Mastomys coucha (southern multimammate mouse): 116085275
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Entry
116085275 CDS
T07224
Symbol
Vcl
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04510
Focal adhesion
mcoc04520
Adherens junction
mcoc04670
Leukocyte transendothelial migration
mcoc04810
Regulation of actin cytoskeleton
mcoc04820
Cytoskeleton in muscle cells
mcoc05100
Bacterial invasion of epithelial cells
mcoc05146
Amoebiasis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116085275 (Vcl)
04520 Adherens junction
116085275 (Vcl)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116085275 (Vcl)
04810 Regulation of actin cytoskeleton
116085275 (Vcl)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
116085275 (Vcl)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
116085275 (Vcl)
09174 Infectious disease: parasitic
05146 Amoebiasis
116085275 (Vcl)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mcoc04812
]
116085275 (Vcl)
04147 Exosome [BR:
mcoc04147
]
116085275 (Vcl)
Cytoskeleton proteins [BR:
mcoc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
116085275 (Vcl)
Exosome [BR:
mcoc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116085275 (Vcl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
VMAP-M0
Motif
Other DBs
NCBI-GeneID:
116085275
NCBI-ProteinID:
XP_031218604
LinkDB
All DBs
Position
Unknown
AA seq
1066 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIR
QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL
DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE
LCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRA
VANTRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD
LLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFS
DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLGATAEKAAAVGTANKSTVEG
IQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP
DFPPPPPDLEHLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMM
AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtttcatacgcgcacgatcgagagtatcctggagccagtggctcagcagatc
tcgcacttggtgattatgcacgaggagggcgaggtggacggcaaagccattcctgacctc
accgcgcccgtggccgccgtgcaggcggccgtcagcaacctcgtccgggttggaaaggag
accgttcagaccactgaggatcagattttgaagagagatatgccaccagcatttattaag
gttgagaatgcttgcaccaagcttgttcaggcagcccagatgcttcagtcagacccatac
tcggttcctgcgcgggattacctcattgatggctctaggggaatcctttccggcacgtct
gacctactgcttacctttgatgaggctgaggtccgtaaaattattagagtttgcaaagga
attttggaataccttacagtggcagaggtagtggagactatggaagacttggtcacttac
acaaagaatcttgggccaggaatgactaagatggccaaaatgattgatgagagacagcag
gagttgactcaccaggaacaccgagtgatgctggtgaactcaatgaacactgtcaaagag
ctgcttcctgttctcatttcagctatgaagatttttgttacaaccaaaaactcaaaaaac
caaggaatagaagaagctttgaaaaatcgaaattttactgtagaaaagatgagtgcagag
attaatgagatcattcgtgtactacaactcacttcctgggatgaagacgcctgggccagc
aaggacactgaagccatgaagagagcactggcgtccatagactccaaactgaaccaggcc
aaaggttggctccgtgaccccaatgcctccccaggggacgctggagagcaagccatcagg
cagatcttagatgaagctgggaaagttggtgaactttgtgcaggcaaggaacgcagggag
atcctcggaacctgcaaaatgctagggcagatgactgaccaagtggctgacctccgagcc
agaggacaaggggcctcaccagtggccatgcagaaggcccagcaagtgtctcagggtctt
gacgtgcttactgcgaaagtggaaaatgcagctcggaagctggaagccatgacaaactca
aaacagagtattgcaaagaagattgatgctgcccagaattggctggcagatccaaatggt
ggacctgaaggagaagaacagattcgaggggctttggctgaagcccggaagattgcagaa
ttatgtgatgatcctaaggagagagatgatatcctccgctcccttggagagatagctgct
ctgacctctaaactaggagacttgcgtagacaggggaaaggagactcgccagaggctcga
gccttggctaaacaagtggcgacggcactacagaacctgcagaccaaaaccaacagagct
gtggccaacaccagacctgccaaggcagctgtccacctcgagggcaagattgaacaggcg
cagcgatggattgataatcctacagtagatgaccgtggagtcggtcaggctgccatccgt
ggacttgtggctgaagggcatcggctggccaacgtcatgatgggaccttaccgccaagat
cttcttgccaagtgtgaccgtgtagaccagctaacagctcagctggctgacctggctgcc
cgaggggagggggagagtcctcaggcgagagcacttgcatcccagcttcaagactcctta
aaggatcttaaagcccagatgcaggaagctatgactcaagaggtatctgatgttttcagt
gatactacaactcccatcaagctgttggcagtggcggccaccgctcctcctgatgcgccc
aatagggaagaggtatttgacgagagggcagccaactttgaaaaccattcaggaaggctt
ggagccacagcagagaaggcagctgctgttggaactgccaataaatcgacagtggaaggc
attcaggcatctgtgaagacagcccgagaactcactccccaggtcatctcagctgctcga
atcttactgagaaaccctggtaaccaagctgcttatgaacattttgagaccatgaagaac
caatggattgataatgttgaaaaaatgacagggctggtggatgaggctattgataccaaa
tctctgttggatgcttctgaagaagcaattaaaaaagacctggacaagtgtaaggtagcc
atggccaatattcagcctcagatgctggttgctggagcaaccagtattgctcgtcgggcc
aaccggattctgctggttgctaagagggaggtagagaactctgaggacccgaagttccga
gaggctgtgaaagctgcctctgatgaactgagcaaaacaatctcccccatggtgatggat
gccaaggctgtggctggaaacatctctgaccctggcctgcaaaagagcttcctggactca
ggatatcggatcctgggagctgtggccaaggtcagagaagccttccaacctcaggagcct
gacttcccgcctcctccaccagaccttgaacacctacgactaactgatgagctggctcct
cctaaaccacctctgcctgagggtgaagtccctccacccaggcctccaccaccagaagag
aaggatgaagagttccctgagcagaaagctggggaggtgattaaccagccaatgatgatg
gccgccaggcagctccatgatgaagctcggaaatggtctagcaagggcaatgacatcatt
gcagcagccaagcgcatggctctgctgatggcagagatgtcacggctggtaagagggggc
agtggtaccaagcgggcacttattcagtgtgccaaggatatcgccaaggcctccgatgag
gtgacgagattggccaaggaggttgccaagcagtgcacagataagcggattagaaccaat
ctcttacaggtatgtgagcgaatcccaactataagcacccagctcaaaatcctgtccaca
gtgaaggctaccatgctgggccggaccaacatcagtgatgaggagtctgagcaggccaca
gagatgctggttcataatgcccagaacctcatgcagtctgtgaaggagactgtgcgggag
gcagaagctgcttcaatcaaaattcgaacagatgctggatttacactgcgctgggtcaga
aagactccctggtaccagtag
DBGET
integrated database retrieval system
