Mastomys coucha (southern multimammate mouse): 116085738
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Entry
116085738 CDS
T07224
Symbol
Vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116085738 (Vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116085738 (Vps8)
Membrane trafficking [BR:
mcoc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
116085738 (Vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_VPS8_2
TPR_Vps41
WD40_CDC20-Fz
zf-RING_Vps41
zf-RING_11
zf_RING_Vps8_fungal
Clathrin
zf-C3H2C3
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4
EIF3I
Beta-prop_HPS5
PHD
Motif
Other DBs
NCBI-GeneID:
116085738
NCBI-ProteinID:
XP_031219351
LinkDB
All DBs
Position
Unknown
AA seq
1429 aa
AA seq
DB search
MENEPDPENLEQNPCARTVEEELNKAFNLEASLSKFSCIDLDKELEFKNDLIDDKEFDIP
QVDTPPTLESILNETDDEDESFVLEDPTLLNVDTIDSHSYDTSSVASSDSGDRANLKRKK
KLPDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFGK
DQNQALRLCLGSTSVGGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDA
HPPGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEP
LHSKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVA
VNNCVNPMLAFCRGDMVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTVVLLDS
VEKLHVIDRQTQEELETMEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSY
GGQIFYLGTKSVYVMMLRSWRERMDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDVSK
RKAVVADRMVEILFHYADRALKKCPDQGKIQVMEQHFQDTVPVIVDYCLLLQRKDLLFSQ
MYDKLSENSVAKGVFLECLEPYILSDKLVGITPQVMKDLIVHFQDKKLMENVEALIVHMD
ITSLDIQQVVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFKVIAPPLNAGKTLTDEQVV
MGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSVEASSEEEVYPYVRTL
LHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLAR
QLAKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMA
EKAAFYQICEFMYEREHQYDKIIDCYLHDPLREEEVFNYIHNILSIPGHSAEEKQSVWQR
AMDHMEELVSLKPCKAAELVATHFSGQIEVVVGQLQNQLLLFKFLRSLLDPREGVHVNQE
LLQIPPRITEQFIELLCQFSPDQVIETLQVLECYRLEETIQITQKYQLHEVTAYLLEKKG
DVHGAFLLLLQRLQSRLQEMTRQGENTKEDILLKGVEDTMVETIALCQRNSQNLNQQQRE
ALWFPLLEAMMAPQKLSSSAAAPHLHCEALKSLTMQVLNSMAAFIALPSILQRILQDPIY
GKGKLGEIQGLILGMLDTFNYEQTLLETTASLLNQDLHWSLCNLRASISRGLNPKQDYCS
ICLQQYKRRQEMDDEIIVFSCGHLYHSFCLQSKECTLEIEGQTRWACYKCSSSNKAGKLS
ENPSENKKGRITSSQVKMSPSYHQSKGDPPARKANSEPVLDPQQMQAFDQLCRLYRGSSR
LALLMELSQNRGGDSYRPFAGPQSGPAFNSVFQNENFQLQLAPPPVAED
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgaaccagacccggagaatttggaacagaacccgtgtgccagaactgtggaa
gaagagttgaacaaggcttttaatttagaagcttccctttcaaaattctcttgcatagat
ctggataaggagctggagttcaaaaacgatctgatcgatgacaaggagtttgatattcct
caggtggatacccctccaactttggaaagcatacttaatgagactgacgatgaagatgag
tctttcgttctggaggaccctacactgttaaatgttgacaccattgactctcattcttat
gatacctcatctgtggcgagctcagacagcggcgacagggccaacctaaagaggaagaag
aagttacccgactctttctctctgcatggatcggttatgcgacattcacttctaaagggg
atatctgcacagatcgtgtccgcagccgacaaagtagatgctggcttgcctacagcaatt
gcagtgtccagtctgatagcagtgggaacgtctcacggattggctttaatatttggaaaa
gatcagaatcaagcactgcggctctgcctaggtagcaccagtgttggagggcagtatgga
gccatctctgctctcagcatcaacaacgactgctcaagacttctttgtggctttgctaaa
ggacagatcaccatgtgggatttggccagtggaaaacttctcagatcaataacagatgct
catcctccagggacggcgatcttgcacatcaagttcacagatgatccaactcttgcgatt
tgcaacgacagcggaggctctgtttttgaactaacatttaagagagtgatgggcgtgcga
acctgtgagtctcggtgcctgttcagcggctccaagggtgaggtctgttgtatcgagccc
ctgcactccaagcccgagctgaaagaccatcccatcacacagttctcactgctggccatg
gcgtccttaacaaagatattggtcattgggttgaaaccatctctgaaggtgtggatgact
ttcccctatggacggatggatccttccagcgttccgttgctggcctggcacttcgtggca
gtgaataactgcgtgaatcccatgcttgccttctgtagaggcgatatggttcactttctc
ctggttaagagagatgagtcaggtgcaatacacgtcaccaagcaaaagcaccttcacctg
tactatgatctgatcaacttcacttggatcaactcgcgcacagtcgtgcttttagacagc
gtggagaagctgcatgtgattgaccggcagacgcaggaggaactggagacgatggagatc
tcagaagtccagctggtctacaacagcagccacttcaagtcactggccacagggggaaat
gtcagccaggccttggctttggttggagagaaggcttgctatcaatccatcagtagctat
ggaggacagatcttctatctggggacaaagtctgtgtacgtgatgatgctgaggagctgg
agggagaggatggaccatctcctgaaacaggattgcctcacggaagccttggccctcgca
tggtcttttcatgaaggaaaggcaaaagcagtagtggggctatcgggggacgtcagcaag
aggaaggctgttgttgcagatcggatggtagagatcctattccattatgcagatcgggct
ctgaaaaagtgcccggaccagggaaaaatccaagtgatggagcaacactttcaggatacg
gtgccagtcatagtggactactgccttctgctccagcgaaaggatcttctgtttagccaa
atgtatgacaaattaagtgaaaattccgtggcaaagggcgtgtttttggagtgccttgag
ccatatatcttaagtgataaactggtggggattacacctcaggtcatgaaagacttgatt
gttcatttccaagataaaaaactaatggagaatgtggaagccctcattgtccacatggac
atcaccagcctggacattcagcaggtggttctcatgtgttgggaaaatcgtctgtatgat
gccatgatctatgtctacaacagaggcatgaatgagtttattagtccaatggagaagctt
ttcaaagtcatcgccccacctctgaatgcagggaagactctcacagatgagcaagttgtt
atgggcaacaagcttctggtgtacatcagctgttgcctggcaggtcgtgcctaccctctt
ggtgacattcctgaagatcttgttcccttggttaaaaaccaggtttttgagtttctgatt
cgcctgcattctgtagaagcatcctctgaggaagaagtctatccttatgttcggactttg
ctacattttgacacaagagaatttctgaatgtgttggcactgacctttgaagactttaaa
aatgataagcaagctgtggagtaccagcaacgcattgtggatattttattgaaagttatg
gtggagaattcagattttaccccatcacaagtggggtgtctctttacattcctcgctcgg
cagctcgcaaaacctgacaataccttgtttgtaaacagaaccctctttgatcaagtcctt
gagttcctctgtagccctgatgatgactcccgccactccgaaagacagcaggtcctttta
gaattgctgcaggccggaggcatagttcaatttgaagagagtcggctcatccgcatggca
gagaaggcagcattctatcaaatctgtgaatttatgtatgagcgagaacaccagtatgac
aagatcattgactgctacctgcacgacccattgagagaggaagaagtcttcaattacatc
cacaacatcttatctattcctggtcacagtgctgaggagaagcagtcggtgtggcagaga
gcaatggatcatatggaggaacttgtgtccctgaagccctgtaaagccgcagagctggtt
gctactcacttttctggacagattgaagtagtcgttggacagcttcagaaccagcttttg
cttttcaaatttttgaggagtcttctagatccaagggaaggtgttcacgtcaatcaggaa
ttgctgcagatcccgcctcgcattacagagcagttcattgagctgctgtgccagttcagt
cctgaccaagtcatagagacactgcaagtacttgagtgctaccgtctggaggaaactatc
cagattacacaaaagtatcagctccacgaagtcactgcgtatctgttggagaagaaaggg
gatgttcacggggccttcctgctgctgctgcagagattgcagagcaggctgcaggagatg
acacggcagggtgaaaataccaaggaggacatcctgctgaaaggtgttgaagataccatg
gtagagacaatagctctttgccagagaaattcacagaatttgaatcagcagcaacgagag
gcactatggtttccattgttggaagcaatgatggcaccacagaagctgtccagctcagct
gctgctcctcatctgcactgtgaagctctgaagtctttgaccatgcaggtcctaaacagc
atggcagcgttcatcgccctcccgtccatcctacagagaatcttgcaggacccaatttat
ggaaaaggaaaacttggagaaatccagggccttattctggggatgctggacacctttaac
tatgagcaaaccttgctagaaacaacagccagcctcctgaaccaggatctccattggtca
ctgtgtaacctgagagcatcaatatccagaggactcaatcccaaacaggattactgttct
atatgtttacagcagtacaaaagacgccaagaaatggatgatgaaattattgtctttagc
tgtggccatctgtatcattcattctgtctccaaagtaaagaatgcaccctagaaattgag
gggcagacaagatgggcatgttacaaatgcagctccagtaataaagcaggcaaactcagt
gaaaatccttctgaaaacaagaaggggcggataacctcatctcaggtaaaaatgtctccc
tcgtatcatcagtccaagggggatcctcctgccaggaaggcaaactcagaacctgttctg
gacccacagcaaatgcaagcctttgatcagctctgccggctctaccgaggaagttctagg
ctggctctccttatggagctctcccagaaccgaggcggcgacagctataggccgtttgcc
ggcccccagagcgggcctgctttcaacagcgtcttccagaacgagaatttccagcttcag
cttgcgcctccgcctgtggctgaagactga
DBGET
integrated database retrieval system
