Mastomys coucha (southern multimammate mouse): 116086189
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Entry
116086189 CDS
T07224
Symbol
Dscam
Name
(RefSeq) Down syndrome cell adhesion molecule isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcoc04515
]
116086189 (Dscam)
Cell adhesion molecules [BR:
mcoc04515
]
Immunoglobulin superfamily
DSCAM family
116086189 (Dscam)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
Ig_5
Pur_ac_phosph_N
C2-set_2
Sp38
C1-set
V-set_CD47
Interfer-bind
fn3_2
ChitinaseA_N
VEGFR1-3_N_Ig-like
Adeno_E3_CR1
DUF6377
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
116086189
NCBI-ProteinID:
XP_031220393
LinkDB
All DBs
Position
Unknown
AA seq
2013 aa
AA seq
DB search
MWILALSLFQSFANVFSEEPHSSLYFVNASLQEVVFASTSGTLVPCPAAGIPPVTLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFSTLIHDNTYYCTAENPSGKIRSQDVHIKA
VLREPYTVRVEDQKTMRGNVAVFKCIIPSSVEAYVTVVSWEKDTVSLVSGSRFLITSTGA
LYIKDVQNEDGLYNYRCITRHRYTGETRQSNSARLFVSDPANSAPSILDGFDHRKAMAGQ
RVELPCKALGHPEPDYRWLKDNMPLELSGRFQKTVTGLLIENSRPSDSGSYVCEVSNRYG
TAKVIGRLYVKQPLKATISPRKVKSSVGSQVSLSCSVTGNEDQELSWYRNGEILNPGKNV
RITGLNHANLIMDHMVKSDGGAYQCFVRKDKLSAQDYVQVVLEDGTPKIISAFSEKVVSP
AEPVSLVCNVKGTPLPTVTWTLDDDPILKGSGHRISQMITSEGNVVSYLNISSSQVRDGG
VYRCTANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTYIHCRVIGYPYYSIKWYKN
ANLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQ
PFEFPRFSIGQRVFIPCVVVSGDLPITITWQKDGRPIPASLGVTIDNIDFTSSLRISNLS
LMHNGNYTCIARNEAAAVEHQSQLIVRVPPKFVVQPRDQDGIYGKAVILNCSAEGYPVPT
IVWKFSKGAGVPQFQPIALNGRIQVLSNGSLLIKHVVEEDSGYYLCKVSNDVGADVSKSM
YLTVKIPAMITSYPNTTLATQGQRKEMSCTAHGEKPIIVRWEKEDRIINPEMARYLVSTK
EVGEEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEIEIKDVKART
ITLRWTMGFDGNSPITGYDIECKNKSDSWDSAQRTKDVSPQLNSATIIDIHPSSTYSIRM
YAKNRIGKSEPSNEITITADEAAPDGPPQEVHLEPTSSQSIRVTWKAPKKHLQNGIIRGY
QIGYREYSTGGNFQFNIISIDTTGDSEVYTLDNLNKFTQYGLVVQACNRAGTGPSSQEII
TTTLEDVPSYPPENVQAIATSPESISISWSTLSKEALNGILQGFRVIYWANLIDGELGEI
KNVTTTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAAA
SASMVFVSWLPPLKLNGIIRKYTVFCSHPYPTVISEFEASPDSFSYRIPNLSRNRQYSVW
VVAVTSAGRGNSSEIITVEPLAKAPARILTFSGTVTTPWMKDIVLPCKAVGDPSPAVKWM
KDSNGTPSLVTIDGRRSIFSNGSFIIRTVKAEDSGYYSCVANNNWGSDEIILNLQVQVPP
DQPRLTVSKTTSSSITLSWLPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLEN
LKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVRLNLIGWN
DGGCPITSFTLEYRPFGTTVWTTAQRTSLSKSYILYDLQEATWYELQMRVCNSAGCAEKQ
ANFATLNYDGSTIPPLIKSVVQSEEGLTTNEGLKILVTISCILVGVLLLFVLLLVVRRRR
REQRLKRLRDAKSLAEMLMSKNTRTSDTLSKQQQTLRMHIDIPRAQLLIEERDTMETIDD
RSTVLLTDADFGEAAKQKSLTVTHTVHYQSVSQATGPLVDVSDARPGTNPTTRRNAKAGP
TARNRYASQWTLNRPHPTISAHTLTTDWRLPTPRATGSVDKESDSYSVSPSQDTDRARSS
MVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQLTAGTNEYTDSLTS
STPSESGICRFTASPPKPQDGGRVVNMAVPKAHRPGDLIHLPPYLRMDFLLNRGAPGTSR
DLSLGQACLEPQKSRTLKRPTVLEPTPMEASSSTSSTREGQQSWQQGAVATLPQREGAEL
GQAAKMSSSQESLLDSRGHLKGNNPYAKSYTLV
NT seq
6042 nt
NT seq
+upstream
nt +downstream
nt
atgtggatactggctctctccttgttccagagcttcgcgaatgttttcagtgaagagccc
cactccagcctctactttgtcaatgcatcgctgcaagaggtagtgtttgcaagcacgtcg
gggacgctggtgccctgcccagctgcaggcatccctcctgtgactctcagatggtaccta
gcgacgggcgaggagatctacgatgtccccgggatccgccacgtccatcccaatggcact
ctccaaattttcccctttcctccttcaagcttcagcaccttaatccatgataatacttac
tattgcacagctgaaaacccttcagggaaaattagaagtcaggatgtccacatcaaggct
gttttacgggagccctatacagtccgtgtggaggaccagaaaaccatgagaggcaatgtc
gcggtgttcaagtgcattatcccctcctcggtggaggcgtacgtcactgtcgtctcatgg
gagaaagacacggtttcacttgtctcaggatctagatttctcatcacatccacgggagcc
ttgtatattaaagatgtacagaatgaagatgggctgtacaactaccgctgcatcacgcgg
cacagatacacaggggagacaagacaaagcaacagcgccagactgttcgtgtcagaccca
gcgaactcagccccatccatcctggacgggtttgaccaccgcaaagccatggcagggcag
cgtgtggagctgccttgcaaagcacttgggcaccccgagccagactaccgctggctgaag
gacaacatgcccctggaactttctgggaggttccaaaagacagtgactgggctgctcatt
gagaacagccgcccctcagactcaggcagctacgtgtgtgaagtatccaaccgatacggc
actgccaaggtgataggccgcctgtacgtgaaacagccactgaaagccaccattagtccc
agaaaggttaaaagcagtgtgggcagccaggtctccttgtcctgcagtgtgacaggaaac
gaagaccaggaactctcctggtaccgaaatggcgaaatcctcaaccctggaaaaaacgtg
aggatcacaggactcaaccacgcaaaccttataatggatcacatggtcaagagtgatggg
ggcgcctaccagtgctttgtacgcaaggacaagctatctgctcaagactatgtccaggtg
gtccttgaagacggaactcccaaaatcatttctgcctttagcgagaaagtggtgagcccg
gcagagccagtgtccctcgtgtgcaatgtgaagggtacacccttgcccacggtcacctgg
accctggacgatgatcccatcctcaagggcagcggccaccgcatcagccaaatgatcaca
tccgaggggaacgtggtcagctatctgaatatctccagctcccaggtccgggatgggggt
gtctaccgctgcactgccaacaactcagctggagtcgtcctgtaccaggctcgaataaac
gtaagagggcctgcaagcatcagaccaatgaaaaacatcactgcgatagcgggacgtgac
acgtacatccactgccgcgtgattggctatccatattactccatcaagtggtacaagaac
gctaacctgcttcctttcaaccaccgccaggtggcgtttgagaacaatgggactctgaaa
ctctcagatgtgcagaaagaagttgatgagggagagtacacttgtaatgtgctggtacaa
ccacagctctccaccagccagagtgtccacgtgacagtaaaagttccacctttcatccaa
cctttcgagttcccaagattctccatcgggcagcgggttttcatcccatgtgtggtggtc
tcaggggacttacccatcaccatcacctggcagaaggatggccggccgatcccagcaagc
cttggggtaaccattgacaacattgacttcaccagctccctgaggatctccaacctctcc
ctgatgcacaatgggaattacacctgcatcgctaggaacgaggcagcagctgtggaacac
cagagtcagctgattgtgagagttcctcctaagtttgtggtacagccccgggaccaggat
gggatctatggcaaagcagtgattctcaattgctctgcagagggttatcctgtgcctaca
attgtgtggaaattctcaaaaggtgctggggtgccccaattccagccaattgccttgaat
ggccgaatccaggtcctgagtaatggctcactcttgatcaagcacgttgtagaagaagac
agtggctactacctctgcaaggtcagcaacgatgtgggcgcagacgtcagcaagtccatg
tacctcacggtgaaaattcctgccatgataacctcttaccccaacaccaccctggccact
cagggtcaaaggaaggagatgagctgcacagcacatggggagaagcccatcatcgtccgc
tgggagaaagaggacaggatcattaaccctgaaatggcccgttacctggtatccaccaag
gaggtgggagaggaagtgatctctacactgcagattttgccaacagtgagagaagattct
ggcttcttttcctgccatgctatcaattcatatggggaggaccgtggaataattcaactc
acagtgcaagaacccccagatcctcccgagattgagatcaaagatgtcaaagctcgcaca
atcactctcaggtggaccatggggtttgatggcaacagccccatcacaggctatgacatt
gaatgcaaaaataaatcagactcctgggattctgctcaaagaaccaaagatgtttcccct
cagctgaactcggccaccatcattgatatccacccttcctccacctacagcatccgcatg
tacgccaagaaccggattggcaagagtgagcccagcaacgagatcaccatcacggcggat
gaggcagctcctgatggtccacctcaggaagttcacttggaacccacctcatctcagagt
atcagggttacctggaaggctcccaagaaacatttacaaaatgggatcatacgtggctac
cagataggctaccgggagtacagcacagggggtaacttccagttcaacatcatcagtatc
gacaccaccggggacagcgaagtgtacaccctggacaacctgaataagttcacccagtac
ggcctggtagttcaggcctgcaaccgggccggcacaggaccttcttctcaggagataatt
accaccaccctggaggacgtacccagctaccctcccgaaaatgtccaagccatagcaacc
tcaccagaaagcatatcgatctcctggtccacactgtccaaggaggccttgaatgggatt
ctccagggattcagggtcatctactgggccaacctaatagacggagaactgggcgagatt
aagaacgtcaccaccacacagccttccttggagttggatggactagagaaatacaccaac
tacagtatccaggtgctggccttcacccgtgcaggggatggcgtccggagtgagcagatc
tttacccgtaccaaggaggatgttccaggtcctcctgccggcgtcaaggcagcagcagcc
tcagcctccatggtcttcgtgtcctggctgcctccactgaagctgaacggcatcattcgg
aagtacacagtgttctgctcccacccctaccccactgtcatcagtgagttcgaagcctcc
cctgactcattttcctacagaatccctaacctgagtcggaatcggcagtatagcgtctgg
gtggtggcagtgacttccgccggaagaggcaacagcagtgagatcatcaccgtggagcca
ctagctaaagctcctgcacggatcctcacattcagtggaacagtgactactccatggatg
aaggatattgtcttgccttgtaaagctgttggagacccatcacctgctgtaaaatggatg
aaggatagtaacgggacacccagcctggtgacgattgatggccgcaggagcatcttcagc
aatgggagtttcatcattcggacggtgaaggcagaggactccggctattacagctgtgtt
gccaataacaactggggatcagatgagatcatattaaatctgcaagtacaagttccacca
gatcagcctcggctcactgtatccaagacgacctcctcctctatcaccctctcctggctc
ccgggagataatggggggagctccatcagaggctacatcctgcaatattccgaggacaac
agtgaacagtggggcagctttcccatcagccccagtgagcgttcctaccgcttggaaaac
ctgaagtgtgggacgtggtataagttcacccttactgcccaaaatggagtaggacctgga
cgcataagtgaaatcatagaagccaaaactctggggaaagaaccccagttctccaaagag
caggagctcttcgccagcatcaataccacccgagtaaggctcaatctgattggctggaat
gatggcggctgtccaatcacctcattcactcttgagtacagaccctttgggaccacggtc
tggaccacagctcagcggacctctctttccaagtcctacattctgtatgacctgcaagaa
gccacatggtatgaactgcagatgcgagtgtgcaacagcgccggctgcgcagagaaacaa
gccaacttcgccacgctgaactacgatggcagtacaatccctccactcattaagtcagtt
gtccaaagcgaagaagggctgacaaccaacgaagggctcaagatccttgtcaccatctcc
tgcatcctggttggggttctgctgctctttgtgcttctgctggttgtgcggaggagacgg
cgggagcagaggctgaagaggctgagagatgcaaagagcttagctgaaatgctcatgagc
aagaacacacggacttcagataccttaagcaaacagcagcagactctgagaatgcacatt
gatatacccagggctcagcttttgattgaagagagagacacaatggagaccatagatgac
cgctccacagtcctgttgacggatgctgacttcggggaggcagccaaacagaagtcactg
acagtgacccacacggtgcattaccaatcagtgtctcaggccaccgggcccctagtggat
gtctccgatgctcgaccaggaacgaatcccaccaccaggaggaatgcaaaggctggaccc
acagcgagaaaccggtatgccagccagtggaccctcaacagaccccaccctaccatctca
gcacataccctcaccacagactggagactccctacacccagggctacaggatctgtggac
aaggagagcgacagctacagtgtcagcccatcacaggacacagaccgagcaaggagcagc
atggtctccacagaaagtgcctcctctacctacgaagaactggccagggcctatgaacac
gccaagatggaagagcaactgaggcatgccaagttcaccatcacagagtgcttcatatct
gatacgtcctccgagcagttgacggcagggacaaatgagtacacggacagtctgacctcc
agtaccccttcagaatcggggatctgcagattcactgcatctccccccaaacctcaggat
ggaggacgagtggtgaacatggcggtgccaaaggcccatcggccaggcgacctcatacac
ctgcctccatacctacgaatggacttcttgttaaaccggggcgcaccaggcaccagcagg
gacctgagtttaggacaagcgtgcttggaaccccagaaaagtcggaccctgaagcgcccc
acggtccttgagcccacccctatggaggcctcctcctccacctcttccacacgagaagga
cagcagtcgtggcaacaaggggccgtggccaccttacctcagcgagagggtgcagaactg
ggacaggcagctaaaatgagcagctcccaagagtcactgctggactcccggggccatttg
aaaggaaacaatccctacgcaaaatcttacaccttggtataa
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integrated database retrieval system
