Mastomys coucha (southern multimammate mouse): 116086105
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Entry
116086105 CDS
T07224
Symbol
Grik1
Name
(RefSeq) glutamate receptor ionotropic, kainate 1 isoform X1
KO
K05201
glutamate receptor, ionotropic kainate 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04080
Neuroactive ligand-receptor interaction
mcoc04082
Neuroactive ligand signaling
mcoc04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116086105 (Grik1)
04082 Neuroactive ligand signaling
116086105 (Grik1)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
116086105 (Grik1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mcoc04040
]
116086105 (Grik1)
Ion channels [BR:
mcoc04040
]
Ligand-gated channels
Glutamate (ionotropic)
116086105 (Grik1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
116086105
NCBI-ProteinID:
XP_031220191
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MERGTILNQPGLWTRDTSWTLLYFLCYILPQTSPQVLRIGGIFETVENEPVNVEELAFKF
AVTSINRNRTLMPNTTLTYDIQRINLFDSFEASRRACDQLALGVAALFGPSHSSSVSAVQ
SICNALEVPHIQTRWKHPSVDNRDLFYINLYPDYAAISRAVLDLVLYYNWKTVTVVYEDS
TGLIRLQELIKAPSRYNIKIKIRQLPSGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEIL
KQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSME
RLQAPPRPETGLLDGMMTTEAALMYDAVYMVAIASHRASQLTVSSLQCHRHKPWRLGPRF
MNLIKEARWDGLTGRITFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDGNRD
RSNNITDSLANRTLIVTTILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYD
VKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISI
LYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSD
VVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLT
VERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQSALVKN
SDEGIQRVLTTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITI
AILQLQEEGKLHMMKEKWWRGNGCPEEDSKEASALGVENIGGIFIVLAAGLVLSVFVAIG
EFLYKSRKNNDIEQKGKSSRLRFYFRNKVRFHGSKKESLGVEKCLSFNAIMEELGISLKN
QKKLKKKSRTKGKSSFTSILTCHQRRTQKKETVA
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcggcacaatcctcaatcaacccgggctctggaccagggacaccagctggaca
ctcctctatttcctgtgctacatccttcctcagacctcccctcaagtgctcaggatcgga
gggatttttgaaactgtggaaaatgaacctgttaatgttgaagaattagctttcaagttt
gcagtcaccagtattaaccgaaaccgaaccttgatgcccaataccacattaacctatgac
atccagagaattaatctttttgatagttttgaagcctcccgaagagcatgtgaccagctg
gctctcggggtggctgccctcttcggcccttcccacagctcctccgtcagtgctgtacag
tctatttgcaatgctctggaagttccacacattcagactcgctggaaacacccttctgtg
gacaacagagacttattttacatcaacctctacccggattatgcggctatcagcagggca
gtcctggatttggtcctctattacaactggaaaacagtgacggtggtgtatgaagacagc
acaggtctaattcgtctgcaagagctcatcaaagctccctccagatacaacattaaaatc
aaaatccgccagcttccctctgggaataaagatgccaaacctctgctcaaggagatgaag
aaaggcaaagagttctatgtgatatttgattgttcgcacgaaacagctgcggaaattctt
aagcagattttgttcatgggcatgatgactgaatactatcactacttcttcacaaccctg
gacttgtttgctttagatctggaactctataggtacagtggtgtaaatatgacaggattt
cggttgctaaatattgacaaccctcacgtgtcatccatcattgagaagtggtccatggag
aggttgcaggccccacccagacctgagactggccttcttgatggcatgatgacaactgaa
gcagctctgatgtacgatgctgtgtacatggtagccattgcctcccaccgtgcctctcag
ctgactgtcagctccctgcagtgccatcgacataagccatggcgccttggacccagattt
atgaacctcatcaaagaggcacggtgggatggcttgactgggcggatcaccttcaataag
acggatggcttgagaaaggattttgacctggacattatcagtctcaaagaggaaggaact
gaaaagattgggatctggaactccaacagtgggctgaacatgacggatggcaacagagac
aggtccaacaatatcacggattcgctggctaaccgaacactcattgtaaccactattctg
gaggagccctacgtgatgtacaggaaatccgataagcccctgtacggaaatgacagattt
gaaggatattgcctggatctgctgaaagaactgtcaaatatcctgggtttcctttatgat
gttaaactggttcctgacggcaaatatggagctcagaatgacaaaggggaatggaatggg
atggttaaagaactcatcgaccatagagctgacctggcagtggcccctctcactatcacg
tatgtacgggagaaagtcatcgatttctccaagcccttcatgaccctgggcattagcatc
ctttacagaaagcccaatggaaccaacccgggcgtcttctccttcctcaaccccctatct
ccagacatttggatgtacgtgctacttgcctgcctgggagtcagttgtgtgctctttgtg
attgcaaggttcacaccctacgagtggtataacccccacccgtgcaaccctgactcagat
gtggtggaaaacaatttcactttgctaaatagtttctggtttggagttggagctctcatg
cagcaaggatcggagctgatgcccaaggctctatcaaccagaatagttggaggaatatgg
tggtttttcaccctgatcatcatttcatcctacactgccaacctggctgccttcttgaca
gtagaaaggatggaatcccccattgattccgcagacgatctggccaaacaaaccaagata
gaatatggagcagtcagagatggctcaaccatgaccttcttcaagaaatcaaaaatctcc
acgtatgagaaaatgtgggctttcatgagcagtagacagcagagcgccctggttaaaaac
agtgatgaggggatccaaagggtgctcaccactgactacgccctgctgatggagtccacc
agcattgagtatgtgacacagaggaattgcaacctcactcagatcgggggcctcatagac
tccaaaggctatggagtggggacgcctatcggctccccttaccgggataaaattacaatt
gccattcttcaactacaagaagaagggaagcttcatatgatgaaagagaaatggtggaga
ggaaatggctgccctgaagaagacagtaaagaagccagtgctctgggagtggaaaatatt
gggggcatcttcattgttctggccgcgggactcgttctttctgtgtttgtagccattgga
gaatttttatacaaatcacggaagaacaatgacattgagcagaaaggaaagtcatcaaga
cttagattttattttaggaacaaagtaaggtttcatgggagcaaaaaagaaagccttggt
gtagagaagtgtctctctttcaatgccatcatggaggagctgggcatctcactcaagaat
cagaaaaagttaaagaaaaagtcaagaactaagggcaaatcttctttcacaagtatcctt
acttgtcatcagagacgaactcagaaaaaagagactgtggcgtga
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