Mastomys coucha (southern multimammate mouse): 116084121
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Entry
116084121 CDS
T07224
Symbol
Nisch
Name
(RefSeq) nischarin isoform X1
KO
K24095
nischarin
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mcoc04990
]
116084121 (Nisch)
Domain-containing proteins not elsewhere classified [BR:
mcoc04990
]
Phox homology (PX) domain-containing proteins
Other PX domain-containing proteins
116084121 (Nisch)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
PX
LRR_8
LRR_9
LRR_14
LRR_NXF1-5
PH_PLEKHM2
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
116084121
NCBI-ProteinID:
XP_031216824
LinkDB
All DBs
Position
Unknown
AA seq
1655 aa
AA seq
DB search
MAAATLSFGPEREAEPAKEARVVGSELVDTYTVYVIQITDGNHEWTIKHRYSDFHDLHEK
LVAERKVDKTLLPPKKIIGKNSRSLVEKREKDLEVYLQTLLTTFPDVAPRVLAHFLHFHL
YEINGITAALAEELFEKGEQLLGAGEVFAIRPLQLYAVTEQLQQGKPTCASGDAKTDLGH
ILDFTCRLKYLKVSGTEGPFGTSNIQEQLLPFDLSIFKSLHQVEISHCDAKHIRGLVTSK
PTLATMSVRFSATSMKEVLVPEASEFDEWEPEGTAPEGPVTAVIPTWQALTTLDLSHNSI
SEIDESVKLIPKIEYLDLSHNGVRVVDNLQHLYNLVHLDLSYNKLSSLEGVHAKLGNVKT
LNLAGNFLESLSGLHKLYSLVNLDLRDNRIEQLDEVKSIGNLPCLERVALLNNPLSIIPD
YRTKVLSQFGERASEICLDDVATTEKELDTVEVLKAIQKAKDVKSKLSNTEKKVGEDFRL
PAAPCIRPSSSPPTAAPTSASLPQPILSNQGIMFVQEEALASSLSSTDSLPPEDHRPIAR
ACSDSLESIPTGQVASDDFRDVPGAVGGVSPDHAEPEVQVVPGSGQIIFLPFTCIGYTAT
NQDFIQRLSTLIRQAIERQLPAWIEAANQREEAHGEQGEEEEEEEEEEDAAENRYFEMGP
PDAEEEEGSGQGEEDEEDEDEEAEEERLALEWALGADEDFLLEHIRILKVLWCFLIHVQG
SIRQFAACLVLTDFGIAVFEIPHQESRGSSQHILSSLRFVFCFPHGDLTEFGFLMPELCL
VLKVRHSENTLFIISDAANLHEFHADLRSCFAPQHMAMLCSPILYGSHTTLQEFLRQLLT
FYKVAGGSQERSQGCFPVYLVYSDKRMVQTAAGDYSGNIEWASCTLCSAVRRSCCAPSEA
VKSAAIPYWLLLTSQHLNVIKADFNPMPNRGTHNCRNRNSFKLSRVPLSTVLLDPTRSCT
QPRGAFADGHVLELLVGYRFVTAIFVLPHEKFHFLRVYNQLRASLQDLKTVVISKNPSAR
PRHQSQPAKSRASAEQRPQETPAEAPAPVPAPAAVPAPAAVPAPAAVPAPAAVPPTASAP
APAEASASGPAPEQAPVEDSGLTSAGSPAPAEAPLPTEAPAPAEAPAPTEAPAPTEAAAG
ALAPTEAPAGAPAPTEAPAGAPAPTEAPAGAPTPAEAPAPEGAPAPAGGPTPAGPPAPAG
GPAPAGGPTPTGPPAPAGSSTPAGGPTPAGVPAGGPALAEAKAQAEAKAQAEVPAQYPSE
RLIQSTSEENQIPSHLPVCPSLQHIARLRGRAIIDLFHNSIAEVENEELRHLLWSSVVFY
QTPGLEVTACVLLSNKAVYFILHDGLRRYFSEPLQDFWHQKNTDYNNSPFHISQCFVFKL
SDLQSVNVGLFDQYFRLTGSSPTQVVTCLTRDSYLTHCFLQHLMLVLSSLERTPSPEPTD
KDFYSEFGDKNTGKMENYELIHSSRVKFTYPSEEEVGDLTYIVAEKMADPAKNPALSILL
YIQAFQVVTPHLGRGRGPLRPKTLLLTSAEIFLLDEDYIHYPLPEFAKEPPQRDRYRLDD
GRRVRDLDRVLMGYYPYPQALTLVFDDTQGHDLMGSVTLDHFGEMPGGPGRAGQGREVQW
QVFVPSAESREKLISLLARQWEALCGRELPVELTG
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcgacactcagcttcggcccagagcgggaggccgagcctgccaaggaggcg
cgcgtcgtgggttctgagctcgtggacacgtacacggtttatgtcatacagattactgat
ggcaaccacgagtggacgatcaaacaccgttatagtgattttcatgacctacatgagaag
cttgttgcagagagaaaagttgacaaaactctacttccacccaaaaagataattggaaag
aactccagaagcctggtagaaaagagggagaaagacctggaggtgtacctccagactctc
ctgacgaccttccctgatgtggctcccagagttctggcccacttcctgcattttcacctc
tatgagataaatggtatcactgcagcactggctgaagaactctttgaaaaaggagaacag
cttctaggagccggtgaggtcttcgccatcaggcccctgcagctctatgctgtcaccgaa
cagctgcagcagggaaagcctacttgtgccagcggtgatgccaagactgaccttggacac
atcctagacttcacctgtcgacttaagtaccttaaggtttcaggtacagaaggacctttt
gggaccagcaatattcaggaacagctcctgccctttgatctttcaatattcaagtctctt
caccaggtggagataagtcattgtgatgccaagcatatccgagggctggtcacctccaag
ccaactttagccacaatgagtgttagattctcagcaacctcaatgaaggaagttcttgtt
cctgaagcctcagaatttgatgagtgggagcctgaaggcacagcccccgaaggccctgtg
actgctgtcatcccaacatggcaagcactgactactctagacctgagccacaacagcatc
tctgagatcgacgaatctgtgaaactgatcccaaagattgagtacctggacctgagtcac
aatggagtccgagttgtggacaacttgcagcacctatacaacctcgtgcaccttgacctg
tcctacaacaagctctcctctctggaaggcgtgcacgctaaactgggcaacgtcaaaacc
ctaaacctggcaggcaacttcttagagagtctgagcggtctgcacaaactctactccctg
gttaatctggacctcagagacaaccggattgagcagttggatgaggtgaagagcataggc
aacctgccatgtctggagcgtgtggccttgctgaacaaccctttgagcatcatccctgac
taccggaccaaggtgctctcccagtttggagaacgagcctctgagatctgtctagatgat
gtcgcaaccacagagaaagagctggacactgtggaagtgctgaaggcaattcagaaagcc
aaagatgtgaagtccaaactgagcaacacagaaaagaaggttggtgaggacttcaggctc
ccagctgctccctgcatcagacccagcagctcccctcctactgcagctcccacctcagcc
tccctgcctcagccgatcctctccaaccaaggtatcatgttcgtacaggaagaggccctg
gccagcagcctctcatccactgatagtctgccacctgaggaccaccggcccattgcccga
gcctgctctgactccttggaatctatccccacaggacaggtggcctctgacgatttcagg
gacgtgccaggagctgttggtggcgtgagcccagatcatgcagagccagaggttcaggtg
gtgcctgggtctggccagatcatcttcctgcccttcacttgcattggctacacagccacc
aaccaggactttatccagcgcctcagcacactgatccgccaggccattgaacggcaactc
cctgcctggattgaggctgccaaccagcgagaggaagcccatggtgaacagggtgaggag
gaggaggaagaggaggaagaggaggatgctgctgagaaccgctactttgaaatgggaccc
ccagacgcagaggaagaggaggggagtggccagggagaagaggatgaggaagatgaagac
gaggaggctgaggaggaacgcctggctctggagtgggccttgggcgctgatgaggacttc
ctgctggagcacatccgcatcctcaaggtgctgtggtgcttcctgatccacgtgcaaggc
agcatccgccagttcgctgcctgcctcgtgctcactgacttcggcatcgctgtctttgag
attccacaccaagagtcacgaggcagcagccagcacatcctctcatccctgcgttttgtc
ttctgcttcccacacggtgacctcacggagtttggctttctcatgccggagctgtgtctg
gtgctcaaggtgcggcacagtgagaacacgctcttcatcatctcggatgctgccaactta
cacgagttccatgctgatctgcgctcctgctttgcaccacagcacatggccatgctgtgc
agccccatcctctacggcagccacactaccctgcaagagtttctgcgccagctgctcacc
ttctacaaggtggccggcggctctcaggagcgcagccagggctgcttccctgtctacctg
gtctacagtgacaagcgcatggtccagacagctgctggggactactcaggcaatatcgaa
tgggccagctgcacgctgtgctcggcagtgcggcgctcctgctgcgctccctctgaggcg
gttaagtctgctgccatcccctactggctgctgctcacgtcccagcatctcaatgtcatc
aaggccgacttcaaccccatgcccaatcgtggcacccacaactgccgcaaccgcaacagc
ttcaagcttagccgtgtcccactctctactgtgctgctagaccccactcgcagctgcacc
cagccacggggtgcctttgctgatggccatgtgcttgagctgcttgttggctaccgcttt
gttaccgccatctttgtgctgccccacgagaagttccacttcctgcgagtctacaatcag
ctacgagcctcactgcaggacctgaagactgtggtcatctccaagaacccttcagctagg
ccaagacaccaaagccagcctgccaagagcagggccagtgctgagcagcggccacaggag
acaccagcagaagctcccgctccagttccggctcccgctgcagtcccggctcccgctgca
gtcccggctcccgctgcagtcccggctccagctgcagtcccaccaacagcttcagcccca
gccccagcagaggcctcagcttcaggtccggctcccgaacaggccccagtagaggactca
ggtctaacttcagcagggtctccagccccagcagaggctccacttccaacagaagctcca
gctccagcagaggctccagctccaaccgaggctccggctccaacagaggctgcagcaggg
gctctggctccaacagaggctccagcaggggctccagctccaaccgaggctccggcaggg
gctccggctccaacagaggctccagcaggggctccaactccagcagaggctccagcccca
gaaggggctccagctccagcagggggtcccactccagcagggcctccagctccagcaggg
ggtcccgctccagcagggggtcccactccaacagggcctccagctccagcagggagttcc
actccagcagggggtcccactccagcaggggttccagcagggggtcccgctctagcagag
gccaaggcacaagcagaggccaaggcacaagcagaggtccctgcccagtacccaagtgag
cgcctaatccagtccacatctgaggagaatcagatcccttctcacttgccagtctgccca
tcactccagcacattgcccgtcttcgggggagagccatcatcgaccttttccacaacagc
attgccgaggttgaaaacgaggagctgaggcacctcctgtggtcgtcagtggtgttctac
cagaccccggggctagaagtgaccgcctgtgtgctgctctccaacaaggctgtgtacttc
atactgcatgacggcctccgccgctacttctctgaaccacttcaggatttctggcaccag
aaaaacactgactataacaacagtcctttccacatctctcagtgctttgtgttcaaactc
agtgacctgcagtcagtcaacgtcggccttttcgaccagtacttccggctgacgggctcc
tccccgacacaggtggtcacatgcttgacccgcgacagctacctgacacactgcttcctc
cagcatctgatgcttgtgttgtcttccctggaacgcacaccctcacctgagcctactgac
aaggacttctactcggaatttggggacaaaaatacagggaaaatggagaactatgagctg
atccattccagccgcgtcaagttcacctaccccagtgaggaagaggtcggggacctgacc
tatattgtcgcagagaagatggctgatcctgcaaagaatccagctctcagcatcttactg
tacatacaggccttccaggtggtcacaccacatcttggacggggcaggggcccactgcgt
cctaagacactcctcctgaccagtgctgagatctttctcctggatgaggactacatccac
tatccattgcctgaatttgccaaagagccaccacagagggacagataccggctagatgat
ggccgccgtgtccgagatttggaccgggtgctcatgggctattatccctacccacaggcc
ctcactcttgtttttgatgacacgcagggccatgacctcatggggagtgtcaccctggac
cacttcggggagatgccaggtggtcctggcagggctggccagggccgggaggtgcagtgg
caggtgtttgtccccagtgccgagagccgagaaaagctcatctcactgctcgcacgacag
tgggaagctctttgtggcagggagctgcctgtggagctcactggctag
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integrated database retrieval system
