Mastomys coucha (southern multimammate mouse): 116086116
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Entry
116086116 CDS
T07224
Symbol
Synj1
Name
(RefSeq) synaptojanin-1 isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc00562
Inositol phosphate metabolism
mcoc01100
Metabolic pathways
mcoc04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
116086116 (Synj1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
116086116 (Synj1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116086116 (Synj1)
Enzymes [BR:
mcoc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
116086116 (Synj1)
Membrane trafficking [BR:
mcoc04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
116086116 (Synj1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
116086116
NCBI-ProteinID:
XP_031220228
LinkDB
All DBs
Position
Unknown
AA seq
1611 aa
AA seq
DB search
MRKSWTCWSGSDASGGWSGGGCGRRRRRSRRKRAASEERRMAFSKGFRIYHKLDPPPFSL
IVETRHKEECLMFESGAVAVLSSAEKEAIKGTYAKVLDAYGLLGVLRLNLGDTMLHYLVL
VTGCMSVGKIQESEVFRVTSTEFISLRVDASDEDRISEVRKVLNSGNFYFAWSASGVSLD
LSLNAHRSMQEHTTDNRFFWNQSLHLHLKHYGVNCDDWLLRLMCGGVEIRTIYAAHKQAK
ACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVIYLDDCVSSFIQIRGSVPLFWEQP
GLQVGSHRVRMSRGFEANAPAFDRHFRTLKDLYGKQIVVNLLGSKEGEHMLSKAFQSHLK
ASEHASDIHMVSFDYHQMVKGGKAEKLHSVLKPQVQKFLDYGFFYFDGNEVQRCQSGTVR
TNCLDCLDRTNSVQAFLGLEMLAKQLDALGLAEKPQLVTRFQEVFRSMWSVNGDSISKIY
AGTGALEGKAKAGKLKDGARSVTRTIQNNFFDSSKQEAIDVLLLGNTLNSDLADKARALL
TTGSLRVSEQTLQSASSKVLKNMCENFYKYSKPKKIRVCVGTWNVNGGKQFRSIAFKNQT
LTDWLLDAPKLAGIQEFQDKRSKPTDIFAIGFEEMVELNAGNIVNASTTNQKLWAVELQK
TISRDNKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDTVKTGMGGATGNKGAVAIRML
FHTTSLCFVCSHFAAGQSQVKERNEDFVEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDL
PNEEVKELIRQQNWDSLIAGDQLINQKNAGQIFRGFLEGKVTFAPTYKYDLFSEDYDTSE
KCRTPAWTDRVLWRRRKWPFDRSAEDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTS
DHRPVVALIDIDIFEVEAEERQRIYKEVIAVQGPPDGTVLVSIKTPAQENTFFDDALIDE
LLQQFAHFGEVILIRFVEDKMWVTFLEGSSALNVLSLNGKELLNRTITITLKSPDWIKNL
EEEMSLEKISVALPSSASSTLLGEDAEVSADFDMEGDVDDYSAEVEELLPQHLQPSSSSG
LGTSPSSSPRTSPCQSPTVPEYSAPSLPIRPSRAPSRTPGPPSSQGSPVDPQPAAQKDSS
QTIEPKRPPPPRPVAPPARPAPPQRPPPPSGARSPAPARKEFGGVGAPPSPGVARREMEA
PKSPGTTRKDNIGRNQPSPQAGLAGPGPAGYGAARPTIPARAGVISAPQSQARASAGRLT
PESQSKPSETSKGVLGPAVLPEPLKPQAAFPLQPSLPTPAQKLQDPLVPIAAPMPPSGPQ
PNLETPPQPPPRSRSSQSLPSDSSPQLQVKTNGVSGVKQEPALKSDPFEDLSFSVLAVSK
AQPSVQISPALTPHPKMLIQLPSASQSKVNSLSSVSCMPTMPPVPEQSKTQKSMGSSANP
FPSLPSRNPFTDRTSAPGNPFRVQSQESEATSWLSKEEPAPNSPFPPLMPLSHDTSKPSS
SLVGFEDNFDLQSQSTVKISNPKGWVTFDEDDDFPTPGKSKSVYPDLLGGTPASSDDGCS
KGTSVSFCVLPARRPPPPPPVPPLPPGTTSSAGPSTTLASKASSTLEFTER
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagagctggacctgctggagcggaagtgacgcttcgggcggctggagcggcggc
ggctgcgggagaaggaggaggaggagccgtaggaagagggctgcctctgaagaaaggaga
atggcgttcagcaaaggatttcgaatctaccacaaattggatcccccaccgttcagcctc
atagtggaaactaggcataaggaagaatgtctcatgttcgagtctggggctgtggctgtg
ctctcatctgcagaaaaggaggctattaaaggcacatatgccaaagtactggatgcatat
ggacttttgggagttttacgattaaatcttggtgacaccatgttgcattatctggtccta
gtcactggatgcatgtctgttgggaaaattcaagaatctgaagttttcagagttacttcc
actgagtttatatcacttcgagttgatgcttcagatgaggaccgcatttcagaagtacga
aaagttttgaactcaggaaacttttactttgcatggtctgcatctggagtcagcttagat
ctgagtctaaatgcacatcgaagcatgcaagagcacacaactgacaataggtttttctgg
aaccagtctttgcacttgcatctcaagcactatggtgtgaactgtgatgactggttatta
cggctcatgtgtggaggggtagagattagaacaatctatgctgcccataagcaggcaaaa
gcctgcctcatttcaagactaagctgtgaacgagctggcacaaggttcaacgtccgggga
acaaatgatgatggtcatgttgccaactttgtagaaacagagcaggttatatacttagat
gactgtgtctcttctttcatacaaatccgaggatctgttccattgttctgggagcaacca
gggttgcaagtgggatcccatcgtgttcgtatgtcacgaggatttgaagccaatgcgcct
gcctttgacaggcatttccgaacacttaaggacttatatggtaaacaaatagtagtaaat
ctgcttggatctaaggaaggcgagcatatgctgagcaaggctttccagagtcatttgaaa
gcctctgaacatgcttctgatatccacatggtgtcttttgactatcatcaaatggttaaa
ggaggaaaggcagaaaaattacacagtgttctcaaaccacaagtccagaagtttctagat
tatggatttttttatttcgatggcaatgaagttcaaaggtgccagagtggtacagttcga
acaaactgcttggattgtctggatagaacaaatagtgtgcaggcattccttggcttagag
atgctagctaaacagctggatgctctgggcttggctgagaagcctcagttggtgactcgc
tttcaagaagttttccggtccatgtggtctgtgaatggcgattcgatcagtaaaatatat
gcaggcaccggagcccttgaagggaaggccaaggctggaaagttaaaagatggtgcacga
tctgtcaccagaaccattcagaataacttctttgacagctccaagcaagaagccattgat
gttttgcttctgggaaatactctaaacagcgatttagctgacaaagcccgagcactttta
actactggaagtttgcgtgtttctgaacagacattacagtcagcatcttccaaagtctta
aagaacatgtgcgagaacttctacaaatactcaaaacccaagaagattagagtgtgtgtt
ggaacctggaatgtgaacggcgggaagcagttccgcagcatagcattcaagaaccagacg
ctcactgactggcttctggatgctcccaagttagctggcatccaggagtttcaagataag
agaagtaagccaactgatatatttgcaattggctttgaagaaatggtggagctgaatgct
gggaacattgtgaatgcaagcacaacaaaccagaagctgtgggcagtggagctgcagaag
accatctcaagagacaacaagtatgttctgctggcctcggagcagttggtgggtgtctgc
ctgtttgtctttatcagaccacagcatgctccttttatcagggatgttgcagttgatact
gtgaaaactgggatgggaggtgcaactggaaacaagggcgctgttgcaattcggatgctc
ttccacaccaccagcctttgcttcgtctgcagccactttgctgcagggcagtcccaagtc
aaagagagaaatgaagattttgtagaaatagcacgaaaattgagttttcccatgggaaga
atgctcttctcccatgactatgtattttggtgtggtgatttcaactatcgaattgatctt
cctaatgaagaagttaaagagctcataagacagcaaaactgggattctcttatagctgga
gatcaactcatcaatcagaaaaatgcaggacagatctttagaggattcttagagggaaaa
gtaacgtttgctccaacctataaatatgacttattttctgaagactatgacaccagtgag
aagtgccgtacccctgcttggacagaccgcgtcctctggaggaggaggaagtggcctttt
gacagatcagctgaagatttagatcttctgaatgctagtttccaagatgaaagtaaaatc
ctttacacgtggacgcccggcaccttgctgcactatggaagagccgagctcaagacttct
gaccataggcctgtcgttgccctgattgacatagatatatttgaagttgaagctgaagag
agacaaagaatttataaagaagttattgcagtccagggcccaccagatggcacagtgctg
gtctcaatcaaaactcctgcacaagaaaatactttttttgatgatgctttgattgatgag
cttctgcagcagtttgcacactttggtgaagttatactcataagatttgtagaagataaa
atgtgggttacatttttggagggaagctctgccttgaatgttctgagcctaaatgggaaa
gagctattaaatcggactataacaattactttaaaaagtccagactggatcaaaaatttg
gaagaagagatgagtttagagaaaatcagtgtcgcgttgccctcgtcagcaagctccacc
ctgctcggtgaagacgcagaggtgtcagcagactttgatatggaaggtgatgtcgacgac
tacagtgctgaagtagaggagcttcttcctcagcatctgcaaccatcctcaagttctggc
cttggcacttctccaagctcttcaccccggaccagtccctgccagtcacccacagtacca
gagtactccgcaccttctcttcccattagacctagtcgagcaccgtcaagaactccagga
cctccaagttcacagggctctccagttgaccctcagccagcagctcagaaggattcttcc
cagaccatagagcccaagaggccaccccctccccgcccagttgctcctccagcacgtcct
gccccaccacagagaccacctccaccttcaggggctaggagtcctgcacctgctagaaaa
gaatttggaggtgttggagcccctcccagtcctggggttgctaggagagagatggaagca
cccaaaagccctggaacgacacggaaagataatataggacgtaatcagccttcccctcaa
gcaggacttgcaggcccaggacctgctggatatggtgcagctagaccgacaattccagct
cgtgctggagtgatcagtgcccctcagagccaggctcgggcatctgctggaaggctgact
cctgaaagccaaagcaagccctcagagacatcgaaaggtgttttaggtcctgctgtcctt
ccagaaccactgaagcctcaggctgcatttcctctgcagccttctctacccacgcctgct
caaaagttacaggacccgcttgtccccatagcagcacctatgcctccctccggcccccaa
ccaaatttggaaaccccaccacagcccccacctcggagcaggtcatcccaaagcttgcct
tcagactcctcaccacagctgcaagtaaaaacaaatggtgtttctggtgtcaaacaagag
ccagcattgaaaagtgacccatttgaagatctctcatttagtgtgcttgctgtatccaag
gctcagccttctgttcagatttcacctgctctgaccccacacccaaagatgttgattcag
ttgccatctgcatcacaaagtaaagttaactctttgagttctgtaagttgcatgccaacc
atgcctcctgttccagagcaaagcaagacacagaaaagtatggggagttctgcaaaccca
tttcccagcctgcccagcaggaacccttttacagacaggacttctgcccctggaaaccca
tttagagttcaatctcaagagtcagaggcaacttcttggctatccaaagaagagcctgct
cctaacagtcctttccctcctctcatgcctcttagtcacgacacaagcaagccttcaagt
tcacttgttggttttgaggacaattttgatctgcagagccagtctacagtaaaaataagc
aatcccaaaggatgggtaacctttgacgaagacgatgactttcctacaccaggaaagtca
aagtcagtttatccagacttactgggtggcacaccagcttcatctgatgatggctgcagt
aaaggtacaagcgtttctttctgtgtgttgccagccagaaggccaccaccaccacctccc
gtccctcctctaccccctggcacgacctcatctgcaggacctagcacaaccctggcatct
aaggcatcttccacattggagttcacagaaagataa
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integrated database retrieval system
