Mastomys coucha (southern multimammate mouse): 116085860
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Entry
116085860 CDS
T07224
Symbol
Sema5b
Name
(RefSeq) semaphorin-5B isoform X1
KO
K06841
semaphorin 5
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
116085860 (Sema5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
TSP_1
TSP1_2
TSP1_spondin
PSI
TSP1_ADAMTS
TSP1_CFP_C
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
116085860
NCBI-ProteinID:
XP_031219637
LinkDB
All DBs
Position
Unknown
AA seq
1093 aa
AA seq
DB search
MVVPGPLALSLLLPSLTLLVSHLSSSQDLASESSSEQQLCTRREHPIVAFEDLKPWVSNF
TYPGVRDFSQLALDPLRNQLIVGARDYLFRLSLANVSLLQATEWASSEDTRRSCQSKGKT
EEECQNYVRVLIVSGRKVFMCGTNAFSPVCSSRQVGNLSRTIEKINGVARCPYDPRHNST
AVISSQGELYAATVIDFSGRDPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAFDIGLFAY
FFLRENAVEHDCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNE
LQSAFHLPEQDLIYGVFTTNVNSIAASAVCAFNLSAISKAFNGPFRYQENPRAAWLPIAN
PIPNFQCGTLSETGPNENLTERSLQDAQRLFLMSEAVQPVTPEPCVTQDSVRFSHLVVDL
VQAKDTLYHVLYIGTESGTILKALSTASRSLRGCYLEELHVLPPGRLEPLRSLRILHSAR
ALFVGLSDRVLRVPLERCSAYRSQGACLGARDPYCGWDGKRQLCSTLEDSSNMSLWIQNI
TACPVRNVTRDGGFGPWSPWKPCEHLDGDNSGSCLCRARSCDSPRPRCGGLECLGPAIHI
ANCSRNGAWTAWSSWAQCSTSCGIGFQVRQRSCSNPAPRHGGRICVGKSREERFCNENTP
CPVPIFWASWGSWSKCSNNCGGGVQSRRRSCENGNSCPGCGVEFKTCNPEACPEVRRNTP
WTPWLPVNVTQGGARQEQRFRFTCRAPLPDPHGLQFGKRRMETRTCPADGTGTCDTDALV
EDLLRSGSTSPHTLSGGWSAWGPWSSCSRDCELGFRVRKRTCTNPEPRNGGLPCVGDAAE
YQDCNPQACPVRGAWSCWTAWSQCSASCGGGHYQRTRSCTSPAPSPGEDICLGLHTEEAL
CATQACPEGWSLWSEWGACSEDGAQSRSRNCEELVPGPGACVGNSSQSRPCPYSEIPVIL
PASSVEESTSCGGFSLIHLIVTGVSCFLGSGLLTLAVYLSCQHCQRQSQESTLVHPATPN
HLHYKGGGTPKNEKYTPMEFKTLNKNNLIPDDRANFYPLQQTNVYTTTYYPSPLNKPSFR
PDASAGQRCFPNS
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggtagtcccaggacccctggctctctcgctgttgctgcccagcctcaccctactggta
tcccacctctccagctcccaggacctcgccagtgagtccagcagtgagcagcagctgtgc
acccggagggagcaccccatcgtggcctttgaagatctgaagccatgggtctctaacttc
acctaccctggagtccgggatttctcccagcttgctcttgatcccttgaggaatcagctc
atcgtgggagccagggactacctcttcaggctcagccttgccaatgtttccctccttcag
gctacagagtgggcctccagtgaggatacgcgccgctcctgccagagcaaagggaaaacc
gaggaggagtgtcagaactatgtacgagtcctgattgtttccggccggaaagtgttcatg
tgtggtaccaatgccttttccccagtgtgctccagcagacaggtggggaacctcagtcgg
actattgagaagattaatggtgtagcccgctgcccctatgacccacgccacaactctaca
gccgtcatctcctctcagggagagctttatgcagccactgttattgacttctccggtcgg
gacccagccatctaccgcagcctgggcagtggcccaccacttcgcactgcccaatataat
tccaaatggctcaatgagccaaattttgtggcagcctttgacatcgggctgtttgcctat
ttcttccttcgggagaatgcggtggaacatgattgtgggcgcactgtgtactctcgggtg
gcccgggtgtgcaagaatgatgtaggcggccgtttcctgctggaggacacatggaccaca
ttcatgaaggcccggctcaactgctcccgccccggagaggtccccttctactataacgag
ctgcagagtgccttccatctgcccgagcaagacctcatctatggagtcttcaccactaat
gtaaacagcattgcggcttctgctgtctgcgccttcaacctcagtgccatctccaaggct
ttcaacggcccattccgttaccaggaaaaccccagggctgcctggctcccgatcgccaac
cccatccccaatttccagtgtggcaccctgtcggagactggccccaatgagaacctcacc
gagcgcagcctgcaggatgcacagcggctcttcctgatgagcgaagctgtgcagccagtg
acaccagaaccctgtgtcactcaggacagcgtccgcttctcacatctcgtggtagacctt
gtgcaagctaaggatacgctctaccacgtactctacataggcacggagtcaggtaccatc
ctgaaagcgctgtccacggccagtcgcagcttgcgtggctgctacctggaggagctgcac
gtgctgccccccgggcgccttgaacctctgcgaagcctgcgcatcctccacagcgcgcgt
gcgctcttcgtgggattgagcgaccgggtgctgcgggtcccgctggagaggtgctccgcc
taccgtagccagggggcatgcctgggagcacgggacccatactgcggctgggatgggaag
cggcaactttgcagcacgcttgaggacagttccaacatgagcctgtggatccagaacatc
acagcctgtcctgtacgaaatgtgacacgggatgggggctttggcccatggtcaccatgg
aaaccgtgtgagcacttagatggagacaactcgggttcttgcctgtgccgggccagatcc
tgtgactccccaaggcctcgctgtgggggcctcgagtgcctggggccagccatccatatc
gccaattgctccaggaatggggcgtggaccgcatggtcatcgtgggctcagtgcagcacg
tcctgtgggatcggcttccaggtccgtcagcgaagttgcagcaacccggcgcctcgccac
gggggccgcatctgcgtgggcaagagccgggaggagcggttctgtaatgaaaatacacct
tgcccggtacccatcttctgggcttcctggggttcctggagcaagtgcagcaacaactgt
ggaggaggcgtgcagtctcgccgtcgttcttgcgagaatggcaactcgtgcccgggatgc
ggcgtggagttcaagacctgcaaccccgaggcctgcccagaagtgcgtcgcaacacaccc
tggacgccctggctgcccgtgaacgtgacccagggtggcgcgcgccaggagcagcgattc
cgcttcacctgccgcgcaccgctgccagacccgcacggtctgcagttcggtaagaggagg
atggagaccaggacctgccctgcggacggcaccggaacctgcgacaccgacgccctggtg
gaggatctcttgcgcagcgggagcacatcaccacacactctgagcgggggctggtctgcc
tggggtccgtggtcatcctgctcccgggactgcgagctgggcttccgtgtccgcaagaga
acttgtaccaacccggagccccgcaatgggggcttgccctgcgtgggagacgctgcagag
taccaagactgcaacccgcaggcttgcccagtgcggggtgcctggtcctgctggactgca
tggtcccagtgctcagcatcctgcggtggtggccactatcaacgcacccgttcctgcacc
agccccgccccgtccccaggtgaggacatctgcctcggcctgcacacggaggaggcacta
tgtgctacacaggcctgcccagaaggctggtcactgtggtctgagtggggtgcctgctct
gaggatggggcccagagccggagccggaactgtgaggagcttgtcccagggccaggtgcc
tgtgttggcaacagcagccagagccggccctgcccctacagtgagattcctgtcatccta
cctgcttccagtgtggaggagagcaccagctgtggagggttcagtctcatccacctgata
gtcactggtgtgtcctgcttcctgggatctgggctcttgaccttggcagtgtacctgtct
tgccagcactgccagcgccagtctcaggagtccacgcttgtccatcctgccacgcctaac
catttgcactacaagggcgggggcacccccaagaatgagaagtacacccccatggaattc
aagacattgaacaagaacaacttaattcctgatgacagagccaacttctacccactgcag
cagaccaatgtgtatacaaccacctactaccccagcccactgaacaagccgagcttccgg
cctgatgcctcagctggacagcgctgtttccccaacagctga
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