KEGG   Mastomys coucha (southern multimammate mouse): 116085885
Entry
116085885         CDS       T07224                                 
Symbol
Polq
Name
(RefSeq) DNA polymerase theta isoform X1
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
mcoc  Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:mcoc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mcoc03400]
    116085885 (Polq)
Enzymes [BR:mcoc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     116085885 (Polq)
DNA repair and recombination proteins [BR:mcoc03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    116085885 (Polq)
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII DUF4332 HHH_5 Helicase_dom4_arc Qn_am_d_aIV
Other DBs
NCBI-GeneID: 116085885
NCBI-ProteinID: XP_031219685
LinkDB
Position
Unknown
AA seq 2550 aa
MSLPRRSGKRRRSPSSGSDSFSGEGDSSVSPQLRGRPVLSPPPGLGRGRRLTGTGTCKQR
VSDDQIDQLLLANWGLPKAVLEKYHSFGVKKMFEWQAECLLLGQVLEGKNLVYSAPTSAG
KTLVAELLILKRVLETQKKALFILPFVSVAKEKKYYLQSLFQEIGLKVDGYMGSTSPTGQ
FSSLDIAVCTIERANGLINRLVEESKMDLLGMVVVDELHMLGDSHRGYLLELLLTKICYV
TQKSSSCQADVASTLSNAVQIVGMSATLPNLQLVASWLNAELYHTDFRPVPLLESIKIGN
SIYDSSMKLVREFQPLLQVKGDEDHIVSLCYETIRDNHSVLIFCPSKKWCEKVADIIARE
FCNLHHQPEGLVKSSEFSSVILDQKSLLEVKDQLKRSPSGLDSVLKNTVPWGVAFHHAGL
TFEERDIIEGAFRQGFIRVLAATSTLSSGVNLPARRVIIRTPVFSGQPLDILTYKQMVGR
AGRKGVDTMGESILICKNSEKSKGIALLQGSLKPVHSCLQRQGEVTASMIRAILEIIVGG
VASTSQDLQAYAACTFSAAAVKEGEPGRRRSQDDAQLGAVDACVTWLLENEFIQVAEPSD
GTGGKVYHPTHLGSATLSSSLSPTDTLDIFADLQRAMKGFVLENDLHIVYLVTPVFEDWT
SIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKGKVVARTERQHRQMAIHKRFFTS
LVLLDLISEMPLKEINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLGWHNMELLLSQFQ
KRLTFGIQRELCDLIRVSALNAQRARLLYASGFLTVADLARADLAEVEVLLKNALPFKSA
RKAVDEEEEAAEERRSMRTIWVTGKGLSAREAAALIVGEAKMILQQDLIEMGVQWDPHSS
LSSSTHSLTSESEVKEQTLKSQTKSSHKKLASKSRSSTRASGSHDKQSPDAERGIDERRE
HADSLCEFQGNHELQTPSICRARKRTSLGIKKEILQKSLKEGKPSTKGVLQTFSLQKTRK
TALSFSSKQVNNSFPSGRDRKHRKKSWGSSPMRDSGVHRDDIQGQTMCISTLCEDSQNSS
EEQNAEFRSPGLFAKNVSFCAKEKCNKTSFPLQVQGACLREKPESNAAVEHSIVGSQNKN
MTGQSPGAARDRRGLAAHEIGKVNEVLTENGAESQFQDTQPVSQYLENHSEKHTNTCTRQ
KTLIEGQAGSNYVARDSNDAVPIKCERMKLSSKDHDSNPCCQALGSNTGRTEALQSTGKL
GQAGGQCENLLNSPGIQEQTGAYATNKTEHSHVSNPTFCDFGDSLFLDTQSEEIIEQMAT
ENTMQGAKAVGIMEERHSTPGEQHVPGAANTDNGDSKHVESVKANTEKSISRGTPDSLIF
YSPIPQGENGACFKENEHSVTDSQLNSFLQGFETQEMVKPIIMLAPQMRTPTDVEEESLP
ETSLNMSDSILFDSFGEDGLGQGQSPDVKAKQPLLSEMTLNHFSNPPHPQEDPVMTPNMS
EPQGTPQQVASLSGESIIFSEIDSNQVIEALDSMAAFQVQENCSPVTLKTLKPSDSAVLG
NECPQGEVIKGDQNEESPKPKLTETNQDNSFTWSGASFNLSPELQRILDKVSSPLENEKP
NLIHVNLSCFEGNSTESRERQKINSDLGTVQRTSLFPSNGVKSRTQGLETKARHGGASSP
LLRKESAAADDNGLIPPTPVPASASKLAFPEILGTSVKHQKASSVLQLGESCLFGSPSDN
QNQDLSQELRDSLKDYDGSVVDTSFFLQSQDGLPLTQASCSSESLAIIDVASDQILFQTF
VKEWQCQKRFSISLACEKMTSSTSSKTATIGGRLKQASLPQEATVEDDGFPVRDSDGAVV
VGLAVCWGGKDAYYLSLQKEPRQSEMSPSLAPPPLDARLTVKERMECLQSCLQKKSDRER
SVVTYDFIQTYKVLLLSCGISLEPSYEDPKVACWLLDPDSKEPTLHSIVTSFLHHELALL
EGIETGPGIQSLGLNVNTEHSGRYRASVESILIFNSMNQLNSLLQKENLHDIFCKVEMPS
QYCLALLELNGIGFSTVECESQKHIMQVKLDAIETQAYQLAGHSFSFTSADDIAQVLFLE
LKLPPNGEMKTQGSKKTLGSTRRGNESDRRMRLGRRFSTSKDILNKLKDLHPLPGLILEW
RRISNAITKVVFPLQRAKYLNPFLRMERIYPVSQSHTATGRITFTEPNIQNVPRDFEIKM
PTLVRESPPSQAPGKGRFPLAIGQNKKVYGLHPGHGTLKKEKASDRGMPFSVSMRHAFVP
FPGGLILAADYSQLELRILAHLSRDCRLIQVLNTGADVFRSIAAEWKMIEPDAVGEDLRQ
QAKQICYGIIYGMGAKSLGEQMGIKENDAACYIDSFKSRYKGVNHFMRDTVKNCRRNGFV
ETILGRRRYLPGIKDDNPYHKAHAERQAINTTVQGSAADIVKTATVNIQKQLETFHSTFK
SHGHRESMLQNDRTGLLPKRTLRGMFCPVRGGFFILQLHDELLYEVAEEDVVQVAQIVKN
EMECAVKLSVKLKVKVKIGASWGELKDFDV
NT seq 7653 nt   +upstreamnt  +downstreamnt
atgagtcttccgcgccggagtgggaaacggcggcgttccccatcatccggctccgactcg
ttctcgggagaaggtgatagctctgtcagtcctcagctccggggtaggccggtgctgagt
ccacctccggggctgggacgcggccggaggctcacaggaacaggaacatgcaagcaaaga
gtttctgatgaccagatagaccagctgctgttggcaaattggggacttcctaaagcagtt
ctggagaaataccatagctttggtgtaaaaaagatgttcgaatggcaggcagaatgtctt
ttgcttggacaagtcctggaaggaaagaatctagtttattcagctcctacaagtgctggg
aagactctcgttgcagagttacttattttgaagcgggttttggaaacgcagaagaaagcg
ttgtttattctgccttttgtgtctgtggctaaagagaagaaatactacctccagagtctg
tttcaggagataggactaaaagtagatggctacatgggtagcacctcaccaacgggacag
ttctcctccttggacattgctgtttgcactattgagagagccaatgggctgatcaatcgc
ctcgttgaggaaagtaagatggatctgctaggaatggtggttgtggatgagctacacatg
ctgggggactctcaccgagggtatctgctggaacttttgctgaccaagatttgctatgtc
actcagaaatcatcatcatgccaggcagatgtagccagtactctgtctaatgctgtgcag
attgttggcatgagtgctactcttcctaatttgcagcttgtggcttcctggttgaatgct
gaactttaccatactgactttcgccctgtaccacttttggaatcaataaaaataggaaat
tccatatatgattcttcaatgaagcttgtgagagaatttcaacccctgctccaagtgaag
ggagatgaagaccacattgttagtttatgctatgagactattcgggataaccattcagta
ttaatattctgtccatcaaaaaaatggtgtgagaaggtagcagatatcattgcccgagag
ttttgcaacctgcaccatcaacctgaggggttagtaaaatcatctgaattttcatcagtg
attctagaccaaaagagtcttctggaagtgaaggatcagttaaaacgttcaccttcagga
ctagactcagtgttgaagaatactgtgccatggggagtagcgtttcatcatgcaggtctt
acttttgaggagagggatatcatcgaaggagccttccgtcaaggttttattcgggtcttg
gcagcaacgtctactctctcttctggagtgaatcttcctgctcgtcgggtgattattcgc
actcccgtcttcagtggtcagcctttagatatcctcacttacaagcagatggttggtcgt
gctggaaggaaaggagtagacacaatgggtgaaagtatcctaatttgtaagaactctgag
aaatccaagggcattgctctgcttcaaggatctctgaagcctgtgcacagctgtctgcag
agacagggagaagtcactgctagcatgatacgagccattctggagataatcgttggtggg
gtggcaagtacgtcacaagatctgcaggcttatgcagcctgcaccttctcggctgctgct
gtaaaggaaggggagccagggagacggagaagtcaagatgatgctcagcttggagcagtc
gatgcctgtgtgacatggctcttagaaaatgagttcatccaggtggcagagcctagtgat
ggcacaggaggaaaggtctatcaccccacacatcttggatcagctactctttcctcgtca
ctttctccaactgatacccttgatatttttgctgacctccaaagagcaatgaaaggcttt
gttttagagaatgaccttcatattgtctacctggttacacctgtgtttgaagattggact
agtattgattggtatcggtttttctgtttatgggaaaagttaccaacttctatgaaaagg
gtggcagagctggttggagtggaggaagggttcttggctcgatgtgtgaaaggaaaagtg
gtagccagaactgagagacagcatcgacaaatggccatccataaaaggtttttcacaagt
cttgtgttactggatttaatcagtgaaatgcccttaaaggaaattaatcagaagtatgga
tgtaatcgtgggcagattcagtctttgcaacagtcagctgctgtctatgcaggaatgatt
acagtgttttctaaccgtctgggctggcacaacatggaactactactttcccagtttcag
aagcgtcttacttttggcatccagagagagctgtgtgacctgatccgggtgtctgcactc
aatgctcagcgagccaggctcctgtatgcctctggctttctcacggtggcagatcttgcc
agagctgaccttgctgaggtggaggtgcttctgaagaatgctctgcctttcaaaagtgcc
cggaaggcagtggatgaagaagaggaagcagctgaagaacgtcggagcatgcggactatc
tgggtgactggcaagggcttatctgcaagggaagcagcagccttaatagtgggagaagcc
aaaatgattctgcagcaggacttaattgaaatgggagtccagtgggatccacattcatct
ttgagttctagcacacactcactgaccagtgagtcagaagtaaaggaacagacgctcaaa
tcccaaactaagagttctcataaaaagttagcatcaaagagcagaagtagcacgagagca
agtggttctcatgacaagcagtcaccagatgcggaacgaggcatagatgaacgcagagag
catgcagactctctctgtgagttccaggggaatcacgagctccagacaccctccatttgt
agagcaagaaaacggacctctttaggtataaagaaagaaatacttcaaaagtctctgaaa
gaaggaaaaccaagcactaagggagttcttcaaactttctcattgcagaaaacaagaaaa
actgctttgagttttagttcaaagcaggtgaacaatagttttccatctgggagagacaga
aagcatcggaaaaaatcttggggcagtagtcccatgcgtgactctggggtgcatagagat
gatatacaaggacagactatgtgtatatctactctgtgtgaagactcacagaattcctca
gaggagcagaatgcagaatttagaagtccagggctatttgcaaaaaatgtatctttttgt
gccaaagaaaaatgcaacaaaacctcattccctttacaagtgcagggggcttgcttaagg
gaaaaaccagaaagcaatgctgctgtggaacattccattgtaggatctcagaataaaaat
atgactgggcagtcccctggtgctgctagagacagaagaggattggctgctcatgagata
gggaaggtaaatgaggtgctcacggagaatggtgcagaaagccagttccaagacacccag
ccagtcagccagtacctagagaaccacagtgagaaacacacaaacacttgcaccagacag
aagacattaatagagggacaagctggtagtaattatgtggccagagactcaaatgatgct
gtacccatcaaatgtgaacgtatgaagctcagtagcaaagaccatgactcaaatccttgt
tgtcaggcattgggaagtaacacaggcagaactgaggcacttcagtcaactggaaaactt
ggtcaagcaggaggccagtgtgaaaatcttctaaattctcctggaatacaagaacaaaca
ggtgcttatgcaacaaataaaactgagcatagtcatgtttctaacccaaccttctgtgac
tttggagatagcttattcttggatactcagtcagaggagataattgaacagatggcaact
gaaaataccatgcaaggagcaaaagcagtagggataatggaagagcgtcacagcacccca
ggtgagcagcacgtcccaggagcagccaacacagacaacggggacagtaagcatgtagag
tctgtgaaagcaaacactgaaaagagcatcagtagaggaactccagacagcctcattttc
tattctccaataccccagggggaaaatggtgcttgctttaaagagaatgagcattctgtt
actgattcccaattaaacagttttcttcaggggtttgaaacacaagaaatggtgaagcca
atcataatgctggctcctcaaatgagaactcctactgatgtggaggaagaaagtctgcct
gaaaccagtttgaatatgagtgatagtatcctgtttgacagttttggagaagatggctta
ggacaaggacaatcacctgatgtaaaggcaaaacagccactcctttctgaaatgacacta
aaccatttcagcaatcctccacacccacaagaagacccagttatgacaccaaatatgagt
gagccccagggtactccacagcaagtggctagtctcagtggtgaatctattatattttca
gagatagactctaatcaggtgatcgaagccttagacagtatggctgcatttcaggtgcaa
gagaactgtagcccagtaacccttaaaacattaaaacccagtgattctgcagtgctgggt
aatgagtgtccccaaggagaagtgatcaaaggagatcaaaatgaagaatccccaaagccc
aaactcacagagacaaatcaagataattcattcacttggtcaggagcatcatttaactta
agtccagaactgcaaaggattttagataaagtgtctagtcctctagaaaatgaaaagccc
aacttgatacatgtaaacttgtcttgctttgaaggaaacagcacagagtcacgtgagaga
cagaaaataaattcagatttggggacagttcagagaacttctcttttccccagtaatgga
gttaaaagcagaactcaagggctagagaccaaagccaggcatggtggagcctcatctccc
ttgcttcgtaaagaaagtgctgcagctgatgacaatggcctcattcctcctacacccgtt
cctgcttctgcttctaagctagcatttcctgagattctcggaacatctgtaaaacatcag
aaagccagcagtgttttacagttgggggaaagttgtttatttggctcaccttcagataat
caaaaccaggatttaagtcaagagcttagagacagcctcaaggactatgatggttctgtt
gtagacacaagtttttttctgcagtctcaggatggacttccattaactcaagcctcatgt
agctcagagagtctggccataatcgacgtagcgagtgaccagattctctttcagacattt
gtgaaggagtggcaatgccaaaagcgcttttccatctctctggcttgtgaaaagatgaca
agttcaacatcttccaaaactgctaccataggtggaaggttgaagcaagctagcttgccg
caggaagccactgttgaagatgacgggttccctgtgcgtgactctgacggtgctgtggtg
gttggactagcagtgtgctggggtgggaaggatgcctactacttgtcattgcagaaggaa
ccaaggcagtctgaaatgagtcctagtttggccccaccacctctggatgcaagactaact
gtgaaggagaggatggagtgccttcagtcctgcttgcaaaagaaatctgaccgagagcgg
tccgttgtcacctatgatttcatccagacctataaagtcctcctcctgtcttgtggcatc
tccctggaacccagttatgaagaccccaaggtggcatgttggcttctcgacccagattct
aaggagccaactctccatagcatagtgaccagttttctccaccatgagctagcactccta
gaaggaatagagacaggcccaggaattcagagcctggggctaaatgtgaacacagaacat
tctgggcggtacagagcatctgtggagtccattctcatcttcaactcaatgaatcaactc
aactctttgttgcagaaggaaaaccttcacgatattttctgcaaagtggagatgccctct
cagtactgcctggccttgctagaactgaatggaattggctttagtactgtggagtgtgaa
agtcagaagcatattatgcaagtcaagctggatgccattgagactcaagcctatcagcta
gctggccacagcttttcttttacaagtgcagatgacatcgcacaggttttatttttggaa
ctaaagctaccaccaaatggagagatgaaaacgcaaggcagcaaaaagactctgggttcc
accagaagagggaacgagagtgaccgcagaatgaggctgggaagacggttcagcactagt
aaggatattttaaataaattaaaggacttgcatcctttaccaggcctgatattggagtgg
agaagaattagtaatgctattaccaaagtggtcttccctctgcagcgggcaaagtacctg
aacccgtttctcagaatggaaaggatctaccctgtatcacagtcacacacagctacagga
cggataacctttacagaacccaatatccagaatgtgccaagagattttgagattaaaatg
ccaacactagtgagggagagcccaccttctcaagctccaggcaaaggccgattcccactg
gccataggacaaaataagaaggtttatggcctgcaccctgggcatggaacactgaagaag
gagaaggcctcagatagagggatgccattttcagtgagcatgcgccatgcctttgtgcct
ttcccaggtggtttaatattggctgccgactactctcagcttgagctgaggatcctggct
cacttatctcgtgactgtcgtctcattcaagtcttaaacacgggagcagatgtgttcagg
agcattgctgccgagtggaaaatgattgagcctgatgctgttggtgaagatctgaggcag
caagcaaagcagatttgctatggaattatatatggaatgggagctaaatctttaggagag
cagatgggcattaaagaaaatgatgctgcttgctatattgactctttcaagtccagatat
aaaggggttaatcatttcatgagggacacagtgaagaactgtagaagaaatggatttgtt
gagacaattttgggaagacgtagatatttgccaggaatcaaagatgacaatccttatcat
aaagcacacgctgaacgtcaggccatcaacacaacagtccaaggatcagctgctgatata
gtcaaaacggccacagttaacattcagaaacaattagagaccttccattcaaccttcaaa
tcccacggtcatcgggaaagcatgctccagaatgaccgaacaggattgttaccaaagaga
acactgagaggaatgttttgtcctgtgagaggaggattcttcatccttcagcttcatgac
gagcttttatatgaagtggcagaagaagatgttgttcaggtagctcagattgtcaagaat
gaaatggaatgcgctgtaaaactttctgtgaagttgaaagtgaaagtgaaaataggtgcc
agctggggagagctgaaggactttgatgtgtga

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