Mastomys coucha (southern multimammate mouse): 116085410
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Entry
116085410 CDS
T07224
Symbol
Ercc4
Name
(RefSeq) DNA repair endonuclease XPF isoform X1
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03420
Nucleotide excision repair
mcoc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
116085410 (Ercc4)
03460 Fanconi anemia pathway
116085410 (Ercc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcoc03032
]
116085410 (Ercc4)
03400 DNA repair and recombination proteins [BR:
mcoc03400
]
116085410 (Ercc4)
DNA replication proteins [BR:
mcoc03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
116085410 (Ercc4)
DNA repair and recombination proteins [BR:
mcoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
116085410 (Ercc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
Motif
Other DBs
NCBI-GeneID:
116085410
NCBI-ProteinID:
XP_031218889
LinkDB
All DBs
Position
Unknown
AA seq
916 aa
AA seq
DB search
MEPGLPGERRSMAPLLEYERQQVLELLDSDGLVVCARGLGTDRLLYHFLRLHCHPACLVL
VLNTQPAEEEYFINQLKIEGVEHLPRRVTNEITSNSRYEVYTQGGIIFATSRILVVDFLT
GRIPSDLITGILVYRAHKIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVER
VMRSLFVKKLYLWPRFHVAVNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKEL
KCHNPSLEVEDLSLENALGKPFDKTIRHYLDPLWHQLGTKTKSLVQDLKILRTLLQYLSQ
YDCVTFLNLLESLRATEKVFGQNSGWLFLDASTSMFMNARSRVYRVPDVKLSKKAKTSEK
MASPEGQETKRELVLESNPKWEALTEVLKEIEAENKESEALGGPGQVLICASDDRTCCQL
RDYLTAGAETFLLRLYRKTFEKDGKAEEMWVNFRKGDVPKRATKSDKRPKDAPNKERASA
KRGALKRKKRELTLTQVLETAKEPPEERALEEDLCRQTSSSTEGCGGEIKHESFDLNVSS
DAAYGILKEPLTIIHPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYRASRPG
KPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVPEEREGRDETNLDLARGT
AAMDAPTDTRKAGGQERNGTQSSIVVDMREFRSELPSLIHRRGIDIEPVTLEVGDYILTP
ELCVERKSVSDLIGSLHSGRLYSQCLAMSRYYRRPVLLIEFDPSKPFSLAPRGAFFQEMS
SSDVSSKLTLLTLHFPRLRLLWCPSPHATAELFEELKQNKPQPDAATAMAITADSETLPE
SDRYNPGPQDFVLKMPGVNAKNCRSLMNQVKNIAELATLSLERLTSILGHSGNAKQLHDF
LHTAYADLVSKGRVRK
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggagccgggcctaccgggcgaacgccggagtatggcgccactgttggagtacgagagg
cagcaggtgctggaactgctcgacagcgacgggctggtggtgtgtgcccgcggactcggc
accgaccggctcctctaccatttcctgaggcttcactgccacccggcctgcctggtgctt
gtgctcaacacacagccggccgaggaggaatattttatcaatcagttgaagatagaagga
gttgaacacctccctcgacgagtgacaaatgaaatcacaagtaacagtcgctatgaagtc
tacactcagggtggtattatatttgcaacaagccgaatactcgtggttgatttcttgaca
ggtagaataccttcagatttaataactggcatcctcgtgtacagagcacacaagatcatt
gagtcctgccaggaagccttcatcctgcgtctcttccgccagaaaaacaagcggggcttc
atcaaagctttcaccgacaatgctgttgcctttgacactggcttttgtcatgtggaaaga
gtgatgaggagcctttttgtgaagaagctctacctgtggccaaggttccatgtagcagtc
aactccttcttggaacagcacaagcctgaagtcgtagagattcatgtgtccatgaccccc
gccatgcttgccattcagacggccattctagacatcttaaatgcatgtctgaaggaactg
aaatgccacaacccatcgctagaagtagaagatttgtcattagaaaacgctcttgggaag
ccattcgacaagacaatccgccattacttggaccctttgtggcaccagcttggaaccaaa
actaaatccttggtgcaggatttgaaaatactaagaactttactgcagtatctctctcag
tatgattgtgttacatttcttaatcttctggaatctcttagagcaacggagaaggtattc
ggtcagaattcaggttggctttttctggacgctagcacctccatgttcatgaatgctcgc
tcccgagtttaccgtgttccagatgtcaaactgagcaaaaaggccaaaacatcagaaaag
atggcgagtcctgaaggacaagaaacaaaaagagaactggttctagaaagcaatccaaag
tgggaggcgctgactgaagtcctgaaagaaatcgaagcagaaaataaggagagcgaagcc
cttggtggcccaggccaggtgctgatctgtgctagtgatgaccgcacatgctgccagctg
agagactacctgactgcaggagcagaaaccttcctgctgcggctctacaggaaaaccttt
gagaaggatggcaaagctgaagaaatgtgggtaaattttagaaagggggacgtcccaaag
agagctacgaaatctgacaaaagaccaaaagatgccccaaacaaagagcgtgcttccgcc
aaaaggggggctctcaaaagaaagaaacgagagctgactctgacgcaagtgttggagact
gctaaggagccgccagaggaaagggctttggaagaagacctgtgcagacagaccagcagt
agcacagaaggctgcgggggagagattaagcatgaatcatttgatttaaatgtgtcatcc
gatgcggcctatggcatcctgaaagagcccctgaccatcatccatccgcttctggggtgc
agcgacccctatgccctgacgcgggtattgcacgaggtggagcccagatacgtggttctg
tatgatgcagagctcacctttgttcggcaactggagatctacagggctagcaggcctggg
aaacctctgagggtttactttcttatatacggaggctccacagaagagcagcgctacctg
actgctctacggaaagaaaaggaagcttttgaaaagctcataagagaaaaggctagcatg
gttgtccccgaagaacgggaaggcagagatgaaaccaacctggacctagcaagaggcaca
gcagccatggatgctcccacggacactcggaaagccggtgggcaggagcggaatggcaca
cagtccagcattgtggtggacatgcgtgagtttcggagcgagctcccatctctgatccat
cggaggggtatagacatagagccagtgactctggaggtgggtgattacatcctgacacct
gagctgtgtgtggagcgcaaaagtgtgagtgacctcattggctcactgcacagtggccgc
ctgtacagccagtgcctagccatgtcacgctactaccggagacctgtgctgctcattgag
tttgacccaagcaagcccttctccctggcaccacgaggtgccttcttccaggagatgagc
agcagcgacgtgagctccaagctcacactcctcaccttgcacttcccacgcttgcggctg
ctctggtgcccctcaccccatgccacagcagagctgtttgaggagctgaagcagaacaag
ccacagcctgatgcggccacagccatggccatcaccgcagactcagaaacgctgcctgag
tcagatagatataaccctggcccccaagactttgtgctaaagatgcctggggtcaacgcc
aagaactgtcgctccctgatgaatcaagtgaagaacatcgcagaactggctaccctatcc
ctggagcgactcacaagcatcctggggcactcgggaaatgccaagcagctgcacgacttc
ctgcacactgcctatgcagacttggtgtccaaaggcagagtaagaaagtaa
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