Mastomys coucha (southern multimammate mouse): 116084945
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Entry
116084945 CDS
T07224
Symbol
Rp1l1
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein
KO
K19538
retinitis pigmentosa 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mcoc03037
]
116084945 (Rp1l1)
04812 Cytoskeleton proteins [BR:
mcoc04812
]
116084945 (Rp1l1)
Cilium and associated proteins [BR:
mcoc03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
116084945 (Rp1l1)
Cytoskeleton proteins [BR:
mcoc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
116084945 (Rp1l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
Motif
Other DBs
NCBI-GeneID:
116084945
NCBI-ProteinID:
XP_031218122
LinkDB
All DBs
Position
Unknown
AA seq
1880 aa
AA seq
DB search
MNSTPGGTRNAPVPPSHPAPSHPTPSHRQCLLPSVAHTPSVTEVTPAKKITFLKRGDPQF
AGVRLAVHQRTFKTFSALMDELSQRMPLSFGVRSVTTPRGLHGLSALEQLQDGGHYLCSD
RKPPKTHREPGRLQRKSPSAGQSQVFEGGHEAPEASSSWKGPMAPRRLTLVKNGDPRCQQ
TVVLSHKNTRNLAAFLSKASELLHFPVKQVYTIRGKKVDSLQTLLDGPSLLVCAGNEAFR
RLEMENDRGNRSRMLAGVTARRERGFWGPNAKQSVIHSRGRSGGKLRQFSLTSERSGLSD
HPASGHQAWPGPALDKCPQDTPARPGSLVAADDVEKKVCMNEDGSLSVEMKVRFQLLGED
TLRWSQRVGQASVFTVASGEGQDLREADRFCCRQEGYPCGVLKPGAQELDPYDGGCQGIF
DVGQQSRPSYDIWRNPLTTPEGTGPTPRRRWGLAKLSGSKSHWRQRDNDRKGHDKENASP
VSTPRHPRSAQPGSCCPWTPDSDTGSDTLHPVSSASSQSQTELESGEGPCLEDTGSHSFR
PQTQSIERALSVTSVSAESHKESSESGGQFYRGSSQTRVMASQAQVTKGDNPCISTQSHL
PLNHTSLRTEKYKQGTRCQEVRGEPVLRRPLVPGYSGSQDTQRDALPAPARAPAQRKQRK
QKRPAGFVCLPSVSIPYQVAQKGHARQCHYCGDTQSSLDTALQMPVPQEREQVYPGSPAL
QSPSNSPSAGNQASEVLRSPFSSSLDFREPQATSKATTMAVSDSDRVSSFCHPSTQSVEP
AGDAKGQAHSSAPTPVHRGEAGCPWEKAGTTPEPFSSSELLERCPETEDPRAYCNCCCLQ
VAPSSPLAAPSGQTQASISEACLGGSSFCPTPPKGQTCSGREPSSSSSTSRDHSQADGYA
GPGETLLGKSPGIRGSLEEGEEDGGVTPSALPYTSPDAVVREWLGNIPEKPVLMTYEMAD
ENTEVPSDGPEGPKEDLDNGCFFKVLEELTQPRQQPPEKVADEYPEPVGVLSGPGSVCCK
LGGDLHSDATSGERLKASPDARIGEGTTVDHGVKLCALPTRVSASTQIMKALLGSKPGRP
SSLPEVSSTVAQRLSCSAGAFIACLARLHFFDKDLGPLDSKVRLEESPKYQEMLSISQTL
WPGNEVGQGKLDFSLRKLTSHQALLGTEDFTPTSSSGVDVNSGSGGSGEGSVPCVTDLSS
ILKIPSQRPDSRSQSYSELVSHSTVSSGSQVRACATSGEEAGKGGRKQMWGSVPEQSIES
VMLEGDAGSEETERRVKERLQENSIHGEELLEEGARVCSQEMLAAGSQDGTGLPEDTRVS
TDEAGADAASGGPRPLDGREQPTESPQHFSESNSRVSEHQSAHILELGSEEMSKVDARGC
KQACIKASSETRETNTFMAHKGSLDPDPIWVSKLLKKIEKAFMTHLADATAELQARWNLH
DNNLLDQMVTELEQDVGRRLQTSTVLEVRKIQSRAGRMVPEPPREALRGQSSLQTEQRRR
RLQGLRNFSALPGQGPLSLSQEDGPTLKTALRTRSGTGPVEDEFCPCEICLKKKRTPRIP
KDATKVSGAPVRKAFDLQQILQCKKGRISHREAMEVAPQKTGMMLSQEDPGTTQGADEKQ
GLKLAQGLGVAEGEEWEGKQKLRAEEDPEILKAEGAGCHSPEKNASTGENGKICIGTAQE
SQQLDGTEMGKEETLYQSFRDGGTLESPSRQDGHSVEIQEASRERQWEIEGRNQDVKEDS
PWGSSGESQGRVGSENTSLDQEGRLPNHPPRPGLQSHLAACSSRASSLDNCSQVSQKGSD
GGFPSRDLKCSKAKNSRVLQAEGKVPMMYPESSSSEQEEAPSSPRPPKQGKGEDDRSAGS
LACTQVRGRVDSFGQDDLDF
NT seq
5643 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaccccaggaggcacgaggaatgctcctgtaccaccaagccaccctgcacca
agccaccctacaccaagccaccggcagtgtctcctgccctccgtggctcacactccctcc
gttactgaggtgacaccggctaagaagataaccttcctcaaacgaggagatccccagttt
gctggggttcgcctggctgttcaccagcgcactttcaagaccttcagtgccctaatggat
gagctgtctcagcgcatgcctctttcctttggggtgcgttccgtcaccacaccccggggc
ttgcatggcctcagtgccctggagcaactgcaagatgggggccactacctctgctctgat
aggaagccccctaaaactcacagagagccaggccggcttcaacggaaaagcccctctgct
gggcagtcacaggtttttgaaggtgggcatgaagctccagaagcatcctcttcctggaag
ggtcccatggccccaaggaggctgacactggtgaagaacggggatcctagatgccagcag
acagtggttctcagtcacaagaacaccaggaatctggcagcctttctcagcaaagcctct
gagcttctgcactttcctgtcaagcaggtgtacacgatccgtgggaagaaggtggactct
ctgcagacactcctggatggcccctccctgctggtatgtgctggtaacgaggccttcaga
cgtctggagatggaaaatgacagagggaacaggagcagaatgctagctggtgtgactgca
aggcgtgaacgtggtttctggggaccaaatgccaagcaaagtgtcatacactcgaggggc
aggtctggaggcaagctgcggcagttttccttaacgtcagagaggtctggtctcagtgac
catcctgcatccggtcatcaagcctggccagggcctgctttggacaagtgccctcaggac
acacctgcccgacctggttccttggtagctgctgatgatgtggagaagaaggtctgcatg
aatgaggatggcagtctgtctgtggagatgaaagtccgcttccagcttctgggcgaggac
accctgcggtggtcccagagggtggggcaggccagtgtcttcacagtagccagtggagag
ggtcaggacctgagggaggctgacaggttctgttgcagacaggagggctacccttgcggt
gtcttaaagcctggggcacaggaactggatccctatgatggaggatgccagggaatcttt
gacgtaggccagcagtcacggcccagctatgacatatggaggaaccccttgaccacccct
gagggcacagggccaactcctcgaaggagatggggtctggctaagctctctggaagcaag
agccactggagacagagagacaatgataggaaagggcatgacaaggagaatgccagccca
gtctcaactcccaggcaccctagaagtgcccagccaggctcctgctgtccttggactcca
gacagcgatacaggcagtgacaccttgcatccagtctcctcagcttcttcccaaagtcag
actgagctggaatctggtgagggcccctgcctagaggacacaggatcccatagcttcaga
cctcagacccaaagtatagaaagggccctgtctgttacgtcggtcagtgctgagtctcac
aaggagtctagtgagagtggtggtcagttctacagaggctcaagccagacaagggtcatg
gcttcccaggcacaagtcaccaaaggtgacaacccttgtatttccacccagagtcactta
cccttgaaccacacaagtcttcggacagagaagtataaacagggcaccaggtgccaggag
gtcagaggtgagcctgtactgagacggcccctggttccaggctattctggctctcaggac
acacagagagatgctctcccagctcctgcccgtgccccagcccagcggaagcagagaaag
cagaagaggccagctggttttgtgtgcttgcccagtgtctctatcccttaccaagtggct
cagaaaggccacgccaggcagtgtcactactgcggggacactcagtcctcactagacaca
gctttgcaaatgccagtgcctcaggaaagagaacaggtctacccaggaagcccagcactg
caatctccttcaaactcacccagtgctgggaatcaggcctccgaggttctgagatcccca
ttctctagttcccttgattttcgggaaccccaagccaccagcaaagccaccaccatggcc
gtaagtgactcagaccgtgtgtccagcttttgtcatcccagcactcagtctgtggagcca
gcaggggacgccaagggccaggctcactcatcagctcccacacctgtccacagaggagag
gctggttgcccgtgggaaaaggcagggaccacccctgagcctttctcatcctccgagcta
ctggaaagatgccctgagacagaagatccaagagcctactgcaattgctgctgcttacag
gttgcgccttcttctccccttgcagcccccagtggtcagacacaagcctccatctctgag
gcctgcttagggggcagtagtttctgcccaactccacccaaggggcaaacatgctctggg
agggagccctcaagcagcagtagtaccagccgtgaccacagtcaagccgatggctatgct
gggccgggggagactctgctggggaagtcccctggcatcaggggaagccttgaggagggg
gaagaggatggtggtgtaacgcccagtgctctgccgtacacctctccagatgctgtggtt
cgtgagtggctaggcaacatcccagaaaagccagtactcatgacatatgagatggcagat
gagaacacagaagtgcccagtgatggcccagaaggtcccaaggaggacctggataatggt
tgttttttcaaagttcttgaggaactgactcagcccagacagcaacccccagaaaaagtt
gctgatgagtacccagagccagtgggtgtcctttcaggacctggttctgtgtgctgcaaa
ctgggaggtgatctgcattcagatgcaacatcaggtgaaaggctcaaggcttctccagat
gccagaataggagaagggaccacagtggaccatggtgtgaaactatgtgcactccccacc
agggtctcagcctctacacagatcatgaaggctctgctgggctccaagccaggccgaccc
agcagtctaccagaggtctctagcacagtagcccagaggctcagctgctctgctggggcc
ttcattgcctgccttgccaggctccatttctttgacaaggatctggggcctctggatagc
aaagtgaggcttgaagagtcccctaagtaccaggagatgctgagcatctcccagaccctg
tggccggggaatgaggttgggcaaggcaagctggacttcagcctcaggaagctcacttca
caccaggctctgctggggaccgaggacttcacgcccacgtcctcctctggtgtggatgtg
aacagtggctctggaggctcaggtgagggcagtgtgccctgtgtcacagatttgtcctca
attttgaaaattccctctcaaagacctgattccaggagccagagttactcagagctagtg
agtcattccacagtctcatctggctcccaggtgagggcttgtgccaccagcggggaggag
gcgggtaaaggaggcaggaagcagatgtggggcagtgtcccagaacaatcgattgaaagc
gtgatgctggaaggggatgcagggtcagaggaaacagaaaggagagtaaaagaaaggcta
caggaaaacagcatccatggagaagagcttctagaagaaggggctagggtctgcagtcag
gaaatgcttgcagctggctctcaggatgggacaggtttgccagaagataccagagtgtca
acagatgaagcaggagctgatgcagcctctgggggaccgcggcccctagatgggagagag
caacccacagagtctcctcagcattttagtgagagcaactcaagagttagtgagcatcaa
agtgctcacatcctggagctgggatcggaagagatgtccaaagtggatgcaaggggctgc
aagcaagcctgcatcaaggccagctcagaaaccagggagacgaacacattcatggcccac
aagggatctctggaccctgacccaatctgggtgtccaagctgctgaagaagatagagaaa
gccttcatgactcacctggctgatgccacagctgaactccaagcccgatggaaccttcat
gataacaacctgctggaccagatggtgaccgagctggagcaggatgtgggccggcggttg
caaacaagcactgtcttggaagtcaggaagatccagagccgggcagggaggatggttcca
gagccaccccgggaagccctcagaggccagagttctctacagacagagcagcgcaggcgt
cgccttcagggcttgcgcaacttctcagccctccctggccagggccctctctccctctcc
caggaggatgggcccacactcaaaacagccttaaggaccagatcaggtacagggcctgtg
gaagatgagttctgtccctgtgaaatctgtctgaagaagaagaggacccctagaatccca
aaggatgccacaaaagtctctggtgctccggtcagaaaggcctttgatctgcagcagatt
ctacagtgcaagaaaggaagaatcagtcacagagaggccatggaggtggcccctcagaag
acagggatgatgttgtctcaggaggatcccggaactacccagggagctgatgagaagcaa
gggctgaagttggcacaagggcttggggtagctgagggagaggagtgggaaggaaagcag
aagctgcgagcagaggaggatcctgagattttgaaagcagaaggagctggttgccattca
ccagaaaagaatgcatccactggggaaaatgggaaaatctgcatcggcactgcccaagaa
agccagcagttagatgggactgagatggggaaggaggaaaccctgtaccagagctttaga
gatggaggcactttagaatctccatcaagacaggatggccactctgtggagattcaggaa
gcttccagagaaagacagtgggagatagaaggaagaaatcaagatgtaaaggaagacagc
ccttgggggagctcaggagagagccagggaagggtgggttctgaaaacaccagcctagac
caagaggggaggcttccgaaccaccctccaaggccaggcctgcagagccacctcgcagca
tgctcctccagggcatcgtctctggacaactgctcacaggtgtctcagaagggctcagac
ggaggctttccaagtagagacctcaagtgcagcaaagccaagaacagcagggtcttgcag
gcagaggggaaagtccccatgatgtatccagaaagttcctcttctgagcaagaagaagcc
ccctccagcccaaggcctccaaagcagggaaaaggggaagatgaccgatcagctggaagc
ttggcttgtacccaggttaggggcagggtagacagctttggccaggatgacttagatttc
tag
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integrated database retrieval system
