Mastomys coucha (southern multimammate mouse): 116084316
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Entry
116084316 CDS
T07224
Symbol
Apex1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116084316 (Apex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcoc03400
]
116084316 (Apex1)
Enzymes [BR:
mcoc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
116084316 (Apex1)
DNA repair and recombination proteins [BR:
mcoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
116084316 (Apex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
116084316
NCBI-ProteinID:
XP_031217043
LinkDB
All DBs
Position
Unknown
AA seq
317 aa
AA seq
DB search
MPKRGKKAAADDGEEPKPEPETKKSKGAAKKTEKEAAGEGPVLYEDPPDQKTSPSGKSAT
LKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLTHQYWSA
PSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEFESFVLVTAYVPNAGRGLVR
LEYRQRWDEAFRKFLKDLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFG
ELLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIR
SKALGSDHCPITLYLAL
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagcggggaaagaaagcggcagccgacgacggagaagaacccaaacccgagccg
gagaccaagaagagtaagggggcagcaaagaaaactgagaaggaggcggcaggagagggc
cctgtcctgtatgaggaccctccagatcagaaaacctcacccagtggcaaatctgccaca
ctcaagatatgctcttggaatgtggacgggcttcgagcctggattaaaaagaaaggtttg
gattgggtaaaggaagaagcaccagatatcttgtgcctgcaagagaccaaatgctcagag
aacaaactcccagctgaactgcaagagctgcctggactcacccatcagtactggtcagcg
ccatcagacaaagaagggtacagtggtgtgggcctactttcccgccagtgcccactcaaa
gtctcttatggcattggtgaggaagaacatgatcaagaaggccgggtgattgtggctgaa
tttgagtcctttgtgttggtaacagcctatgttcccaacgcaggcaggggtttggtaaga
ctggaataccgacagcgttgggatgaagcctttcgaaagtttctaaaggacttggcttcc
cgaaagcctcttgtgctatgtggggatctcaatgtggctcacgaagaaattgacctccgt
aaccccaaaggaaataaaaagaatgctggctttactccgcaggagcgccaaggttttggg
gagttgctacaggctgtaccattggctgacagcttccggcatctctaccccaacaccgcc
tacgcttatactttctggacttacatgatgaatgcccgctctaagaatgttggttggcgc
cttgattactttttgctctcccactctcttttacctgcattgtgtgacagcaagatccgg
tccaaggctcttggcagtgaccactgtcccatcaccctttatctagcactgtga
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integrated database retrieval system
