Mastomys coucha (southern multimammate mouse): 116084553
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Entry
116084553 CDS
T07224
Symbol
Spata13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
116084553 (Spata13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116084553 (Spata13)
Membrane trafficking [BR:
mcoc04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116084553 (Spata13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_9
SH3_2
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
116084553
NCBI-ProteinID:
XP_031217485
LinkDB
All DBs
Position
Unknown
AA seq
1233 aa
AA seq
DB search
MTTAQDGHGQGATATCSASNPKAPKMVTSSACQNGGCKSSPSSDPEAGETRLSPSKLVRL
FSGSRKRMNSNSERPRSVVLVGNSSTWNALASFRKMGSFKKLKSSVLQGIQNREGAEVSK
EEPTGDPGRAAPNGTIAVLGKGRCTSLGPVGDGAGSDCSDPEDTEDAFQRSTHRSRSIRR
AYGLGRISLLDLGRQPVPESAVCEIQVRDPEPSRAVPLPRRSKSIDSLSVLKSSFKRKSA
SNLTELQGDRQVPPRTLSSFFTDSEKQGGTERRTRRWRSPIRAKDFDRVLRLVSNVKDAA
WKREAPRSADPSPGSGLGDANPLLAPRSKLHDDYSRRTSSSVEPDARRGGPLSSPCIPPA
PCTAAPYAAPEPHLDVDTAVFPLETKSAEPLGSDGPRASSPSPIPTDPEGLSQASSEAHP
GSQHPLDPVQLPTPLRPTTPKPQSPQSPGSTKCPSSLSALSVSSADSEERTEEAVHSQPG
PLSLQDTVLTAGDVGGESGGSCFFTNLDGATHPEERKEEVVTEDDRQGSALEEEQNEAPR
ISRRRWGSGRRTRPRPLSDYGQLASRSLSIPEDAIAADPPDENHVDRMHPASVTTTSQDP
CAPPGCSRGGRRRRPISVIGGVSFYGNTQPAARPPVPAHQVPPYKAVSARLRPFTFSQST
PIGLDRVGRRRQMKTSNVSSDGGAESSALVDDNGSEEDFSYEELCQANPRYLQPGGEQLA
INELISDGSVVCAEALWDHVTMDDQELGFKAGDVIQVLEASHKDWWWGRNEDKEAWFPAS
FVRLRVNQEELPESCSSSHGEEQDEDPSKARHKHPESQQQMRTNVIQEIMNTERVYIKHL
KDICEGYIRQCRKHTGMFTVAQLATIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGS
CFLQHQEGFAIYSEYCNNHPGACVELSNLMKHSKYRHFFEACRLLQQMIDIALDGFLLTP
VQKICKYPLQLAELLKYTTQEHSDYNNIKAAYEAMKNVACLINERKRKLESIDKIARWQV
SIVGWEGLDILDRSSELIHSGELTKITRQGKSQQRIFFLFDHQLVSCKKDLLRRDMLYYK
GRMDMDEVELVDVEDGRDKDWNLSMRNAFKLVSKATDEVHLFCARKQEDKARWLQACADE
RRRVQEDQQMGMEIPENQKKLAMLNAQKAGHGKSKGYNSCPVAPPHQSLPPLHQRHITVP
TSIPQQQVFALAEPKRKPSLFWHTFHKLTPFRK
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagcccaggatggccatgggcaaggtgccacagctacttgttcagcctccaac
ccgaaggcccccaaaatggtaacatcctcagcatgtcagaatggaggctgcaaaagcagc
cccagcagtgatcccgaagccggggaaaccaggctcagcccttccaagctggtacggctc
ttctctggtagtcggaaaaggatgaattcgaactctgagaggcctcgctcggtggttctt
gtggggaattcctccacatggaatgccctggcctccttccgtaaaatgggctcttttaaa
aaactaaaatcttctgtccttcaaggaattcagaaccgagagggggcagaagtttctaag
gaagagccaacaggagacccaggtagggctgctcccaatggcaccattgccgtcctggga
aagggcaggtgtacatccttgggccctgtaggagatggcgccgggtccgactgctcagac
cctgaggacacggaggatgccttccagaggagcacacaccgttcgcgcagcatccgcagg
gcctatggcctgggccgcatcagcctgctggacctggggcggcagccagtgccggagtct
gctgtgtgtgagatccaagtgcgcgaccccgagcccagcagggctgtgcctctaccgcgc
agaagcaagagcatcgacagcttgagcgtcctgaagagctccttcaagcgaaagtctgca
tccaacctcacggaactgcagggtgacaggcaggttccccccaggaccctgagcagcttc
ttcacagactcagagaagcagggtggcacagagagaagaaccagacgctggaggagcccc
atccgggccaaggacttcgaccgagtcctaagactggtgagcaatgtgaaggatgcagcc
tggaagagggaggcccccaggagtgcagaccctagccctggttccggtctgggggatgcg
aacccgctccttgcgccacgaagcaagctacacgatgactactcacgccgtaccagcagc
agcgtggagccagacgccaggcgtggcggccctttgtcctcaccctgtattcctcctgca
ccatgcaccgctgcgccctacgcagctccagaaccccacctagatgtggacacagcagta
ttccccctggaaactaaaagtgctgagccactgggaagtgatgggcctcgtgccagcagt
ccctcaccaatccccacagacccagaagggttgagccaggcctctagtgaggcacatcct
ggcagccagcatcccttggaccccgtgcagcttcccactcctctgaggcccaccacaccc
aagccccaaagccctcagagcccagggagcactaagtgccccagtagtctaagtgcgctg
tccgtcagttcagcggacagtgaggaacggactgaggaagctgtgcacagtcagccagga
cccctgtccctccaggatactgtcctcaccgctggtgatgtggggggagaaagcggtggc
agctgttttttcacgaatctcgatggagccacccatccagaagagaggaaggaagaggtg
gtgactgaggatgaccggcagggctcagccctggaggaggagcagaatgaggcgcctcga
atctccaggaggaggtggggctcggggcggcgcacccggccacgaccactgtctgactat
ggccagctggccagcagaagcttgtccattcctgaagatgccattgctgcagaccctccc
gatgagaaccacgtggacaggatgcacccagcaagtgtgaccaccaccagccaggatcca
tgcgcccccccaggctgttccaggggaggccggagaaggcgacctatatctgtgattgga
ggggtcagcttctatggcaacacccagccagcagccaggcctcccgtgcctgcacaccaa
gttccaccctacaaggctgtgtctgcccgcctccggcccttcaccttctcccagagcact
cccatcgggctggaccgcgtagggcggcgacggcagatgaaaacatccaatgtctcttca
gatggcggtgcggagtcttcggccttagtggatgataatggcagtgaggaagatttcagc
tatgaggagctctgccaggccaaccctcgatacctccagccaggcggggagcagctggcc
atcaatgagctcatcagcgatggcagcgtggtctgtgcagaagcactgtgggaccatgtg
accatggacgaccaggaactgggcttcaaggctggggatgtcatccaggtcctggaagcc
tctcacaaggactggtggtggggccggaacgaagacaaagaggcctggttccctgcaagc
tttgttaggcttcgagtcaatcaggaggagctgcccgagagctgcagcagctcccatggg
gaggagcaggacgaggaccccagcaaagcccgccacaagcaccccgagagccagcagcag
atgcggaccaatgtcatccaggagatcatgaacaccgagcgagtgtacatcaagcacctc
aaggacatctgcgagggctatatccgacagtgtcgtaagcacacgggaatgttcaccgtt
gcacagctagccactatttttggaaacattgaagacatttacaaattccaaagaaagttt
ctgaaagaccttgagaaacagtacaacaaagaggaacctcacttgagtgaaatcggatcc
tgctttcttcagcaccaagagggctttgccatctactctgagtactgcaacaaccaccca
ggcgcctgtgtggagctgtcgaacctcatgaagcacagcaagtaccggcacttcttcgag
gcctgccgcctgctccagcagatgatcgacatcgctctggatggcttcctcctcacgcct
gtgcagaagatctgcaaatacccactgcagctggctgagctgctcaagtacaccacacag
gagcacagtgattacaacaatataaaggcagcctatgaagccatgaagaatgtggcctgc
ttgatcaatgaacgcaagcgcaagctagagagcatcgacaagattgcccgctggcaggtg
tccatcgtgggctgggagggcctggacattctagaccgaagctccgagttgatccattcg
ggagagctgaccaaaatcaccaggcagggcaagagccagcagcgcatcttcttccttttc
gaccaccagctggtgtcctgcaagaaggacctgctgcgcagggacatgctgtactacaag
ggccgcatggacatggatgaagtggagcttgtggatgtagaggacgggcgagacaaagac
tggaacctcagcatgcggaatgccttcaagttggttagcaaagccacagatgaggttcat
ctgttctgcgccagaaagcaggaagacaaggccaggtggctacaggcctgtgcggacgag
aggcggcgggtgcaggaggaccagcagatgggaatggaaatcccagaaaatcagaagaag
ctcgccatgttgaacgcccagaaggcagggcatggcaaatctaaaggctacaacagctgc
cccgtggccccaccccaccagagcctgccgccccttcaccagcgccatatcactgtgccc
accagcatcccacagcagcaggtctttgccttggctgagcccaagaggaagccgtcgctc
ttctggcacactttccataaactcacccccttccggaaatga
DBGET
integrated database retrieval system
