaataccagcagcagcaac
aactcaactcgtgggacacaaaatcagctacgttgcgagctctgtgatgtgtcttgtaca
ggagcagatgcatatgctgcccacattcgtggtgctaagcatcagaaagtggttaaatta
cacacaaaacttggtaaacctattccttcaacggaaccaaatgttgttagccaagctact
tcttcaacagctgtatctgcttcaaaaccaactgcctctccttcaagtattggagcaagc
aattgtactctgaacacgtcatcaattgcaacttcttcagtgaaaggtctttcaactaca
ggaaactcgtctcttaatagtacatccaacactaaagtatcagcggtacctaccaatatg
gctgccaagaaaacatctacacccaaaataaactttgttggtggaaataagctacagtca
acaggaaataaaactgaagacttaaaaggaattgactctgttaaaaatactcctgctgcc
tctgctgtgcagattccagaagtaaagcaagatacagtgtcagaaccagtcacacctgca
tcccttgctgctttgcagagtgatgtacaacctgtgggacatgattatgttgaagaggta
cgaaacgatgaaggaaaagtcattcgcttccattgtaaattatgtgaatgcagctttaat
gaccccaatgctaaagagatgcacctaaaaggacgaagacatagacttcagtataaaaaa
aaagtaaatccagatttgcaagttgaagtgaagcccagtattcgtgcaagaaaaattcaa
gaggagaaaatgagaaagcaaatgcagaaggaggaatattggcggagacgagaagaggag
gaacgatggaggatggaaataagacgttatgaagaagacatgtactggagaagaatggag
gaagaacagcatcattgggatgatcgccgacgaatgcctgatggaggctatcctcatggt
cctccgggcccattaggtcttttgggagtccgaccaggcatgcctccccagccacagggt
cctgcacccttacgtcgtcctgactcatctgatgatcgatatgtaatgacaaaacatgca
actatttatccaactgaagaagagttacaagcagttcagaaaattgtttctatcactgaa
cgtgctttaaagcttgtttcagacagtttgtctgaacatgagaagagcaagaacaaagag
ggagatgataagaaagagggaggtaaagacagagctctgaaaggggtgttgcgagtagga
gtattggcaaaaggattacttctccgaggagacagaaatgtcaaccttgttttactgtgc
tcagaaaaaccttcaaagtcattattaagccgtattgcagaaaacctacccaaacagctt
gctgttataagtcctgagaagtatgacataaaatgtgctgtatctgaagcagcgataatt
ttgaactcgtgtgtggagcccaaaatgcaagtcactatcaccctgacatctccaattatt
cgagaagagaacatgagggaaggagatgtaacctcgggtatggtgaaagacccaccggac
gtcttggacaggcaaaaatgccttgacgctctggctgctctacgccacgctaagtggttc
caggctagagctaatggcctacagtcctgtgtgattatcatacgtattctccgagacctt
tgtcaacgagttccaacgtggtctgattttcctagctgggctatggagttactggtagag
aaagcaattagcagtgcttctagtcctcaaagccctggagatgccctgagaagagtattt
gagtgcatttcttcagggattattctcaaaggcagccctggacttctggatccttgtgaa
aaggatccctttgatactttggcaacaatgactgaccaacagcgtgaagacattacttcc
agtgcacagtttgcattgagactcctcgcattccgtcagatacacaaagttctgggaatg
gatccattaccacaaatgaatcaacgctttaacatccacaacaacaggaaacgaagaagg
gatagtgatggagtggatggatttgaagcagaggggaaaaaagacaaaaaggattatgat
aacttttaa
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integrated database retrieval system
