Mastomys coucha (southern multimammate mouse): 116085411
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Entry
116085411 CDS
T07224
Symbol
Acin1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03013
Nucleocytoplasmic transport
mcoc03015
mRNA surveillance pathway
mcoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116085411 (Acin1)
09122 Translation
03013 Nucleocytoplasmic transport
116085411 (Acin1)
03015 mRNA surveillance pathway
116085411 (Acin1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116085411 (Acin1)
03041 Spliceosome [BR:
mcoc03041
]
116085411 (Acin1)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116085411 (Acin1)
Spliceosome [BR:
mcoc03041
]
Complex C
Other components
EJC/TREX
116085411 (Acin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
116085411
NCBI-ProteinID:
XP_031218894
LinkDB
All DBs
Position
Unknown
AA seq
1338 aa
AA seq
DB search
MWRRKLPNSFGGTRGILSGNRGVDYGSRRGQFGPFEGRWRKLPKMPEAVGTDPSTSRKMA
ELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKGALMLENLQKHSTPHAA
FQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEEASAESEDEMTHPEGVA
SLLPPDFQSSLDRPELELSTHSPRKSSSFSEEKGESDDEKPRKGERRSSRVRQARAKHPE
YSQAAEEEEDQETPSRNLRVRADRNLKIEEEEEEEEEDDDDDDEEEEVDEGQKSREAEAP
ILKQIEDEEGEEMTRAKPEKVVDEKPPIIRSQEKDELEKGGRVTRSQEEARRSHLARQQP
EKETQVVSFPQEENEVKSSQGLEEKSQPPSPPPLPEDLEKAPVVLQPEQIVSEEEAPPPL
LTKEASSPPTHIQLQEEIEPVEGPAPPVLIQLSPPNTDPGTRKPGASPHAVQLVRSLSPL
SSTTGTKAEPPAERVSDESALPPAQKSTLLEYSAQTGVETESGESAPLLPLTVEELAPTK
GITEEPMKKQSMEQKEGRRASHTLFSDHNLKQSADSSSSRSSSPSSSSSRSRSRSPDSSA
SHPQSSPRSKQREVSQARVHANPHDRPKMGSRSASESRSRSRSRSRSASSSSRKSLSPGV
SRDSNTSYTETKDPSCGQEAAAPSGPQLQVLEPKEKAPESSASVRRRHLSQPEPEQKHVI
QRLQPEQGSPKKCEAEEAEPPAATQPQTSETQISHLPGSERTHHTVDEREEVTMDTSENR
PENEVPEPPLPVADQVSNDDRPEGSAEEEEKKESSMPKSFKRKISVVSATKGVQAGNSDT
EGGQPGRKRRWGASTATTQKKPSISITTESLKSLIPDIKPLAGQEAVVDLHADDSRISED
ETERNGDDGTHDKGLKICRTVTQVVPAEGQENGQREEEEEKEPEAEPPVPPQVSVEVALP
PPVEHEVKKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGKISNIVHISNLVR
PFTLGQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTALHGVKWPQSNPKF
LCADYAEQDELDYHRGLLVDRPSEAKTEEQGAPRPLHPPPPPPVQPPPHPRAEQREQERA
VREQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEKKEK
AQEEPPAKLLDDLFRKTKAAPCIYWLPLTESQIVQKEAEQAERAKEREKRRKEREEEEQK
EREKEAERERNRQLEREKRREHSRERERDRERERDRGDRDRDRERDRDRGRERDRRDTKR
HSRSRSRSTPVRDRGGRR
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgtggagacggaaactaccgaacagtttcggaggaacccggggaattctgagcggtaat
agaggggtagactatggcagtaggcggggccaattcggtccgttcgaagggcgttggcgg
aaattaccgaagatgcccgaagccgtcgggacggacccgagtacctcacgcaagatggcg
gagctggaggaggtgactctggacgggaagcctcttcaggctctgcgggtgaccgacctg
aaggccgcactggagcagcgaggcctagccaagagcgggcagaagagtgccctggtcaag
cggcttaaaggggctctaatgctagaaaatttacaaaaacactcaacaccccatgctgca
ttccagccaaattcacagattggggaggaaatgagccagaacagtttcataaagcagtat
ctggaaaagcagcaggagcttcttaggcagcgcctggaacgggaagcccgggaggctgca
gagcttgaagaagcttcagctgagtcggaggacgagatgacccatcctgagggagtggct
tccctgctgcctcctgactttcagagcagcctggacagaccagagctggagctcagcaca
cattcaccccgaaagagctcctccttttctgaagaaaaaggtgaatctgatgatgagaaa
ccaaggaaaggagaaagacgatcatccagggttagacaggcaagagctaaacatcctgag
tacagtcaagctgctgaggaggaagaggatcaagagacaccatctagaaacctgagggtc
agagcagatcgaaatttaaaaatagaggaggaggaggaagaagaggaagaagatgatgat
gatgatgacgaggaagaggaggtagatgagggacagaaatctagagaggctgaggcacca
atcctgaaacagattgaggatgaagagggggaagagatgaccagagcaaaaccagaaaag
gtagtggatgagaaacccccaatcataagatcccaggaaaaggatgagttagagaaagga
gggagagttacaagatcccaggaagaagctagaagaagtcatctggccagacagcaacca
gagaaagagacacaagttgtttctttcccacaagaagaaaatgaggtaaaatcttcacaa
ggtttggaggaaaaatcccagcctccttccccgcctccgcttcctgaagacctagagaag
gcccctgttgtgctgcagccagaacaaatagtcagtgaagaggaagcacccccaccttta
cttaccaaggaagcgtcatctccaccaactcatatacaactccaggaagagatagagcca
gtggaaggcccagcaccccctgtcctcattcagttatctcctcctaatacagatcctgga
accaggaagccaggagcatctcctcatgccgtgcagctggtaagaagcctgtctcctctg
tcaagtactacaggtaccaaagcagagcctccagcagagcgagtgtcagatgagagtgcc
ctgcctccagctcagaaaagcacactgctggaatactctgcccagacaggtgttgaaacc
gagagtggagagtctgctcccctcctccctctaacagtagaggagttagcacccaccaaa
gggatcactgaggaacctatgaagaaacaatctatggaacagaaggagggcagaagagct
tcccacactctcttctccgaccacaatttgaaacagtcagctgactcatcctccagccga
tcatcctcgccttcatcctccagctctagatccagatcgagatctcctgacagttcagct
tcccacccacagtcatctccaagatctaaacagagagaggtatcccaagcacgagttcat
gccaaccctcatgatagacccaagatgggatccaggtcagcatcagagtccaggtcacgt
tcccgatctcgttcccgttccgcatcaagcagcagcagaaaatctctgagccctggagtc
tccagagacagcaacaccagctacactgaaaccaaagatccctcttgtggtcaggaggct
gcagctccatctgggccacagctgcaggtccttgaaccaaaggagaaggctcccgagtcc
tcagcctctgtccggaggaggcatctgagccagcctgagccagagcaaaagcatgtgatc
cagaggttacagccagagcaggggagcccaaagaagtgtgaagctgaagaggcagagcca
ccagctgccacacagcctcaaacctcagagactcagatctctcatctaccaggatcagaa
aggactcatcacactgttgacgagagggaggaagtgactatggacaccagtgaaaacaga
cctgaaaatgaggtgccagagcctcctctgcctgttgcagaccaagtcagcaatgacgac
cggccagagggcagtgctgaagaagaggagaagaaagagagttcgatgcccaaatcattc
aagaggaaaatctccgttgtctcagctaccaagggggtgcaagctggaaacagtgacaca
gaggggggccagcctggtcgaaaacgtcgttggggagccagcactgctacgacacagaag
aaaccgtctatcagtatcaccactgagtcacttaagagcctcatccccgacatcaaaccc
ctggcggggcaggaggctgttgtggatcttcatgctgatgactcccgaatctctgaggat
gaaacagagcggaatggcgacgatggaacccatgacaaaggactgaaaatatgccggaca
gtcactcaggtagtacctgcagagggccaggagaacgggcagcgggaagaggaagaagag
aaagagcctgaggcagagccgcctgtgcctccccaggtgtcggtggaggttgccttgccc
ccacccgtggaacatgaagtaaagaaagtaacattaggagataccttaacccggaggtcc
attagccagcagaagtctggagtttccattacaattgatgaccccgtccgaacagcccag
gtgccctccccacccaggggcaagatcagtaacattgtccacatctccaacttggttcgt
cccttcactttaggccagctgaaggagttattggggcgtacaggaactttggtggaagag
gctttttggattgacaagatcaaatctcattgctttgtgacgtattctacagtagaggaa
gccgttgccacccggacagctctgcatggggtcaaatggccccagtccaaccccaaattc
ctttgtgctgactatgctgagcaagatgagctggactatcaccggggactcttggtagat
cggccatctgaagctaagacagaggaacagggagcaccaaggcctctgcatcccccgccc
ccgcccccagtccagccaccaccccacccccgggctgagcagcgggagcaggaaagggct
gtgcgagagcaatgggcagaacgggaacgggaaatggagcgacgggagaggactcggtct
gagcgagaatgggatcgggacaaggttcgagaaggaccccgctcccgatcaaggtcccgt
gaccgccgccgcaaagagcgagcaaaatctaaagaaaagaagagtgagaagaaagaaaaa
gctcaggaggagccacctgccaagttgctggatgacctcttccgtaagactaaggcagct
ccctgcatctattggctcccactgactgagagccaaattgttcagaaggaggcagagcaa
gctgaacgggccaaggagcgggagaagcggcgaaaggaacgagaagaagaagaacaaaaa
gaacgggagaaggaagctgaacgggaacggaaccgacagctagaacgggagaagcggagg
gagcacagcagggagagagagagggacagggagagagagagggacaggggcgaccgagat
cgagatagggaaagagaccgagaccgaggcagggagagggatcgcagagacaccaagcgc
cacagcagaagccggagtcgaagcacacctgtacgggaccggggtgggcgccgctag
DBGET
integrated database retrieval system
