Mastomys coucha (southern multimammate mouse): 116084541
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Entry
116084541 CDS
T07224
Symbol
Ldb3
Name
(RefSeq) LIM domain-binding protein 3 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116084541 (Ldb3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mcoc04990
]
116084541 (Ldb3)
Domain-containing proteins not elsewhere classified [BR:
mcoc04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
116084541 (Ldb3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
PDZ_2
LIM_FHL2-3_N
DUF3854
Motif
Other DBs
NCBI-GeneID:
116084541
NCBI-ProteinID:
XP_031217469
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTM
THLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPIQSPLPVIPHQKVVANSPANADYQE
RFNPSVLKDSALSTHKPIEVKGLGGKATIIHAQYNTPISMYSQDAIMDAIAGQAQAQGSD
FSGASPLASLPVKDLAVDSASPVYQAVIKTQSKPEDEADEWARRSSNLQSRSFRILAQMT
GTEYMQDPDEEALRRSSTPIEHAPVCTNQATSPLLPASAQPPAAASPIAASPTLATAAAA
HAAAASAAGPASSPVENPRPQASAYSPAAATSPASSAHTSYSEGPTAPAPKPRVVTTASI
RPSVYQPVPASSYSPSPGANYSPTPYTPSPAPAYTPSPAPTYTPSPAPTYTPSPAPTYSP
SPAPAYTPSPAPNYTPTPSAAYSGGPSESASRPPWVTDDNFSQKFAPGKSTTTVSKQTLP
RGAPAYNPTGPQVTPLARGTFQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEF
NCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPICAKCNTKIMGEVMHALRQTWHTTCFV
CAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCF
ICAVCHVNLEGQPFYSKKDKPLCKKHAHAINV
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacagtgtgactctgaccgggcctgggccctggggcttccgtctgcagggaggc
aaagacttcaatatgcccctcactatctcccggatcactccaggcagcaaggcagcccag
tcccagctcagccaaggagaccttgtggtggccattgatggggtcaacacagacaccatg
acccacctggaggcccagaataagatcaagtctgccagctacaacctgagcctcactctg
cagaagtccaagcggcctattcccatctccacgacagcaccccctattcagtccccgctg
ccagtgatcccccaccagaaggtggtagccaattctccagccaatgccgactaccaggaa
cgcttcaaccccagcgtcctgaaggactcagccctgtccacccacaagcccattgaagtg
aagggcttgggaggcaaggctactatcatccacgctcagtacaacaccccaatcagcatg
tactcccaggatgccatcatggatgctattgctgggcaggcccaggcccagggcagtgac
ttcagtggggcgtctccgctggcgagcctccctgtgaaagacttggcggtggacagcgcc
tctcccgtgtaccaggctgtgatcaaaacccaaagcaagccggaagatgaggctgatgag
tgggcccgccggtcctctaacctgcagtctcgttccttccgcatcctggcccagatgacc
gggacagaatacatgcaagaccccgatgaagaagctctgcgaaggtcaagcacccctatt
gagcatgctccagtgtgtaccaaccaggccacttccccgctgctgcctgcttctgcccag
ccgcctgctgctgcctctcccattgcggcctcaccaaccctggccacagctgctgccgcc
catgctgctgccgcctctgctgcaggccctgcctcaagccccgtggagaatccgaggcca
caggcctctgcttacagccctgcagcagccacttctccagcatcctctgcccataccagc
tacagcgaaggtccaactgcccctgcacccaagcctcgggttgtaaccactgccagcatc
cggccttctgtctaccagccagtgcctgcatcatcctacagcccatctccaggagccaat
tacagtccgactccttataccccttcgccagctcctgcttataccccctctcctgctccc
acctatactccctctcctgctcccacctataccccctcacctgcacctacctactcacct
tcccctgcaccagcttataccccctcacctgccccaaactatacccctacaccatcagct
gcctacagcgggggcccttcagaatctgcaagtcgtccaccctgggtgaccgatgacaac
ttctctcagaagtttgctcctggaaagagcaccaccactgtcagcaagcagaccctgccc
cggggggctccagcctacaacccaactggcccacaagtgactcctcttgccagaggcacc
ttccagagagctgagcgcttccctgctagcagccggactcctctctgtgggcactgtaac
aatgtcatcaggggcccttttttggtggccatgggccgctcttggcaccccgaagagttc
aattgtgcctactgcaagacctccctagcagatgtgtgctttgtggaggagcagaacaac
gtttactgtgagcggtgttatgagcagttttttgccccgatctgtgccaagtgtaacacc
aaaatcatgggggaagtgatgcatgctctgagacagacatggcacaccacttgcttcgtc
tgcgcagcctgcaagaagccctttgggaacagcctcttccacatggaggatggagagcca
tactgtgagaaagactacatcaacctgttcagcaccaagtgccatgggtgtgatttccct
gtggaagctggtgacaagtttatcgaggccctggggcacacctggcatgacacctgcttc
atttgtgcggtctgccatgtgaatctggagggtcagccattctactctaagaaagacaaa
ccattgtgcaagaagcatgcacatgccatcaacgtgtag
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