Mastomys coucha (southern multimammate mouse): 116084910
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Entry
116084910 CDS
T07224
Symbol
Pcdh8
Name
(RefSeq) protocadherin-8 isoform X1
KO
K16499
protocadherin delta 2
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcoc04515
]
116084910 (Pcdh8)
Cell adhesion molecules [BR:
mcoc04515
]
Cadherins
Protocadherins
116084910 (Pcdh8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
116084910
NCBI-ProteinID:
XP_031218062
LinkDB
All DBs
Position
Unknown
AA seq
1069 aa
AA seq
DB search
MSPAKRWGSPCLFPLQLFSLCWVLSVAQSKTVRYSTFEEDAPGTVIGTLAEDLHMKVSGD
TSFRLMKQFNSSLLRVREGDGQLTVGDAGLDRERLCGQSPQCVLAFDVVSFSQEQFRLVH
VEVEVRDVNDHAPRFPRSQIPVEVSESAPVGTRIPLEVPVDEDVGANGLQSVRLAEPHSP
FRVELQTRADGAQCADLVLLQELDRESQASYSLELVAQDGGRPPRSATAALSVRVLDAND
HSPAFPQGAVAEVELAEDAPVGSLLLDLDAADPDEGPNGDVVFTFGARTPPEARHLFRLD
PRSGRLTLAGQVDYERQDTYELDVRAQDRGPGPRTATCKVIVRIRDVNDNAPDISITPLA
APGAPATSPFAAAAAAAALGGADAASSAGSGTQEAGVTSLVPEGAARESLVALVSTSDRD
SGANGQVRCALYGHEHFRLQPAYAGSYLVVTAASLDRERIAEYNLTLVAEDRGTPPLRTV
RPYTVRVGDENDNAPIFTKPVYEVSVRENNPPGAYLATVAARDPDVGRNGQVTYRLVEAE
VGRSGEAVSTYVSVDPATGAIYALRSFDYETLHQLDVRVQASDGGSPQLSSNALVQVRVL
DQNDHSPILVHPAPANGSLEVAVPGRSTKDTAVARIQARDADEGANGELAFDLLQQEPRE
AFSIGRHTGEIVLTGDLSQEPPGRVFKALLVISDGGRPPLTTTATVSFVVTAGGGSAVPA
SPGSPEHSRPPGSRLAPSGPSLQWDTPLIVIIVLAGSCTLLLAAIIAIATTCNRRKKEVR
KGGALREERPGAAGGGASAPGSPDETARGTGPRPNMFDVLTFPGSGKAPFGSPAADAPPP
AVAAAEVPGSEGGSATGESACHFEGQQRLRGAHAEPYGASPGFGKEPAPPVAVWKGHSFN
TISGREAEKFSGKDSGKGDSDFNDSDSDISGDALKKDLINHMQSGLWACTAECKILGHSD
RCWSPSCAGPNVHPPPHPPAQMSTFCKSTSLPRDPLRRDNYYQAQLPKTVGLQSVYEKVL
HRDYDRTVTLLSPPRPGRLPDLQEIGVPLYESPPGGRYVSPKKGTNENV
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgagtcctgcgaagcgctggggcagcccttgccttttccccttgcagctgtttagtctc
tgctgggtgctctcggtggcccagagcaagacagtccgatacagcaccttcgaagaggat
gcccctggcacagtcatcgggaccctggccgaagacctgcacatgaaagtgtctggagac
acaagcttccgcctgatgaagcaattcaacagctctctactccgggtacgcgagggcgac
gggcagctaaccgtcggggatgcgggcctggaccgggagcgtctgtgtggccagtcccca
cagtgcgtgctggccttcgatgttgtcagcttctcgcaggaacaattccgcctggtgcac
gtggaggtggaggtgagggatgtaaacgaccacgcgccccgctttccccgatcccagatc
ccggtggaggtctcagagagtgctccggtaggcacgcgcatccccctggaggtgcccgtg
gacgaggacgtgggtgccaacgggctgcagagtgtacgcctggccgagcctcacagcccc
ttccgcgtggagctgcagacgcgcgcggacggtgcccagtgtgcggacctggtgctgctc
caggagctggaccgcgagagccaggcctcctacagcctggagctggtggctcaggacggc
gggcgaccgccgcgttccgccacagcagccctcagcgtgcgtgtgctagatgccaatgac
cacagcccggccttcccgcagggtgccgtggccgaggtcgaactggccgaggacgcacct
gtgggatcgctgctgctcgacctggacgcggccgatcccgacgaaggtcccaacggcgac
gtggtgttcaccttcggcgcccgcacccctcccgaagcccgtcaccttttccggctcgac
ccgcgctctggccgcctcaccttggccggccaggtggactacgagcgccaggacacctac
gagctggacgtgcgggctcaagaccgaggcccggggccccggactgccacctgcaaggtc
atcgtgcgcatccgagacgtcaacgacaacgctcccgatatttctatcaccccgctggcc
gccccgggggctccagccacctctcccttcgccgccgccgccgctgccgccgcactcgga
ggagcggacgcggcctcttcggctgggtctgggacacaggaagccggcgtcacctcgctg
gtgccagagggggcggcgcgcgagagcttagtggcgctggtcagcacctcggacagggac
tcgggcgccaacgggcaggtgcgctgcgccctctacgggcacgagcactttcggctgcag
ccggcctacgcgggcagctacctggtggtgaccgccgcatctctggaccgggagcgcatc
gcggagtacaacctgacgctggtggccgaagaccgtggcacaccccctctgcgcaccgtc
cggccctacaccgtgcgcgtgggtgacgagaacgacaacgcaccgatcttcaccaagccg
gtctacgaggtgtcggtccgcgaaaataaccctccgggcgcctacctggccacagtggca
gcccgcgaccctgacgtgggtcgcaacggtcaggtcacctaccgcctggtagaggccgaa
gtgggccgctccggggaagccgtgtccacttacgtctcagtagacccggctaccggggcc
atctacgcgctgcgtagctttgactatgagactctgcaccaacttgacgtgcgtgtccag
gccagcgacggcggttcccctcagctttccagcaatgctctagtgcaagtgcgggtgctg
gaccagaatgaccactctccgatcctcgtgcatccggcgccggccaatggctccctagaa
gtagcggtccctgggcgttccaccaaggacacagctgtagcgcgcatccaggcccgggat
gcggacgaaggagccaacggggaactggccttcgatctgctgcagcaggagccacgagag
gccttctccataggccgccacacgggggagatcgtgctcaccggagacctctcgcaggag
cctcctggccgcgtgttcaaggccctgctggtcatatccgacggcggccgcccccctctc
accaccacggcaaccgtcagtttcgtggtgacagccgggggtgggtcagctgtgcctgcc
agccccgggagcccagagcactcccggccacctggctctcgcctcgcgccatcggggcct
tcgctgcagtgggacacgccgctgatcgtcatcatcgtgttagccgggagctgcacgctg
ctgcttgcagccatcatcgccatcgccactacctgcaaccgccgcaagaaggaggtgcgc
aaagggggggccctccgggaagagcggcccggggcggcgggcggcggagcctcggcccct
ggctccccggatgagaccgccaggggaactgggcccaggcccaacatgttcgacgtgctc
accttccctggcagcggcaaagcgccctttggcagccccgcggccgacgcgcccccgccc
gcggttgccgcggccgaagtgccgggctcggagggcggcagcgccactggggaaagcgcc
tgtcacttcgaggggcagcagcggctccgaggcgcgcacgccgagccctacggtgcctct
ccaggcttcgggaaggagcctgcaccccctgttgcagtctggaaaggccattcattcaat
accatctccggccgagaagctgagaagttcagtgggaaagacagcgggaaaggagacagt
gatttcaatgacagtgactcggacatcagcggagacgctttgaagaaagacctcatcaac
cacatgcagagtggactgtgggcgtgcactgctgagtgcaagatcctaggccattctgat
cgctgctggagcccatcctgtgctggacccaacgtacacccccctcctcacccaccagcc
cagatgtcaaccttctgtaagagcacgtccctgcctcgggatcctctgcgcagggacaat
tactaccaggcccagctccccaagacagtggggctgcagagcgtctatgagaaagtactg
catagagactatgacaggacagtcaccttactctcccctccccgtccaggaaggctccca
gacctgcaggagatcggagtacccctctatgagtcccctcctggtggcagatatgtgtcc
ccgaagaagggaaccaatgaaaatgtgtaa
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integrated database retrieval system
