Mastomys coucha (southern multimammate mouse): 116085973
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Entry
116085973 CDS
T07224
Symbol
Abcd1
Name
(RefSeq) ATP-binding cassette sub-family D member 1 isoform X1
KO
K05675
ATP-binding cassette, subfamily D (ALD), member 1 [EC:
7.6.2.4
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc02010
ABC transporters
mcoc04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116085973 (Abcd1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
116085973 (Abcd1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcoc02000
]
116085973 (Abcd1)
Enzymes [BR:
mcoc01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
116085973 (Abcd1)
Transporters [BR:
mcoc02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD1 subgroup
116085973 (Abcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_29
AAA_23
Adeno_IVa2
Rad17
SMC_N
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
116085973
NCBI-ProteinID:
XP_031219915
LinkDB
All DBs
Position
X
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AA seq
736 aa
AA seq
DB search
MPVLSTPRPSRVTTLKRTAVVLALTAYGVHKIYPLVRQCLTPARGPQVPAGEPTQEASVA
TAAKAGMNRVFLQRLLVLLRLLFPRVLCRETGLLALHSAALVSRTFLSVYVARLDGRLAR
CIVRKDPRAFSWQLLQWLLIALPATFINSAIRYLEGQLALSFRSRLVAHAYGLYFSQQTY
YRVSNMDGRLRNPDQSLTEDVVAFAASVAHLYSNLTKPLLDVAVTSYTLLRAARSRGAGT
AWPSAIAGLVVFLTANVLRAFSPKFGELVAEEARRKGELRYMHSRVVANSEEIAFYGGHE
VELALLQHSYQDLASQINLILLERLWYVMLEQFLMKYVWSASGLLMVAVPIITATGYAES
DPEAMKKAALEMKEEELVSERTEAFTIARNLLTAAADATERIMSSYKEVTELAGYTARVY
EMFQVFEDVQHYRFKRTGDLEEAQAGPGSMVQSGVHVEGPLKIQGQVVDVEQGIICENIP
IITPTGEVVVPSLNIRVEEGMHLLITGPNGCGKSSLFRILGGLWPTYSGVLYKPPPQRMF
YIPQRPYMSVGSLRDQVIYPDSAEDMRRKGCSEQHLEAILGIVHLRHILQREGGWEAVCD
WKDILSGGEKQRIGMARMFYHRPKYALLDECTSAVSIDVEGKIFQAAKDAGIALLSITHR
PSLWKYHTHLLQFDGEGGWKFEKLDSAARLSLTEEKQRLEQQLAGIPKMQGRLQELRQIL
GEAAAPVQPLVSGIPT
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgctctccactccccggccctcacgggtgaccacgctgaagcgcacagctgtg
gtcctggccctcacagcctatggagtccacaaaatctaccctctagtacggcagtgtctg
acccctgccagaggccctcaggtgccagctggggagcccacgcaagaggcctctgtggcc
accgcagccaaggctggcatgaaccgggtattcctgcagcggctcctggtgctcctaagg
ctgctgttcccccgagtcttgtgccgggaaacaggactgctggccctgcattctgctgcc
ctggtaagccgaactttcctgtctgtgtacgttgcccgcctggatggcagactggcccgc
tgcattgtacgtaaggatccgcgggcctttagctggcaactgctacagtggctcctcatc
gcccttcctgccactttcatcaacagtgccatccgctacctagagggccagctggctctt
tctttccgaagccgtctagtagctcatgcctacggactctacttctcccaacagacttac
tatcgagtaagcaacatggatggacggcttcgaaaccctgatcagtctctgacagaggat
gtggtagcctttgctgcctctgtagcgcacctttattccaatctgaccaagccactcctg
gatgtggctgtgacctcctacactctgcttcgagctgcccgatcccgaggagctggcaca
gcctggccctcagccatcgctggcctggtggtgttcctcacagccaacgtgcttcgagcc
ttctctcccaagtttggggagctagtagcagaggaggcacggcgaaagggggaactacgc
tacatgcactctcgagtggtggccaactcagaggaaattgccttctacgggggccatgag
gtagagctggcactactacagcactcctatcaagacctggcttcacagatcaacctcatc
ctgcttgaacgcctatggtatgtcatgctggaacagttcctcatgaaatatgtgtggagt
gcatctggcctgcttatggtagctgtcccgatcatcacagccaccggctatgcagagtca
gacccagaagccatgaagaaggcagccttggaaatgaaggaagaggagctggttagtgaa
cgtacagaagccttcaccattgcccgaaacctcctcacagctgctgcagatgccacagag
aggatcatgtcatcctacaaggaggtgacagagctggctggctacacagccagagtgtac
gagatgttccaggtatttgaagatgtccaacactatcgttttaagaggacaggagatcta
gaggaggctcaggctgggcctgggtccatggtacagtctggtgtccatgtagaggggccc
ctgaagatccaaggccaggtggtggatgtggagcaggggatcatctgtgagaacatccct
atcatcacacccactggagaggtggtggtgcccagcctcaacatcagggtggaggaaggc
atgcacctgctcatcacaggccccaatggctgtggcaagagttctctgttccgaatccta
ggtggactctggcccacatacagtggtgtactctataagcccccaccccagcgcatgttc
tatatccctcagaggccctacatgtccgtgggctccttgcgtgaccaagtgatctatccc
gactctgcggaagacatgcggaggaagggctgctcggagcagcatctggaagccatcctg
ggcatcgtgcatctccgccacatcctgcaacgggagggaggttgggaggcagtgtgtgac
tggaaggacatcctgtctggaggtgagaagcagaggattggtatggcgcgcatgttctac
cacaggcccaagtacgccctcctggatgagtgcactagtgccgtgagcattgatgtggaa
ggcaagattttccaagcagccaaagatgctggtatcgcactgctctccatcacccatcga
ccctccctatggaagtaccacacacacttgctgcagtttgatggagagggaggctggaag
tttgagaagctggattctgctgcccgcctgagcctgactgaagagaagcagcgcctggag
cagcaactggcaggcatccccaaaatgcaggggcgccttcaggagctccggcagatcctt
ggcgaagctgcagccccagttcaacccttggtctcaggcatccccacttga
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