Mastomys coucha (southern multimammate mouse): 116086101
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Entry
116086101 CDS
T07224
Symbol
Hcfc1
Name
(RefSeq) host cell factor 1 isoform X1
KO
K14966
host cell factor 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03083
Polycomb repressive complex
mcoc04980
Cobalamin transport and metabolism
mcoc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
116086101 (Hcfc1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
116086101 (Hcfc1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116086101 (Hcfc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mcoc01009
]
116086101 (Hcfc1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116086101 (Hcfc1)
03029 Mitochondrial biogenesis [BR:
mcoc03029
]
116086101 (Hcfc1)
Protein phosphatases and associated proteins [BR:
mcoc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116086101 (Hcfc1)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
116086101 (Hcfc1)
HMT complexes
COMPASS/SET1 complex
116086101 (Hcfc1)
MLL-HCF complex
116086101 (Hcfc1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
116086101 (Hcfc1)
Mitochondrial biogenesis [BR:
mcoc03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
116086101 (Hcfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
116086101
NCBI-ProteinID:
XP_031220190
LinkDB
All DBs
Position
X
Genome browser
AA seq
2091 aa
AA seq
DB search
MASAVSPANLPAVLLQPRWKRVVGWSGPVPRPRHGHRAVAIKELIVVFGGGNEGIVDELH
VYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEW
KRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELRP
GSGVVAWDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGMSGCRLGDLWTLDIETL
TWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLN
LDTMAWETILMDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQVCCKDLWYLE
TEKPPPPARVQLVRANTNSLEVSWGAVATADSYLLQLQKYDIPATAATATSPTPNPVPSV
PANPPKSPAPAAAAPAVQPLTQVGITLVPQAATAPPSTTTIQVLPTVPGSSISVPTAART
QGVPAVLKVTGPQATTGTPLVTMRPTSQAGKAPVTVTSLPASVRMVVPTQSAQGTVIGSN
PQMSGMAALAAAAAATQKIPPSSAPTVLSVPAGTTIVKTVAVTPGTTTLPATVKVASSPV
MVSNPATRMLKTAAAQVGTSVSSAANTSTRPIITVHKSGTVTVAQQAQVVTTVVGGVTKT
ITLVKSPISVPGGSALISNLGKVMSVVQTKPVQTSAVTGQASTGPVTQIIQTKGPLPAGT
ILKLVTSADGKPTTIITTTQASGAGTKPTILGISSVSPSTTKPGTTTIIKTIPMSAIITQ
AGATGVTSSPGIKSPITIITTKVMTSGTGAPAKIITAVPKIATGHGQQGVTQVVLKGAPG
QPGTILRTVPMGGVRLVTPVTVSAVKPAVTTLVVKGTTGVTTLGTVTGTVSTSLAGAGAH
STSASLATPITTLGTIATLSSQVINPTAITVSAAQTTLTAAGGLTTPTITMQPVSQPTQV
TLITAPSGVEAQPVHDLPVSILASPTTEQPTATVTIADSGQGDVQPGTVTLVCSNPPCET
HETGTTNTATTTVVANLGGHPQPTQVQFVCDRQEAAASLVTSAMGQQNGNVVRVCSNPPC
ETHETGTTNTATTATSNMAGQHGCSNPPCETHETGTTSTATTAMSSMGTGQQRDTRRATN
TPTVVRITVAPGALERAQGTVKPQCQTQQTNMTSTTMTVQATGAPCSAGPLLRPSVALET
GSHSPAFVQLTLPSVRVGLSGPSIKDMPTGRQPETYHTYTTNTPTTARSIMVAGELSAAQ
VVPTSTYESLQANSPSSTMTMTALEALLCPSATVTQVCSNPPCETHETGTTNTATTSNAG
SAQRVCSNPPCETHETGTTHTATTATSNGGASQSEGGQQPASSHPCETHQTTSTGTTMSV
SVGALIPDATPSHGILESGLEVVAMPTVTSQSGATLLASFPAQRVCSNPPCETHETGTTH
TATTVTSNMSSNQDPPPAASDQGDVASTQGDSANITSASAITTSVSSTLPRAVTTVTQST
PVPGPSVPNISSLTETTPGALNSEVPIPATITVTIANTETSDMPFSAVDILQPPEELQVS
PGPRQQLPPRQLLQSASTPLMGESTEVLSASQTPELQAAVDLSSTGDPSSGQEPTTSAVV
ATVVVQPPAPTQSEVDQLSLPQELMAEAQAGTTTLMVTGLTPEELAVTAAAEAAAQAAAT
EEAQALAIQAVLQAAQQAVMAGTGEPMDTSEATAAVTQAELGHLSAEGQEGQATTIPIVL
TQQELAALVQQQQQLQEAQAQAQQQHHLPTEALAPADSLNDPSIESNCLNELASAVPSTV
ALLPSTATESLAPSNTFVAPQPVVVASPAKMQAAATLTEVANGIESLGVKPDLAPPPSKA
PVKKENQWFDVGVIKGTSVMVTHYFLPPDDAVQSDDDSGTVPDYNQLKKQELQPGTAYKF
RVAGINACGRGPFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYS
VYLAIQSSQASGEPKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTTKPAIIFRIA
ARNEKGYGPATQVRWLQETSKDSSGTKPASKRPMSSPEMKSAPKKSKADGQ
NT seq
6276 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggctgtgtctcctgctaacttgccagcggtgcttctgcagccccgctggaaa
cgggtggtgggctggtcgggtcccgtgccccgaccccgccacggccaccgtgcagtggct
atcaaggagcttatagtggtgtttggcggcggcaacgaggggatagtggacgaactacac
gtgtacaacactgcaaccaaccagtggttcatcccagctgtgagaggggatatccctcca
gggtgtgcagcctatggctttgtgtgtgatggtactcgcctcctggtgtttggtggaatg
gtagagtatggaaaatacagcaacgacctctatgaactccaggcaagtcgctgggaatgg
aagagactgaaggcaaagacacccaaaaatgggcctcctccgtgtcctcggcttggacat
agcttctcccttgtgggcaacaaatgttacctatttggaggtctggccaatgatagtgag
gaccccaagaacaacattccgaggtacctgaatgatttatatattctcgaactacggcca
ggctctggcgtggtagcttgggacatccctatcacttacggtgtcctgcctccaccccgg
gagtcacatactgctgtggtctacactgaaaaagataacaagaaatccaagctggtgatc
tatggagggatgagtggctgcaggttaggggacctttggaccctggacattgagacactg
acatggaataagcccagccttagtggagtggcaccccttcctcgaagcctccactccgca
accaccataggaaacaaaatgtatgtatttggtggctgggtgccccttgtcatggacgat
gtcaaagtggccacacacgagaaggagtggaagtgtaccaacacactggcttgtctcaac
ctggataccatggcctgggaaaccatcctgatggatacattggaggacaacattcctcga
gctcgagcaggccactgtgctgttgccatcaatactcgtctgtacatttggagtggccgt
gatggctaccgcaaggcctggaacaaccaagtctgttgcaaggacctgtggtatctggag
acagaaaagccaccacccccagcccgagtacaactagtacgagccaacaccaactcactg
gaggttagctggggtgcagtggcgacagccgacagttaccttcttcaactccagaaatat
gacattcctgccacagctgctacggctacctcccccactcccaatccagtcccatctgtg
cctgccaaccctcctaagagccctgcgccagcagcagctgcacctgctgtgcagccattg
acccaagtaggcatcacacttgtgccccaggctgccactgcacctccaagcacaaccact
atccaggtcttgccaacagtgccaggcagctccatttctgtgcccacggcagccaggact
caaggtgtccctgctgttctcaaagtgactggtcctcaagctacaacaggaacaccactg
gttaccatgagacctacaagccaggctggaaaagctcctgtcactgtgacttccctgcct
gccagtgtgcgaatggttgtaccaacacagagtgctcagggaacggtgattggcagcaac
ccacagatgagtgggatggctgcattggctgctgctgctgctgccacacagaaaatccct
ccttcctcagcacccactgtgctaagtgtcccagcaggcaccactattgtcaagacagtg
gctgtgacacctggcacaaccactcttcctgccactgtgaaggtggcttcctcccctgtc
atggtgagcaatccagccactcgaatgctaaagactgcagctgcccaagtggggacatct
gtgtcctctgctgccaacacatctacccgccctatcatcacagtacacaaatcagggact
gtaacagtagcccagcaagctcaggtggtgaccacggtggtaggcggagtcactaagacc
atcaccctagtgaagagccccatctctgtcccaggaggcagtgctctgatttccaatctg
ggaaaagtgatgtcagtggtccagaccaaaccagttcagacttcagcagtgacaggccaa
gcatctacaggtcctgtgactcagatcatccagaccaaaggacccctgccagcggggact
atcctgaagctggtgacatcagcagatgggaagcccacaaccatcattaccaccacacag
gctagtggggcagggaccaagcccactatcctgggcatcagtagtgtctctcccagcacc
accaaacctggcacaactaccatcattaagaccattcccatgtctgccattatcacccag
gcaggcgccacaggtgttaccagcagtcctggcattaagtcccccatcacaattatcacc
accaaagtgatgacttcaggaacaggagcacctgccaaaatcatcactgctgtccccaag
attgctactggccatgggcaacaaggagtgacccaggtggtgctaaagggggcccctgga
cagccaggcaccattctccgcactgtgcccatgggcggcgttcgcctggtcacccctgtc
accgtctccgctgtcaagccagctgttaccacattggttgtgaagggcaccacaggtgtt
acaacactaggcacagtaacaggcactgtctccaccagccttgcaggagctggggcacat
agcaccagtgcttccctggctacacctatcactaccttgggcaccattgctacgctctca
agtcaggtgatcaaccctactgctatcacagtgtcagctgcacagactacactaacagct
gctggtgggctcaccacacctacaatcacaatgcagcctgtctcccagcctacccaggtg
actctgattacagcacccagtggggttgaggcacagcctgtacatgaccttcctgtgtcc
attttggcctcacctactacagagcagcccacagcaacagtcaccattgctgactcaggc
cagggtgatgtacagcctggcactgttacactggtgtgttccaacccaccctgtgaaacc
catgaaacaggcaccaccaacacagctaccaccactgttgtggctaaccttggggggcat
cctcaacctacccaggtacagtttgtttgtgacagacaggaggcagctgcttcacttgtg
acctcagctatgggacaacagaatggtaatgtggtccgtgtctgttcaaaccccccctgt
gagacccatgagacaggcaccaccaacactgccacaacagccacctccaacatggctggg
cagcatggctgctcgaaccccccctgcgagactcatgagacaggcaccaccagcactgcc
actacagcaatgtccagcatgggcactgggcagcagcgagacactcgtcgtgccactaac
acccccactgtagtgcgaatcactgtggctcctggggcattggagagagcacagggtact
gtgaagcctcagtgccaaacccagcagaccaatatgaccagcactaccatgactgtgcag
gccactggagctccatgctcagctggcccactgcttaggccaagtgtggcattggagact
gggagccacagccctgcctttgtgcagctaacccttccaagtgtcagagttgggctaagt
ggtcccagcatcaaggacatgcccacagggcgccaaccagagacatatcatacttacaca
accaataccccaaccacagcccgctctatcatggttgctggggagcttagtgcagctcag
gtggtccccacatcgacatatgagagcctccaggcaaactctcctagcagcaccatgact
atgacagccctagaggcactgctgtgcccttcagctactgtgacccaagtctgctctaac
ccaccatgtgagacccatgagacgggtaccaccaacaccgccactacctccaatgcgggc
agtgctcagcgagtatgctccaacccaccttgtgagactcatgagacgggcaccacacac
acagctaccactgccacatcaaatggaggtgcaagccagtctgagggtggacaacagcct
gccagtagccatccctgcgagacacaccagaccacttccactggcaccactatgtcagtc
agtgtgggtgccctgattcctgatgctactccctctcatggaatcctggagtctggctta
gaggtggtagcaatgcccactgtcacctcccagtctggtgccacattgctggcctctttc
ccagcacagagggtatgctccaaccctccttgcgagacccacgagacaggtaccacccac
acagccaccactgtcacctctaacatgagctcaaaccaagaccctccaccagctgccagt
gaccaaggagatgtagcgagcacccaaggtgacagtgcgaatattaccagtgccagtgct
atcactacaagtgtgtcttctacattgccaagagcagtgaccactgtgacacagtctaca
ccagtcccaggtccctctgtgccgaacatctcatcattgactgagactaccccaggggct
ctgaattccgaagtccccatcccagccacgataacagtgaccatagccaacacagaaact
tctgacatgcccttctctgctgttgacatcctgcagcccccagaggaactccaggtctca
ccagggcctcgccagcagctgcctccacggcaactcctgcagtctgcctccacacccctg
atgggggagtctacggaagtcctgtcagcctcccagacccctgagctccaggccgccgtg
gatctgagcagcactggggacccatcttctggccaggagcctaccacctctgctgtcgtg
gccactgtggtggtccaaccacccgcacctacacagtctgaagtagaccagttatcactt
ccccaagagcttatggctgaagcccaggcgggcaccacaacccttatggtaacagggctc
actccagaggagttggcagtgactgctgctgctgaagcagctgctcaagctgcagccact
gaagaagcccaagccttggccatccaggctgtgctccaggccgcacagcaggctgtcatg
gcaggcactggggagcccatggatacatctgaagcaacagcagcagtgacacaagcagaa
ctgggtcacctttcagctgaaggccaagagggtcaggctaccaccatacccattgtgctg
acacagcaggagcttgcagccctggtgcagcagcagcagcagctccaggaggctcaagct
caagcccagcaacagcaccaccttcccactgaggctctggccccagctgacagtctcaat
gacccatccatcgagagcaactgcctcaacgagttagctagtgctgtccccagcactgtg
gccttgctaccctcaacagctacagagagcctagctccatctaacacatttgtggctccc
cagcctgttgttgtagccagtccagcaaagatgcaggctgcagctacccttactgaagtg
gccaatggcattgagtccctgggtgtgaaaccagacttggcacccccacccagcaaagcc
cctgtgaaaaaggagaaccagtggtttgatgtgggggtcattaagggtaccagtgtaatg
gtgacacactattttctgccaccagatgatgctgttcagtcagatgatgactcaggcaca
gtcccagactataaccagctaaagaagcaggagctgcagccaggcacggcttataaattt
cgagttgctggaatcaatgcttgtggccggggacccttcagtgagatctcagcctttaag
acttgtctgcctgggttcccaggggctccttgtgctataaaaatcagcaagagcccagat
ggtgctcacctcacctgggagccaccgtctgtgacctccggcaagatcatcgagtactct
gtgtacctggccatccagagctcacaggccagtggtgagcccaagagttccaccccagcc
cagctggccttcatgcgagtgtactgtgggcctagcccttcctgcctagtgcagtcctcc
agcctctccaatgctcacattgactatactacaaagcctgccatcatcttccgcattgct
gcccgcaatgaaaagggctacggccctgccacgcaagtgaggtggttgcaagaaaccagt
aaagacagctctggcaccaagccagccagcaagcggcccatgtcatctccagaaatgaaa
tctgctccaaagaagtctaaggctgatggtcagtga
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integrated database retrieval system
