Mastomys coucha (southern multimammate mouse): 116084080
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Entry
116084080 CDS
T07224
Symbol
Zc3h13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116084080 (Zc3h13)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
116084080 (Zc3h13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
zf-CCCH_PAN3
Motif
Other DBs
NCBI-GeneID:
116084080
NCBI-ProteinID:
XP_031216690
LinkDB
All DBs
Position
Unknown
AA seq
1733 aa
AA seq
DB search
MSKIRRKVTVENTKTISESTSRRPSVFERLGPSTGSTTETQCRNWLKTGSCLYGNTCRFI
HGPSPRGKGYSSNYRRSPERPTGDLRERMKNKRQDVDSESQKRNTEEASSPVRKESSRGR
HRDKEDIKIVKERTPESEEENVEWETNRDDSDNGDINYDYVHELSLEMKRQKIQRELMKL
EQENMDKREEIIIQKEVSPEVVRSKLSPSPSLRKSSKSPKRKSSPKASSTGKKERKAAVV
ASPLLDQQRNSKGNQSKKKGPRTPSPPPPILEDIILGKKYKEKYKVKDRIEEKPRDGKDR
GRDFERQREKRDKPRSSSPGQHHSPLSSRHHSSSSQSGSSIQRHSPSPRRKRTPSPSYQR
TLTPSLRRSASPYPTHCLSSPQRKQSPPRHRSPMREKGRHDHERTSQSHDRRHERREETR
GKRDREKDTREEREPEHDHRDDREPRDSRDRRDTRDRRELRDSRDMRDSREMRDYSRDTK
ESRDPRDSRSARDVHDYRDREARDVHARDVRDARDARDARDIRDVRDVRDVRDVRDVRDV
RDVRDAREVRDVRDVRDARDVRDARDVRDVRDVRDIRDARDSHRKEDVYQEEARSYGRNH
LREESSRVELRNDSRNESRSEIRNDRMGRSRGRGPELPEKGSRGTRGSQMDSHSSGSNYH
DSWETRSSYPERDRYPERDTRDQARDSSFERRHGERDRRDNRERDQRPSSPIRHQGRSEE
LERDERREERRIDRVDERRDERVRDRDRDREREREREREREREREREKERERELERERAR
EREREREKERERERERERDRDHDREREREREREREKEREREERERERERERERERERERE
RERERERERERERAREREKERERQREWEDKDKGRDDRREKREDVHIRDDRILRDSHEERK
SKKRYRNEGSPSPRQSPKRRREHSPDSDTYHSGDDKNEKHRLLSQVVRPQESRSLSPSHL
TEDRQGRWKEEDRKSERKESSRRYEEQELKEKLSCSDRQREQAESVDSSRVRVQDLLSHR
QAEDRNRDGSDRVHDEKKKAKAPKKPVKKKKEEDVGIERDNLETHEDSQVFSPKKGQKKK
NIEKKRKRSKGDSDVSDEEAAPQNKKKRGPRTPPLAIKEELIDISTDKDGILEDPLKKED
TAFSDWSDEDVPDRTEGMEAEHTAATATPGSTPSPLSSLLPPPPPVAAASSAATALAPSA
ISATTSATVSSSAATSNTNGSEDSHRKCHRARGEKVEVSHVTLEDTPHRKLVDQKRSSSL
GSNRSHRSHTSGRLRSPSNDSAHRSGDDQGSRKRVLHSGSRDREKTKSLEITGERKSRID
QLKRGEPSRSTSSDRQDSRSHSSRRSSPESDRQGHSRSGSFDSRDRLQERDRYEHDRERE
RDRRDPRQREWDREAEKEWPRTRDRDRLRERERDRDKRRDLDRERERLITDPMERDRERD
RTFETSQLESVKRSEVKLESEHERDLEGSSRDSMALDKERMDRDLGSVQGFEDVSKAERT
ESLEAGDDESKLDDAHSLGSGAGEGYEPISDDELDEILAGDAEKREDQQEEEKMPDPLDV
IDVDWSGLMPKHPKEPREPGAALLKFTPGAVLLRVGISKKLAGSELFTKVKETCQQLLEK
PKDADSLFEHELGALNMAALLRKEERASLLSDLGPCCKALCFRRDSAIRKQLVKNEKGTV
KQAYTNTPMVDNELLRLSLRLFKKKTACHAPGQEKTEDGKLAACSVQQELCVS
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaattaggagaaaggtcacagtggaaaacaccaagaccatatctgagagtaca
tcccgaagacctagtgtatttgagaggcttggacccagcactggaagcacaacagagaca
cagtgccgtaactggctgaagactggcagctgcctctatggaaacacatgtaggttcata
catggcccttcacctcgtggcaaaggttacagcagcaactacagaaggtcaccagaaaga
cctacaggtgatctcagagagagaatgaagaataagcgtcaggatgtggattctgaatcc
cagaaacggaacacagaggaggcatcctcacctgttaggaaagaatcatcaagagggaga
catagagacaaggaagacataaaaattgttaaggagagaactccagaaagcgaagaagaa
aatgtagagtgggaaactaacagagatgactctgacaatggagatattaattatgattat
gttcatgaattatcattggaaatgaagcgtcagaaaatacagagagaattaatgaaattg
gaacaagaaaacatggataagagagaagaaattatcattcaaaaggaggtttccccagaa
gtggttagatcaaaattgtctccatcaccttctctgagaaagtccagtaaatcgccaaag
cgaaagtccagccccaaggcatcttcaactggcaagaaagagcggaaggctgctgtggtg
gcttctccactgttggaccagcagagaaattcgaaaggcaaccaaagtaaaaagaaaggg
ccacgcactcctagtccacctcctcctatattagaagatatcattctggggaaaaaatat
aaagaaaagtataaagtgaaagacaggatagaagaaaaaccaagagatggaaaagacaga
ggacgggattttgaaaggcaaagagaaaaacgagacaagccaaggtcttcctccccggga
cagcaccattctcctctgtcttctagacatcactcgtcatcctcacagtcagggtcatcc
attcagagacactctccttctcctcgccggaaaagaactccttccccgtcctaccagaga
actttaacaccatctttacgacgttctgcctctccttatccaacccattgtctgtcttct
cctcagagaaagcaaagtcctccaagacatcgctctccaatgcgagagaaagggaggcat
gatcatgaacggacttcacagtcacatgatcggcgtcacgaaaggagggaagaaactcga
ggcaaaagggatagagaaaaggacacaagagaagagcgagagcctgaacatgaccacagg
gatgacagagaaccacgagacagccgagaccggagagacactagagaccgcagggaactt
agagactccagagacatgcgggactccagagagatgagggattatagcagagataccaag
gagagccgcgatcccagagattcccggtcagctcgggatgtccatgactacagggaccgt
gaagctcgggatgttcatgctcgagatgttcgggatgctagggatgctcgagacgctcgg
gatattcgggatgtccgtgatgttcgggacgtgcgggatgtccgagatgtccgcgatgtc
cgcgatgtccgtgatgctcgggaagttcgggatgttcgggatgtccgggatgctcgagat
gtccgggatgctcgcgatgtccgggatgttcgggatgtccgggatatccgggatgctcgg
gatagtcatcgaaaggaggatgtataccaggaagaagcccgcagttatggcagaaaccac
ctgagagaagagagttctagagttgaactaaggaatgactctagaaatgagtctcgaagt
gaaattagaaatgaccgaatgggcagaagtagggggagaggtccagaactgcctgaaaag
ggaagtcgaggcacaagaggatcccaaatggatagccatagtagtggcagcaactaccat
gacagctgggaaactcgaagtagctatcctgaaagagacagataccctgagagagacact
cgagatcaagcaagggattcttcctttgagagaaggcatggagaaagagaccgtcgggat
aacagagaacgagatcaaagaccaagctcacctattcgccatcagggaaggagtgaggag
cttgagcgagatgaaagaagagaggaaagaagaatagacagagtggatgagagacgagac
gaaagggttagagacagagatagggatcgagagcgagaaagggagagggagagagagcgg
gagcgagagcgggagcgagaaaaggaaagagaaagagaactagaaagagagagagctaga
gagcgggaaagagagagagagaaagagagggagagggagcgagaacgagagagagatcgt
gaccatgatcgagagcgagaaagagagagggagcgagagagggaaaaagaacgggagcga
gaagagagagagagggagagagaaagggaacgggaacgggaaagagaaagggaacgggag
agggagagagagcgagaacgggagcgggagcgagagagggccagagaaagagaaaaagaa
cgagaacggcaaagagagtgggaagataaagacaagggacgcgatgaccggagggagaag
cgcgaggatgttcatattcgagatgacaggatcctcagagacagccacgaggagaggaag
tccaagaagcgctatagaaatgaagggagtcccagccctcggcagtcccccaagcgccgg
cgggagcattctcctgacagtgacacctaccacagtggggatgacaaaaatgaaaagcat
agactcttgagccaggttgtacggccacaggaatctcgttctctcagcccatcccacctc
acagaagacaggcaaggtagatggaaagaggaggatcgtaaatcagaaagaaaggagagt
tcaaggcgctatgaagaacaagaactcaaagagaagctttcttgtagcgacaggcaaagg
gagcaggcagaaagcgtggacagctcaagagtgcgcgtgcaagacctccttagccatcgg
caggccgaagaccgcaaccgcgatgggtctgatcgagtccacgatgaaaagaaaaaagca
aaagctccgaagaaacctgtaaagaaaaagaaggaggaggatgtcggaatagagagggac
aaccttgagacacatgaggatagtcaggtgttttcaccaaaaaaaggacagaagaagaaa
aacattgaaaaaaagcgtaaaagatccaagggtgattctgatgtttctgatgaagaggca
gccccgcagaataagaagaagagaggtccacgcacaccccctctggccatcaaggaggag
ctgattgacatttccactgacaaggatggcatcctcgaggatccactgaagaaagaggat
acagcctttagtgactggtccgatgaggatgtgcctgaccgcactgagggcatggaagcc
gagcacaccgcagccactgccactcctggaagcaccccttccccgctgtcttctcttctc
ccccctccaccccctgtggctgctgccagttctgcagccactgctcttgccccctcagct
atttctgctaccacctctgccactgtttcaagctctgctgctacctccaataccaatggc
agtgaagactcacatagaaaatgccacagggcacgaggggagaaggtggaagtgtctcat
gtgaccctagaagacacaccacatcgcaagctggtggatcaaaagagaagcagcagcctt
ggaagcaatcgaagtcaccgcagccacacctctggtcgcctacgctccccatctaatgat
tctgctcatcgaagtggggatgaccagggtagtcggaagagagtgctccatagtggctcc
agggacagagagaaaacaaaaagcctagaaatcacaggagagagaaagtctaggattgat
cagttaaagcgtggagaacccagtcgaagtacttcttcagatcgccaggattccagaagc
cacagctcaaggagaagctctcctgagtcagatcggcagggtcactcaagatctgggtca
tttgacagtagagaccgacttcaagaacgagataggtatgagcatgacagagagcgggag
agggaccggagagatcccaggcagagggaatgggaccgggaggctgagaaggagtggcct
cggaccagagaccgagatagacttcgggaacgagagagagaccgagacaaaaggagagac
ttggacagagaaagagagcgactgatcactgaccccatggaaagggacagagaacgagat
agaacttttgagacgtctcagttggaatctgtgaaacgaagtgaagtcaaattggagagt
gaacacgagagagacctggaaggcagctcccgggactctatggccttggacaaagaaagg
atggacagagacctggggtctgtgcaagggtttgaagatgtgagtaaagctgagagaaca
gagagtctggaagcaggagatgacgaatctaagttagatgatgcacattcattaggatct
ggtgctggggaaggatatgagcccatcagtgatgatgagctggatgaaattctggcaggg
gatgcagaaaagagagaggaccagcaggaagaggagaagatgccagacccattagatgtg
attgatgtggactggtctggactaatgccaaagcatccgaaagaaccaagagagcctggg
gctgcactgttaaagttcacgcctggagccgttcttctgcgagttgggatttctaaaaag
ttggccggttctgagctctttaccaaagttaaagaaacatgtcaacaacttctagaaaaa
cccaaagatgcagacagccttttcgaacatgaactaggggctctcaatatggctgcttta
cttcgaaaagaagagcgagcaagtctccttagtgacctgggaccgtgttgtaaagcacta
tgtttcagacgggattctgcaatccggaagcagcttgtgaagaacgaaaagggaactgtg
aagcaggcgtacacaaacactccgatggtagacaatgagctgcttcggctaagtcttcgg
ttattcaagaagaagaccgcttgccatgcccctggacaggaaaagactgaagatgggaag
ttagcagcgtgcagtgtccagcaggagctgtgtgtgtcctag
DBGET
integrated database retrieval system
