Mastomys coucha (southern multimammate mouse): 116085664
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Entry
116085664 CDS
T07224
Symbol
Smpd4
Name
(RefSeq) sphingomyelin phosphodiesterase 4 isoform X1
KO
K12353
sphingomyelin phosphodiesterase 4 [EC:
3.1.4.12
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc00600
Sphingolipid metabolism
mcoc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
116085664 (Smpd4)
Enzymes [BR:
mcoc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
116085664 (Smpd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
mit_SMPDase
Motif
Other DBs
NCBI-GeneID:
116085664
NCBI-ProteinID:
XP_031219149
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MASRRLPARSFQTVRWFPKAAISCLPWESAMAFPHLQQPNFLLASLKADSVNKPFAQRCQ
DLVKVIEDFPAKELRAIFPRLVESIFGSLDGVLVGWNLRCLQRRVNPVEYSIVMDFLDPS
GPMMKLVYKLQAEEYTFDFPVSYLPGPVKASIQENVLPDSPLYHNKVQFPPTGGLGLNLA
LNPFEYYMFYFALSLISQKSRPMAHHVRTSDCAYFILVDRYLTWFLPTEGSVPPPLCSSP
GGSSPSPAPRTPAMPFASYGLHTSLLKRHISHQTSVNADPASHEIWRSETLLQVFVEMWL
HHYSLEMYQKMQSPHAKLEVLHYRLTVSSALHSPAQPSLQALHAYQESFTPTEEHVLVVR
LLLKHLHAFANSLKPDQTSPSAHSHATSPLEEFKRAAVPRFVQQKLYVFLQHCFGHWPLD
ASFRAVLEMWLSYLQPWRYAPEKQAQGSDSQPRCVSEKWAPFIQENLLMYTKLFVSFLNR
ALRTDLVSPKNALMVFRVAKVFAQPNLTEMIQKGEQLFLEPELIIPHRQHRLFTATTSFL
SPWPPVVTDASFKVKSHVYSLEGQDCKYTPMFGPEVRTLVLRLAQLITQAKQTAKSISDQ
YVESPTGHSFLSWLGFGFIDTNSYPANDLDEMGQESIRKTDEYLEKALEYLRQIFRLSEA
QLAQLTLALGSARDENGKQQLPDCIVGEEGLILTPLGRYQIINGLRRFEIEYQGDLELQP
IRSYEITSLVRALFRLSSAINRRFAGQMAALCSRNDFLGSFCRYHLTEPALNRHLLSPVG
RRQVTNPARGPRLSLRFLGSYRTLLLLLMAFFVASLFCIGPLPCSLLLVLGYVLYAVAMT
LLTERGKLHQL
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccgccgccttcctgcgagatccttccagacagtccggtggttccctaaggca
gccatttcttgcttgccctgggagtctgctatggcattccctcacctccaacagcctaat
ttcctcctggctagcctgaaggctgactctgtaaataagccctttgcacagcgttgccaa
gatttggtgaaagtcattgaggattttccagctaaggaattgcgtgccatcttccctcgg
ctggtggaaagcatctttggcagcctggatggtgtccttgttggttggaatctccgatgc
ctacagaggcgtgtgaaccctgtggagtacagcatagtaatggactttctagacccaagt
ggcccaatgatgaagttggtttataagcttcaagctgaagagtatacctttgattttcct
gtctcctatcttcctggccccgtgaaggcatccattcaagagaatgtcctcccagacagt
cctctgtaccacaacaaggtccagtttcccccgactggaggccttggcctgaacctggcc
ctcaatccattcgaatactatatgttctactttgcgctgagcctcatctctcaaaagtca
aggcctatggcccaccatgttcgtacttcggactgtgcttatttcatcctggtggatagg
tacctaacgtggttcctccccactgaaggcagcgttcctccaccactctgctccagtcct
ggaggctccagcccctcaccagctcccagaacacctgccatgccctttgcctcctatggc
ctccacactagtctcttgaagcgacacatctctcatcagacatctgtgaatgcagaccca
gcgtcccatgagatctggcggtcagaaactctcctccaggtttttgtggaaatgtggctt
catcattactccctagagatgtaccaaaaaatgcagtcccctcatgccaagttggaggtt
ctacactaccgactcactgtctccagcgccctccacagccctgcccaacccagcctccag
gccctccacgcctaccaagagtccttcacgcctactgaagagcatgtgctggtggtgcgc
ctgctgctgaagcacctgcatgcctttgccaacagcctgaagccagatcagacttcgcca
tcggcacactcccatgccaccagtcccctggaggagttcaaacgggctgctgtgcctcgc
tttgtccagcagaagctgtatgtcttcctgcagcactgttttggccactggcctctagat
gcatccttcagagctgtcttggagatgtggctgagctacttgcagccatggaggtatgcc
ccagagaaacaagctcagggcagcgattcccagccacggtgtgtgtcggagaagtgggca
cccttcatccaggaaaacctgctgatgtacaccaagctgtttgtgagcttcctgaaccgt
gctctacgcacagaccttgtcagccccaagaatgcactcatggtcttccgagtggctaag
gtctttgcccagcccaacctgactgagatgatccagaaaggtgagcagctgttcctagag
ccagagctcatcattccccaccgccaacatcggctcttcacagctaccaccagcttcctg
tcaccgtggccccctgttgtgacagatgcctcattcaaggtgaagagccatgtctacagc
ctggagggccaagactgcaaatataccccaatgtttggtcctgaagtccgaaccttggtc
ttgcgccttgctcagctcatcacacaggccaagcagactgctaagtccatctctgatcag
tatgtggagagcccaactggccactctttcctgtcatggcttggctttggcttcatagac
acaaatagctacccagccaatgacctggatgaaatgggtcaggaaagcatccgcaagaca
gacgagtacctagagaaggccctggagtacctgcgccagatattccggctcagtgaagcc
cagctagcccagctcacgcttgccctggggagtgcgagagatgagaatgggaagcagcag
ctcccggattgcattgtgggggaagaaggactcatccttacaccgttaggccgctaccag
atcattaatggtctgcgaaggtttgagattgagtaccagggagacttagagctgcagcct
atccggagctacgaaatcaccagtctggtccgtgcacttttccggctgtcctctgccatc
aaccgcagatttgcaggccagatggcagctctgtgctcccggaatgacttccttggcagc
ttctgtcgctaccacctcactgagcctgccttgaacagacacctactgagccctgtaggg
cggaggcaggtcaccaatcctgcccggggccccaggctcagcctccgtttcctgggcagt
taccggacactgctcctgctcctgatggccttctttgtggcttctttgttctgcattggg
cccctgccctgctccttgctcctggtcctaggatacgtcctctatgccgtagctatgact
ctgctcactgagcgggggaagctgcaccagctctga
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