Mastomys coucha (southern multimammate mouse): 116083752
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Entry
116083752 CDS
T07224
Symbol
Ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
KO
K10570
DNA excision repair protein ERCC-8
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03420
Nucleotide excision repair
mcoc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116083752 (Ercc8)
09124 Replication and repair
03420 Nucleotide excision repair
116083752 (Ercc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcoc04121
]
116083752 (Ercc8)
03400 DNA repair and recombination proteins [BR:
mcoc03400
]
116083752 (Ercc8)
Ubiquitin system [BR:
mcoc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
116083752 (Ercc8)
DNA repair and recombination proteins [BR:
mcoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
116083752 (Ercc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WDR55
WD_LRWD1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_1st
Beta-prop_Nup120_160
Beta-prop_WDR11_1st
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
116083752
NCBI-ProteinID:
XP_031216386
LinkDB
All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MLSFLYARQSGLEDPLRLRRAQSTRRVLGLELNKDRDVERIHGSGVNTLDIEPVEGRYML
SGGSDGVIVLYDLENASRQPYYTCKAVCSVGRSHPDVHKYSVETVQWYPHDTGLFTSSSF
DKTLKVWDTNTLQAADVFNFEETVYSHHMSPAATKHCLVAVGTRGPKVQLCDLKSGSCSH
ILQGHRQEILAVSWSPRHDYILATASADSRVKLWDVRRASGCLLTLDQHNGKKSQAVESA
NTAHNGKVNGLCFTSDGLHLLTIGTDNRMRLWNSSNGDNTLVNYGKVCNDSRKRLQFAVS
CGCSSEFVFVPHGSTIAMYAVHSGERLAMLKGHYKSVHCCVFQPNSQELYSGSRDCNILA
WVPASYEPVPDDDDKTPVKSQLNPAFVDTWSSSDEDG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgttgagctttctgtacgctcgacagtcgggtttggaggaccctcttcgcttgcgtaga
gcgcagtcgacacggagggtcctgggcctggagttaaacaaagacagggatgttgaaaga
atccatggcagtggagtcaacactctcgacatcgagcctgttgaaggacgatacatgttg
tcaggtggttccgatggtgtgattgtactctatgaccttgagaacgccagcagacagccc
tattacacatgtaaagcagtgtgttccgttggcagaagccatcccgatgttcacaagtac
agcgtggagacagttcagtggtaccctcatgacactggcttgttcacatccagctcattt
gataaaactctgaaagtatgggatacaaacacattgcaggctgcagatgtatttaatttt
gaggaaacagtttatagtcatcacatgtccccagcagccaccaagcactgtctggtagca
gttggaactagagggcccaaagtacaactttgtgacttaaagtctggatcctgttctcac
attctacagggtcacagacaggaaatattggctgtttcctggtcaccacgccatgactat
atcttggcaacagcaagtgctgacagtagagtaaaattatgggatgtgagaagagcatca
ggatgcttgcttactcttgaccagcataatgggaaaaagtcacaagctgttgaatcagca
aacactgctcacaatgggaaagttaacggcttatgttttacaagtgatgggcttcacctg
ctcaccattggcacagacaaccgaatgcggctctggaatagctccaacggggacaacaca
ctggtgaattacgggaaggtgtgtaatgacagcaggaaaaggctacagttcgctgtctcc
tgtggctgcagctcagagtttgtgtttgttccacacggcagcaccattgccatgtatgca
gttcactccggagagcggcttgccatgctcaagggacattacaaaagtgtccactgctgc
gtgtttcagcctaattcccaggaactttacagtggtagcagggactgcaatattcttgct
tgggtgccagcttcatatgaaccagttcctgatgatgacgataaaactccagtcaaatcc
cagttgaacccagcatttgtggatacctggagcagcagtgatgaggacgggtga
DBGET
integrated database retrieval system
