KEGG   Mastomys coucha (southern multimammate mouse): 116085844
Entry
116085844         CDS       T07224                                 
Symbol
Itgb5
Name
(RefSeq) integrin beta-5 isoform X1
  KO
K06588  integrin beta 5
Organism
mcoc  Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04145  Phagosome
mcoc04148  Efferocytosis
mcoc04151  PI3K-Akt signaling pathway
mcoc04510  Focal adhesion
mcoc04512  ECM-receptor interaction
mcoc04810  Regulation of actin cytoskeleton
mcoc04820  Cytoskeleton in muscle cells
mcoc05165  Human papillomavirus infection
mcoc05205  Proteoglycans in cancer
mcoc05410  Hypertrophic cardiomyopathy
mcoc05412  Arrhythmogenic right ventricular cardiomyopathy
mcoc05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:mcoc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    116085844 (Itgb5)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    116085844 (Itgb5)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    116085844 (Itgb5)
   04148 Efferocytosis
    116085844 (Itgb5)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    116085844 (Itgb5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    116085844 (Itgb5)
   04810 Regulation of actin cytoskeleton
    116085844 (Itgb5)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    116085844 (Itgb5)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    116085844 (Itgb5)
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    116085844 (Itgb5)
   05412 Arrhythmogenic right ventricular cardiomyopathy
    116085844 (Itgb5)
   05414 Dilated cardiomyopathy
    116085844 (Itgb5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mcoc04131]
    116085844 (Itgb5)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:mcoc04515]
    116085844 (Itgb5)
Membrane trafficking [BR:mcoc04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    116085844 (Itgb5)
Cell adhesion molecules [BR:mcoc04515]
 Integrins
  Integrin beta subunits
   116085844 (Itgb5)
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail EGF_integrin Integrin_b_cyt PSI_integrin EGF_2 I-EGF_1 EGF_Teneurin vWA_SIBA-E EGF_TEN SCO4226-like
Other DBs
NCBI-GeneID: 116085844
NCBI-ProteinID: XP_031219587
LinkDB
Position
Unknown
AA seq 799 aa
MPRVPATLYACLLGLCALVPRLAGLNICTSGSATSCEECLLIHPKCAWCSKEYFGNPRSI
TSRCDLKANLIQNGCEGEIESPASSTHILRNLPLSSKGSSAMGSDVIQMTPQEIAVSLRP
GDQTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFG
SFVDKDISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVS
RNRDAPEGGFDAILQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQC
HLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEIL
HGDSKNIIQLIINAYSSIRAKVELSVWDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIGD
TASFEVSVDARSCPGRHMVQSFTLRPVGFRDSLQVEVSYNCTCGCSTGLEPNSARCSGNG
TYICGLCECDPSYLGTRCECQEGENQSGYQNLCREAEGKPLCSGRGECSCNQCSCFESEF
GRIYGPFCECDSFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDVSTCRAKDGQ
ICSDRGRCVCGQCQCTEPGAFGETCEKCPTCPDACSSKRDCVECLLLHQGKPDNQTCHHQ
CKDEVITWVDTIVKDDQEAVLCFYKTAKDCVMMFSYTELPNGRSNLTVLREPECGSAPNA
MTILLAVVGSILLIGMALLAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPIST
HSVDFAFNKFNKSYNGSVD
NT seq 2400 nt   +upstreamnt  +downstreamnt
atgccgcgggtgcccgcgaccctctacgcctgtctgctcgggctctgcgcgctcgtgccg
cgcctcgcaggactcaacatatgcaccagtggaagtgccacttcgtgtgaggaatgccta
ttgatccacccaaagtgtgcttggtgctccaaagagtactttggcaacccacggtccatc
acctctcggtgtgacctgaaggcaaacctcatccagaatggctgtgaaggtgaaattgag
agtccagccagcagcacccacatccttcggaacctacctctcagcagcaagggttccagt
gccatgggctctgatgtcatccagatgacgccacaggagattgcagtgagcctccggcca
ggtgaccagactaccttccagctgcaggtacgccaagtggaggactatcctgtagacctg
tactacctgatggacctctccctctccatgaaggatgacttggacaacatccgaagcctg
ggcaccaagctggcggaggaaatgaggaagctcactagcaacttccggttaggtttcggg
tcttttgttgacaaggacatctctcctttctcctacacagcaccgagataccagaccaat
ccgtgtattggttacaagttattccccaactgcgtcccctccttcgggtttcgccatctg
ctgcctctcacagacagagtggacagttttaacgaggaagtgaggaagcagagggtatcc
cgaaaccgagatgcccccgaggggggctttgatgcgatcctccaggcggctgtctgcaag
gagaagatcggatggcgaaaagacgcactgcacttgctggtgttcacaacggacgatgtg
ccccacatcgcactggacggaaaactgggtggcctggtccagccccacgatggccagtgt
cacctgaacgaagccaacgagtacactgcgtccaaccagatggactatccatcgcttgcc
ctgcttggggagaagctggcggagaacaatattaacctcatctttgcagtgacaaagaac
cactatatgctatacaagaattttacagccctgatacctggaaccactgtggagattttg
catggagattccaaaaatattattcagctgattatcaatgcatacagtagcatccgtgct
aaggtggagctgtcggtgtgggatcagccagaagaccttaatctcttcttcactgccacc
tgccaagatggcgtatcctaccctggtcagaggaagtgtgagggtctgaagatcggggac
acggcatcctttgaagtgtctgtggatgctcggagctgccctggcagacatatggtacag
tctttcactttgaggcccgtgggcttccgggacagtctgcaggtggaagtctcctacaac
tgcacatgtggctgcagcaccgggctggagcccaacagcgccagatgcagtgggaatgga
acatacatctgtgggctgtgcgagtgtgaccccagttacctgggcactaggtgcgagtgc
caggagggggagaaccagagcgggtaccagaacctgtgccgggaggcggaaggcaagccg
ctgtgcagcggacgtggggagtgtagctgcaaccagtgctcctgcttcgagagtgagttc
gggaggatctacgggcccttctgcgagtgtgacagcttttcctgtgccaggaacaagggc
gtcctatgctcaggccacggggagtgtcactgcggagaatgcaaatgccatgcaggttac
attggagacaattgtaactgctcaacagacgtcagcacatgcagggccaaggatgggcag
atctgcagtgatcgaggccgttgtgtctgtgggcagtgccaatgcacagagcctggagcc
tttggggagacgtgtgagaagtgcccaacctgcccagacgcttgcagctctaaaagagac
tgtgtagaatgcttgctgcttcaccaggggaaacctgacaaccagacctgccaccaccag
tgcaaagatgaggtgatcacatgggtagacaccatcgtcaaagatgaccaggaggctgtg
ctctgcttctacaaaactgctaaggactgcgttatgatgttcagctacacagaactgccc
aatgggaggtccaacctgacggtcctcagggagccagagtgtggaagtgcccccaatgcc
atgaccatcctgctggctgtggttggcagcatccttctgattgggatggcactcctggcc
atctggaagctgctcgtcaccatccatgaccgccgagagtttgccaagttccaaagtgag
cgctccagggcccgttatgaaatggcctcaaaccccctgtacagaaagcccatctccacg
cacagtgtagatttcgccttcaacaagttcaacaaatcctacaatggctcagtggactga

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