Mastomys coucha (southern multimammate mouse): 116086057
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Entry
116086057 CDS
T07224
Symbol
Robo1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
116086057 (Robo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcoc04515
]
116086057 (Robo1)
Cell adhesion molecules [BR:
mcoc04515
]
Immunoglobulin superfamily
ROBO family
116086057 (Robo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_J_second
Big_4
Motif
Other DBs
NCBI-GeneID:
116086057
NCBI-ProteinID:
XP_031220096
LinkDB
All DBs
Position
Unknown
AA seq
1664 aa
AA seq
DB search
MKWKHLPLLVMISLLTLSKKHLPLAQLIPAALVLFPTDPEDLERGNDNGTPAPTSDNDDN
SLGYTGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDK
DDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYICVARNYLGEAVSHNASLEVAILRDDF
RQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRK
SDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPT
VRWRKDDGELPKSRYEIRDDHTLKIRKVTAGDMGSYTCVAENMVGKAEASATLTVQVGSE
PPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQ
TGDLTVTNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVD
GTLILSCVATGSPVPTILWRKDGVLVSTQDSRIKQLESGVLQIRYAKLGDTGRYTCTAST
PSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSKNTVTLSWQPNLNSGA
TPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQIS
DPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSVEVHWTVDQQSQYIQGYKI
LYRPSGASHGESEWLVFEVRTPTKNSVVIPDLRKGVNYEIKARPFFNEFQGADSEIKFAK
TLEEAPSAPPRSVTVSKNDGNGTAILVTWQPPPEDTQNGMVQEYKVWCLGNETKYHINKT
VDGSTFSVVIPSLVPGIRYSVEVAASTGAGPGVKSEPQFIQLDSHGNPVSPEDQVSLAQQ
ISDVVRQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTY
QRGGEAVSSGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCTAGNGNSDSNLTTY
SRPADCIANYNNQLDNKQTNLMLPESTVYGDVDVSNKINEMKTFNSPNLKDGRFVNPSGQ
PTPYATTQLIQANRSNNMNNGGGGGDSSEKHWKPPGQQKQEVAPIQYNIMEQNKLNKDYR
ANDTIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKAPKQGGMNWADLLP
PPPAHPPPHSNSEEYSMSVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRGAA
SSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEDIGHMSHPPDRRRQPVSPPPPPRPISP
PHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVT
GSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAA
GRRHFHGSQCPRPTSPVSTDSNMSAAVIQKARPAKKQKHQPGHLRREAYADDLPPPPVPP
PAIKSPTVQSKAQLEVRPVMVPKLASIEARTDRSSDRKGGSYKGREVLDGRQITDLRTNP
SDPREAQEQANDGKGRGTKAAKRDLPPTKAHLVQEDILPYCRPTFPTSNNPRDPSSSSSM
SSRGSGSRQREQANVGRRNMAEMQVLGGFERGDENNEELEETES
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggaaacatcttcctcttctggtcatgatatctctcctcactctatcaaaaaag
catctccccctggcccagcttattccagcagctctggtgttgtttccgacagaccctgag
gacctagagagggggaacgacaacgggacgccagcccccacctctgataatgatgacaat
tcgctgggctacacaggctcccgtcttcgtcaggaagattttccaccgcgcattgttgag
cacccttcagacctgatcgtctccaaaggagaacctgccactctgaactgtaaagccgaa
ggccgccccaccccgactatagaatggtacaaaggcggggaaagagtggagacggacaaa
gatgaccctcgctcacaccggatgctgctgccaagtggatctttatttttcttacgcata
gtccacggacggaagagtaggcccgacgaaggggtctacatctgtgtagcaaggaattac
cttggagaggctgtgagccacaacgcatcgctggaggtagctatactacgggatgacttc
agacaaaacccttcagatgtcatggtggcggtaggtgagcctgcagtaatggaatgccag
cctcctcggggccatccagagcccaccatctcctggaaaaaggatggctcacccctggat
gataaagacgaaagaatcactatacgaggaggaaagctcatgatcacttatacccgtaaa
agcgatgctggcaagtatgtttgtgttggtaccaacatggtaggggaacgggagagcgaa
gtggcagagctaactgttttagagagaccatcatttgtgaagagacccagtaatttggca
gtgaccgtggatgacagtgcagaatttaaatgtgaggcacgaggagaccctgtgcctaca
gttcgatggaggaaagatgatggagagctgcccaaatccagatatgaaatccgagatgat
catactttgaaaattcggaaggtgacagcaggcgacatgggatcatacacttgtgttgca
gaaaatatggtcgggaaagctgaagcatctgccactttgacagttcaagttgggtctgag
ccaccacactttgttgtaaagcctcgtgaccaggtggttgccttgggacgaactgtgact
tttcagtgtgaagcaactggaaatcctcaaccagctatcttttggaggagagagggaagt
cagaatctgcttttctcctatcagcctccacagtcctctagccgattttcagtttcccag
acaggggacctcactgttacaaacgtccagcggtctgatgtcggttactacatctgccag
actttaaatgttgctggaagtatcatcacaaaggcatatttggaagttactgatgtgatt
gcagaccggcctcccccagtcattcgacaaggtcctgtgaatcagactgtagcagtggat
ggtactttaatcctcagctgtgtggccacaggcagtccagtgcccacaattctgtggagg
aaggatggagtccttgtttcaacccaagattctcggatcaaacagctggagagtggcgtg
ctgcagatccgctacgctaagctgggtgacacaggtcggtacacctgcacagcatcaacc
cccagtggtgaggccacgtggagcgcttacatcgaagtccaggaatttggagttccagtt
caacctccaagacccacggaccccaatttaatccccagtgccccctcaaagccggaagtt
acagatgttagcaaaaacacagtcactttatcgtggcagccaaacttgaactcaggagca
accccaacatcttatattatagaagccttcagccatgcatctggtagcagctggcagacc
gtggcagaaaatgtgaaaacagaaacatttgccatcaaaggcctcaaacccaacgcaatt
taccttttccttgtgagagcagctaatgcatatgggattagtgatccaagtcaaatatca
gatccagtgaaaacacaagatgtcccaccaaccagccaaggggtggaccacaagcaggtc
cagagagaactggggaatgtcgtcttgcatctccataaccctaccatcctttcttcctct
tcagtcgaagtgcactggactgtggaccaacaatctcaatatattcaaggctataaaatt
ctctaccggccatctggagccagccacggtgaatcagagtggttagtttttgaagtgagg
accccaaccaaaaacagtgtggtgatcccggatctcagaaaaggcgtcaactacgagatt
aaggctcgcccattttttaatgagtttcaaggagcagacagtgaaatcaaatttgccaaa
acgttagaagaagcaccaagtgcccctccccgaagtgtaactgtatccaagaatgatgga
aatgggactgcaattctggtcacttggcaaccgcctcctgaagacacacaaaatggaatg
gtccaagaatataaggtctggtgtctcggtaatgaaactaagtatcatataaacaagaca
gtggatggctctaccttctccgtggtcatcccctccctggttcctgggatccgatacagt
gtggaggtggcagccagcactggggcaggtcctggggtgaagagtgagccgcaattcatc
cagctagattctcacggaaaccccgtgtctcccgaggaccaagtcagccttgctcagcag
atctccgacgtggtgaggcagccagcgttcattgcgggcatcggggcagcctgttggatt
atcctcatggtgttcagcatctggctttacagacaccgcaagaagagaaacgggctcacc
agcacatacgcgggtatccggaaagtcccgtcctttaccttcacaccgacagtaacttat
caaagaggaggcgaagccgtcagcagtggagggaggccgggactcctcaacattagtgag
cctgccacacagccatggctggcagacacgtggcccaacacaggcaacaatcacaacgac
tgctccatcaactgctgcacagccggcaatggcaacagcgacagcaacctcacaacctac
agtcgcccagctgattgtatagcaaattataacaaccaactggataacaaacaaacaaat
ctgatgctccctgagtcaactgtttatggtgatgtggacgttagtaacaaaatcaatgag
atgaaaaccttcaatagcccaaatctgaaggacgggcgttttgtcaatccatcagggcag
cccactccctacgccaccactcagctcatccaggcaaaccgcagcaacaatatgaataac
ggtggcggtggcggagactccagcgagaagcactggaagccaccggggcagcagaaacag
gaagtggcgccaattcagtataacatcatggagcaaaacaagctgaacaaagattatcgg
gcaaatgacacgatccctccaaccatcccgtacaaccaatcctatgatcagaatacagga
ggatcttacaacagttcagatcggggaagcagtacatctggaagtcaaggccataagaaa
ggggcacggaccccaaaggcacccaagcagggtggcatgaactgggcagatttgctgccc
ccacccccagcacaccctcccccacatagcaacagcgaagaatacagcatgtccgtggat
gaaagctatgatcaagaaatgccctgtcctgtgcctcctgcacggatgtatttgcaacag
gatgaattagaagaagaggaagatgaaagaggccccacccctcctgtccggggggcagct
tcttctccagccgctgtgtcctacagccaccaatccacagccactctcaccccttctccc
caggaagagctccagcccatgttacaggattgtccagaggacatcggccacatgtcccac
ccaccagacaggaggcgacagcccgtgagccctcctccaccaccacggccaatttcccca
cctcatacttacggctacatttcaggaccccttgtctcagatatggataccgacgcccca
gaagaggaggaggacgaagctgacatggaagttgccaaaatgcagacccgaaggctgctg
ttacgtgggctcgagcagaccccagcatccagtgttggggacctcgagagctccgtcact
gggtccatgatcaatggctggggctcagcctcggaagaggacaacatttccagtggacgc
tccagtgtcagttcatcggatggctcctttttcactgacgctgatttcgcccaggcagtt
gctgcagccgcggagtacgcgggcctgaaagtggctcgccgccaaatgcaagatgctgct
ggccgtagacacttccatggctctcagtgccctaggcccacgagtcctgtgtctacagac
agcaacatgagtgccgctgtaatccagaaagccaggcccgccaagaaacaaaaacaccag
ccaggacatctgcgcagagaagcctacgcagatgatcttccaccccctccagtaccacca
cctgctataaaatcgcccaccgtccagtccaaggcccagctggaggtacgacctgtaatg
gtgcccaaactggcttctatagaagcaagaacagacagatcctcagacaggaaaggaggc
agttacaaggggagagaagttctggatggaagacaaataaccgacctgcgaacgaatcca
agtgaccccagagaagcacaggagcaggccaatgacgggaaaggacgaggaacaaaggca
gcgaagcgagacctcccgccaacgaaggcgcacctcgtccaagaggatattcttccgtac
tgtagacctactttcccaacgtcaaacaaccctagagatcccagttcctcaagctcaatg
tcatcaagaggatcaggaagccgacaaagagagcaagcaaatgtgggccgacggaatatg
gcagaaatgcaagtacttgggggatttgaaagaggagatgaaaataatgaagaattagag
gaaactgaaagctga
DBGET
integrated database retrieval system
