Mastomys coucha (southern multimammate mouse): 116086035
Help
Entry
116086035 CDS
T07224
Symbol
L1cam
Name
(RefSeq) neural cell adhesion molecule L1 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04360
Axon guidance
mcoc04514
Cell adhesion molecule (CAM) interaction
mcoc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116086035 (L1cam)
04517 IgSF CAM signaling
116086035 (L1cam)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
116086035 (L1cam)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcoc04515
]
116086035 (L1cam)
04090 CD molecules [BR:
mcoc04090
]
116086035 (L1cam)
04091 Lectins [BR:
mcoc04091
]
116086035 (L1cam)
Cell adhesion molecules [BR:
mcoc04515
]
Immunoglobulin superfamily
L1 family
116086035 (L1cam)
CD molecules [BR:
mcoc04090
]
Proteins
116086035 (L1cam)
Lectins [BR:
mcoc04091
]
I-type lectins (Siglecs)
116086035 (L1cam)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Bravo_FIGEY
Ig_VEGFR-1-like_5th
V-set
FN3_DSCAM-DSCAML_C
C2-set_2
Pur_ac_phosph_N
Ig_5
Fn3_ROS1
Ig_PDGFR_d4
Ig_C17orf99
Fn3_VIN3
Ig_VSIG10L2_N
C1orf162
Motif
Other DBs
NCBI-GeneID:
116086035
NCBI-ProteinID:
XP_031220058
LinkDB
All DBs
Position
X:complement(75604567..75630508)
Genome browser
AA seq
1259 aa
AA seq
DB search
MVVALRYVWPLLLCSPCLLIQIPDEYKGHHVLEPPVITEQSPRRLVVFPTDDISLKCEAR
GRPQVEFRWTKDGIHFKPKEELGVVVHEAPYSGSFTIEGNNSFAQRFQGIYRCYASNKLG
TAMSHEIQLVAEGAPKWPKETVKPVEVEEGESVVLPCNPPPSAAPLRIYWMNSKILHIKQ
DERVSMGQNGDLYFANVLTSDNHSDYICNAHFPGTRTIIQKEPIDLRVKPTNSMIDRKPR
LLFPTNSSSHLVALQGQSLILECIAEGFPTPTIKWLHPSDPMPTDRVIYQNHNKTLQLLN
VGEEDDGEYTCLAENSLGSARHAYYVTVEAAPYWLQKPQSHLYGPGETARLDCQVQGRPQ
PEITWRINGMSIEKVNKDQKYRIEQGSLILSNVQPSDTMVTQCEARNRHGLLLANAYIYV
VQLPARILTKDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGT
LGIRDLQANDTGRYFCQAANDQNNVTILANLQVKEATQITQGPRSAIEKKGARVTFTCQA
SFDPSLQASITWRGDGRDLQDRGDSDKYFIEDGQLVIQSLDYSDQGNYSCVASTELDEVE
SRAQLLVVGSPGPVPHLELSSRHLLKQSQVHLSWSPAEDHNSPIEKYDIEFEDKEMAPEK
WFSLGKVPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDV
RGEGNETNNMVITWKPLRWMDWNAPQIQYRVQWRPQGKQETWKEQTVSDPFLVVSNTSTF
VPYEIKVQAVNNQGKGPEPQVTIGYSGEDYPQVSPELEDTTIFNSSTVLVRWRPVDLAQV
KGHLRGYNVTYWWKDSQRKDSKKRFHKSHMVVPANTTSAILSGLRPYSSYHVEVQAFNGR
GLGPASEQPFSTPEGVPGHPEALHLECQSDTSLLLHWQPPLSHNGVLTGYLLSYHPLDGE
SKEQLFFNLSDPELQTHNLTNLNPDLQYRFQLQATTQQGPGEAIVREGGTMAQFGKPDFG
NISATAGENYSVVSWVPREGQCNFRFHILFKALPEGKVSPDHQPQPQYVSYNQSSYTQWN
LQPDTKYEIHLMKEKVLLRHLAVKTNGTGPVRVPTTGSFASEGWFIAFVSTIILLLLILL
ILCFIKRSKGGKYSVKDKEDTQVDSEARPMKDETFGEYRSLESDNEEKAFGSSQPSLNGD
IKPLGSDDSLADYGGSVDVQFNEDGSFIGQYSGKKEKEAAGGNDSSGATSPINPAVALE
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggttgtggcgctgcggtatgtgtggcctctcctcctctgcagcccctgcctgcttata
cagattcctgacgaatataaaggacatcatgtgctagagccacctgtcatcacagaacag
tctccacggcgcctggttgtcttcccaacagatgacataagcctcaaatgtgaagccaga
ggcagaccccaagtggagttccgctggacgaaagatggcatccacttcaaacccaaggaa
gaattgggtgtagtggtgcatgaggcaccctattctggctccttcaccatcgaaggcaac
aacagctttgcccagaggtttcagggcatctatcgctgctatgccagcaataagctagga
actgccatgtcgcatgagatccagctcgtggccgagggtgcccccaagtggccaaaggag
actgtaaaacctgtggaagtggaggaaggagaatcagtagttctgccttgcaaccctcca
cctagtgcagccccacttaggatctactggatgaacagcaagattttgcacatcaaacaa
gatgagcgggtgtccatgggccagaacggagacctatattttgccaatgtgcttacctcg
gacaatcattcagactacatctgcaatgcccatttccctggcacccggaccatcattcaa
aaggaacctattgacctccgggtcaagcccaccaacagcatgattgaccggaagccacgt
ctgctctttcccacaaattccagcagccacctggtagccttgcagggccagtcattgatc
ctggagtgcattgctgagggattccctacacccaccatcaagtggctgcaccccagtgac
cctatgccaacagaccgtgttatctaccaaaaccacaacaagaccctgcagctactcaat
gtgggcgaggaggacgatggcgaatatacctgccttgctgagaattcgctgggcagtgcc
cggcatgcctactatgtcactgtggaagctgccccatactggctgcagaagccccagagc
catttgtatggtccaggagagactgcccgcctagactgccaagtccagggtaggccccaa
ccagagatcacctggagaatcaacggaatgtctatagaaaaggtgaacaaggaccagaag
tatcggattgagcaggggtctctgatcctgagtaacgtgcagccaagtgacacaatggtg
acccagtgtgaagcccgcaaccggcatgggctcctgctagccaatgcctacatctatgtt
gtccagctgccagccaggatcctaacaaaagacaatcagacatacatggcagttgagggc
agtactgcttatttgctgtgcaaagcctttggagctcctgttcccagtgtccagtggctg
gatgaagaaggaaccacagtgcttcaggatgaacgatttttcccttatgccaatggaacg
ctgggcatcagagacctccaggccaatgacactggacgctatttttgccaggctgccaat
gaccagaacaatgtgaccattttggctaacctacaggttaaagaagcaacccagatcaca
cagggacctcggagcgcaattgagaaaaaaggtgcaagggtgacattcacatgccaggcc
tcctttgacccctctttgcaggccagcatcacttggcgtggagatgggagagacctccag
gatcgtggggacagtgacaagtatttcatagaagatgggcaactggtcatccagagcctg
gactacagtgaccagggcaactacagttgtgtggccagcactgaactggatgaagtggag
agcagggcacagctcttagtggtggggagccctgggccagtgcctcatctggagctctcc
agccgccacctactgaagcagagccaggtgcatttgtcttggagccctgctgaagaccac
aactctcccattgagaagtatgacatcgaatttgaggacaaggaaatggctcctgaaaaa
tggttcagtctgggcaaggtgccaggaaatcagacctctactaccctcaagctgtccccc
tatgtccattatacctttcgggtcactgccattaacaaatatggtcctggagaacccagc
cctgtctctgagactgtggtcacacctgaggcagccccagagaagaaccctgtggatgtg
agaggggaagggaatgagaccaacaatatggtcatcacatggaagccccttcggtggatg
gattggaatgccccccagattcagtaccgtgtacagtggcgtccacagggcaagcaggag
acctggaaggaacagaccgtgagcgaccccttcctggtggtgtctaacacttccacattt
gtgccttatgagatcaaagtccaggcagtgaacaaccagggcaagggccctgagccccag
gtcaccattggctattcaggggaagactacccccaggtgagccctgagcttgaagacacc
acaatcttcaactcaagcactgtgctggtcaggtggaggcccgtggacttggcccaggtt
aagggccacctcaggggatacaatgtaacatactggtggaaggacagtcagagaaaagac
agcaagaagcgtttccacaaaagccacatggtggtacctgccaacaccaccagtgccatc
ctcagtggtttgcgtccgtacagctcttatcatgtggaggtacaggcctttaatgggcgg
ggcttggggcctgcaagtgaacaacccttcagcactccagagggagtgcctggccaccct
gaggcattacacctggagtgccagtcggacactagcctgctactgcactggcagccacca
ctcagccacaatggagtgctcactggctacctgctctcttaccatcccttggatggggaa
agcaaagagcagttgttcttcaacctttcggacccagaactccagactcataatctcacc
aacctcaatcctgatctacagtaccgcttccagcttcaggccaccacccagcagggtcct
ggtgaggccatcgtgcgtgaaggaggcaccatggcccagtttggcaagccagattttggg
aacatctcagccacagcaggagaaaactacagcgtggtctcatgggtccctcgggagggc
cagtgcaatttcaggttccatatcttgttcaaagccttgccagaagggaaagtgagccct
gatcaccagcctcaacctcagtatgtcagctacaatcagagctcctacacacaatggaac
ctacagcctgacaccaaatatgagatccacctgatgaaggagaaggtcctcctgcgccat
ctggctgtgaagactaatggcactggccccgtgcgagttcctactacaggtagctttgcc
tccgagggctggttcatcgcctttgtcagcactatcattctcttgctcctcatcctgctc
atcctctgcttcatcaaacgcagcaagggtggcaaatactcagtgaaggacaaggaggac
actcaggtagattccgaggcccggcccatgaaagacgagaccttcggcgagtacaggtcc
ctggagagtgacaatgaagaaaaggcctttggcagtagccagccatctctcaatggagac
atcaaacccctaggcagtgatgacagcctggctgactatgggggcagtgtggacgtccag
ttcaatgaggatggctctttcatcggccagtacagtggcaagaaagagaaggaggcagca
ggaggcaatgacagctcaggggctacctctcctatcaatcctgcagtagccctagaatag
DBGET
integrated database retrieval system
