Mastomys coucha (southern multimammate mouse): 116084276
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Entry
116084276 CDS
T07224
Symbol
Ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
116084276 (Ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116084276 (Ercc6)
03400 DNA repair and recombination proteins [BR:
mcoc03400
]
116084276 (Ercc6)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
116084276 (Ercc6)
DNA repair and recombination proteins [BR:
mcoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
116084276 (Ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
ResIII
DEAD
HDA2-3
Ig_Rha78A_N
Motif
Other DBs
NCBI-GeneID:
116084276
NCBI-ProteinID:
XP_031216993
LinkDB
All DBs
Position
Unknown
AA seq
1479 aa
AA seq
DB search
MSHEEIPNSTHPQEQDHLPNQHVSADTDMPVEQESGGVSEAGECLSSTSCEYGPSTSAEA
SVLAVTRRGPTLLHIDRHQIPAVEPSAQALELQGLGVDVYDQAVLEQGVLQQVDSAMHEA
SRAAQLADAEKDYQSVLDDLMSCTTSLRQINKIIEQLSPQAASNRDINRKLDSVKRQKYN
KEQQLKKITAKQKRLQAILGGAGVQVELDHASLEEEDAEPGPSCLGSMLMPAQETAWEEL
IRTGQMTPFGTPAPQKQEKKPRKIMLNEASGFEKYLADQAQLSFERKKQVANKRTTRKAV
VISESSRAPNETKPDQGSQVLSQTDKRLKKHIRKLQKRALQFQGKVGLPRGKKPLEPEVR
PEAEGDTEGEESGSSPTGGDEEEEQEEEEEVASPSSDDISYELKPLRKGQKYQKKVPVQE
IDDDFFPSSEEEDEALEGRGGRKVARHQDDGDEDCYKQRLRKWNRQRLQDKEKRLKLEDD
SEESDAEFDEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAF
LAGLSYSKIRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYAH
KKERLIRDTVHCHGVLITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQF
RTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVK
TAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKAV
YRILNGENQIFSGLVALRKICNHPDLFSGGPKNVIGLPEDELEEEQFGYWRRSGKMIVVE
SLLKIWHRQGQRVLLFSQSRQMLHILEVFLRAHKYSYLKMDGTTTIASRQPLITKYNEDT
SIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTA
GTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLTSPDASQGTETSAIFAGT
GSNIQTPKCHLKKRTPPVLETDPKCKKPPVSDTPANGATLMGEKPKAVGATGSVTSGESG
PLKGDHHTNGNRASNVAFGEEIDAGSTLEHLSVMSRDGKCSDSPTVDHTSRPSVEASTIE
KQGSSYEGECCQAQAEPVPTSEQMEGQFSKHKSKRKHDASEDEATEKHPQPKQKAKNSKH
CRDAKFEGTRVPHLVKKRRYRQQTTEQDSGAKDRSSDDYVLEKLFKKSVGVHSVVKHDAI
IDGSSPDYVLVEAEANRVAQDALKALRLSRQQCLGATSGVPTWTGHRGISGAPTGVKNRF
GQKRNSNLPVQRPSSLTERTQNNMKKEGKAHTPEHFSGKEDGASLSGAPSSSSLLARMRA
RNHMILPERLESDSEHLAEAAAVPPCSTEHDDLLVDMRNFIAFQAQVDGQASTQEILQEF
ESKLSVAQSCVFRELLRNLCNFHRTPGGEGIWKLKPEYC
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatgaggaaatccccaactccactcatcctcaagagcaagaccatttaccaaat
cagcatgtcagtgccgacacagacatgccagttgagcaggagagtggtggggtctcagaa
gctggggagtgcctctcttctacttcctgtgagtatgggccatccacatctgctgaagct
tctgtgttggcagtcacaaggcggggaccaaccctgctacacattgataggcatcagatc
cctgcagtggagcccagtgctcaggccctggaactgcagggcctgggtgtggacgtttat
gaccaggccgtcctggagcaaggcgtgcttcagcaggtggacagtgcgatgcatgaggcc
agccgtgcggcccagcttgctgatgcggagaaggactatcagtcagtcctggatgacctc
atgtcatgtacaacatccctgaggcaaatcaataaaattatagagcaacttagccctcaa
gctgccagcaacagagacatcaacaggaaactagattccgtgaaacgacagaagtataac
aaggaacaacagctaaagaagataactgcaaaacagaaacgtctccaggccattctcgga
ggggctggggtccaagtggaactggatcatgccagcctagaggaggaagatgcagagcca
gggccatcatgtcttggcagtatgctcatgcctgcccaggagactgcctgggaagagctt
attcgcactggccagatgacaccgtttggtactccagcccctcagaaacaggagaaaaag
cctagaaaaataatgctcaatgaagcttcaggctttgaaaaatatttagcagaccaagca
caactttcgtttgaaaggaagaaacaagttgctaataaaaggacaactagaaaagctgtg
gttatatctgagtcaagccgagcaccaaatgaaaccaagccagaccagggaagccaagtg
ctctctcagacagataagcgcctgaagaagcacatcaggaagctccagaagagggcgctg
cagttccaggggaaagtgggattgccaagggggaagaaacctctggagcctgaggtgagg
ccagaggccgagggagacactgaaggtgaggagtctgggtcctctcccactggtggggac
gaggaggaagagcaagaggaggaggaagaggtagccagcccgtcttctgatgacattagc
tatgaactgaagcctcttcggaaggggcaaaaataccagaagaaagttccagtgcaggag
atcgacgatgacttttttccaagttcagaggaggaagatgaagctctggaaggaagagga
ggccgcaaggtagccaggcaccaagacgatggagatgaggattgttataagcagcggtta
aggaagtggaataggcagaggctgcaggacaaagagaaacgcctgaagcttgaagatgat
tctgaggagagcgatgctgaatttgatgaaggtttcaaagtgccgggttttctgttcaaa
aagctctttaagtatcagcagacaggtgttaggtggctgtgggaattgcactgccagcag
gcaggaggaattctgggagacgaaatgggattgggcaagaccatccagataattgccttc
ttggcaggtctgagctacagcaagatcaggactcgcggttcaaattacaggtttgaggga
ctaggccccacaataattgtctgcccaacgacagtgatgcatcagtgggtgaaggaattc
cacacgtggtggcctccattcagagtggcgattcttcatgaaacaggttcctatgcccac
aaaaaggagaggctgattcgagatactgttcattgtcatggagttttgataacttcgtat
tcatacatccgactgatgcaagacgacattagcagacatgactggcactatgtcatctta
gatgaaggacacaaaattcgaaatccaaatgctgcagtcacccttgcttgcaagcagttc
cggacacctcatcggattatcttgtccggctcaccaatgcagaataacctccgagaactg
tggtcactctttgacttcatcttcccaggaaagctaggcacattgcctgtgtttatggag
cagttctcagtccccatcaccatgggaggttattccaatgcttccccagtacaggttaaa
actgcctataaatgtgcatgtgtcttaagagacacaataaacccatacctactgcggaga
atgaaatcagatgtcaagatgagcctttcgttgccagataaaaatgagcaggtcttattt
tgccgtctaactgatgagcagcataaagtctaccagaatttcattgattccaaagcagtt
tacaggattctcaatggagagaatcagattttctctggacttgtagctctgaggaagatc
tgcaaccaccctgacctgttttctggaggtcccaagaatgtcattggtcttccagaggac
gaattggaagaagagcagtttggatactggagacgctctgggaaaatgattgttgttgag
tctttgctgaaaatatggcacaggcagggtcagcgggtgttgctgttttcccagtccagg
cagatgctgcacatactagaagtgttcctgagagcccacaagtattcctatctcaagatg
gatgggaccaccaccatagcatcaagacagccactgattacaaaatacaatgaggacacg
tccatctttgtctttcttctgaccacacgggtgggtggcttaggagtgaacctgaccggg
gccaacagagtcatcatctacgaccctgactggaacccaagcaccgacacacaggcccga
gagcgagcatggaggataggtcagaagaagcaagtgactgtctataggcttctgacggcc
ggtaccattgaggaaaagatctaccaccgacaaatcttcaagcaatttttgacaaacaga
gtgctaaaagatccaaaacaaaggcgctttttcaaatccaatgatctctatgagctgttt
actctgactagtcctgatgcctcccaaggcactgaaacaagtgctatttttgcaggaact
ggctccaatattcagacacctaaatgccatttaaaaaaaaggactccgccagtcctagaa
acggatcccaaatgcaagaagccccctgtttctgacacacctgcaaatggtgccaccctg
atgggagaaaaacctaaggcagtgggagctacaggaagtgtcacttctggagaaagtggt
cctttgaaaggcgaccatcatacaaatggaaacagagctagcaatgttgcttttggagaa
gagatagatgcagggtccacgctagagcatctctcagtgatgagtagagatgggaagtgt
tcagattctccaacagttgaccacacatccaggccatcagttgaggcaagcaccatcgag
aagcagggttcttcctatgaaggggagtgctgccaggctcaggcagaacctgttcccacg
agtgaacaaatggaaggccagttctctaagcacaaatcaaaaaggaaacatgatgcatcg
gaggacgaggccacagagaaacatccacagcccaagcaaaaggccaagaactccaagcat
tgcagagatgctaagtttgagggaactcgagtcccacacctagtgaagaaaaggcggtac
cgccagcaaaccactgagcaggacagtggagccaaggaccgaagcagtgatgattatgtt
ttagaaaagcttttcaaaaaatcagtgggcgtgcacagcgtcgtgaagcatgatgccatc
atagatgggtccagtccggattatgtgctggtggaggcagaagccaaccgagtggctcag
gacgccttgaaagctctgaggctctctcgtcagcaatgcttgggtgcaacatctggtgtc
cccacctggactggccacaggggtatttctggtgcaccaacaggagtaaagaacaggttc
ggtcagaaaaggaattccaacctccctgtgcagcgtccttcatcactaacagaaaggact
cagaacaacatgaaaaaagaggggaaagctcacacccctgagcactttagtggcaaagaa
gatggagcatctttgtctggagcgcccagttcctcctcactcttggccagaatgcgagca
agaaaccacatgattttgcccgagcgcttggagagtgacagcgagcaccttgctgaggct
gctgctgtgcctccctgcagcacggaacacgacgaccttctggtggacatgaggaacttc
attgctttccaggcccaggtggatggccaggccagcactcaggaaatcctgcaggagttt
gagtccaagctgtccgtggcacagtcctgtgtcttccgagaactactgagaaatctgtgc
aatttccatagaactcctggtggtgaagggatttggaaactgaagcccgaatactgctaa
DBGET
integrated database retrieval system
