Mastomys coucha (southern multimammate mouse): 116086806
Help
Entry
116086806 CDS
T07224
Symbol
Zeb1
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc05202
Transcriptional misregulation in cancer
mcoc05206
MicroRNAs in cancer
mcoc05215
Prostate cancer
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
116086806 (Zeb1)
05206 MicroRNAs in cancer
116086806 (Zeb1)
09162 Cancer: specific types
05215 Prostate cancer
116086806 (Zeb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcoc03000
]
116086806 (Zeb1)
Transcription factors [BR:
mcoc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
116086806 (Zeb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_15
zf-C2H2_6
zf-C2HE
Zn_SUZ12
Zn_ribbon_8
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
116086806
NCBI-ProteinID:
XP_031220768
LinkDB
All DBs
Position
Unknown
AA seq
1159 aa
AA seq
DB search
MIFSCSDKRCFSEKPARSFEGKGVLVASLWRGCGKDLSTGYRNCNFLLLASDSVCSTLNC
CCYCRCGFMKVTNYNTVVEANSDSDDEDKLHIVEEESIADAADCEGGMPDDELPAGQTVL
PGSSARAGSAKDCWQDDVKDDECDSDAEDEQNHDPNVEEFLQQQDTAVIYPEAPEEDQRQ
GTPEASGHDENGTPDAFSQLLTCPYCDRGYKRFTSLKEHIKYRHEKNEDNFSCSLCSYTF
AYRTQLERHMTSHKSGREQRHVTQSGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYE
CPNCKKRFSHSGSYSSHISSKKCISLMPVNGRPRSGLKTSQCSSPSLSTSPGSPTRPQIR
QKIENKPLQEPLSVNQIKTEPVDYEFKPIVVASGINCSTPLQNGVFSGGGQLQATSSPQG
VVQAVVLPTVGLVSPISINLSDIQNVLKVAVDGNVIRQVLENNQASLASKEQEAVSASSI
QQGGHSVISAISLPLVDQDGTTKIIINYSLEQPSQLQVVPQNLKKENPAPTNSCKSEKLP
EDLTVKSETDKSFEGARDDSTCLLCEDCPGDLNALPELKHYDPEHPAQPPPPAPATEKPE
SSTSSAGSGDLSPSQPPLKNLLSLLKAYYALNAQPSTEELSKIADSVNLPLDVVKKWFEK
MQAGQIPGQSPEPPSSGTGSVNIPAKTNEQPQPADGDEPQEDSTCGQSPLKMTSSPVLPV
GSAINGSRSCTSSPSPLNLSSARNPQSYSCVAEGAQEDPQVEPLDLSLPKQQGEALERST
VSSVYQNSVYSVQEEPLNLSCAKKEPQKDSCVTDSEPVVNVVPPSANPINIAIPTVTAQL
PTIVAIADQNSVPCLRALAANKQTILIPQVAYTYSATVSPAVQEPPVKVIQPNGSQDERQ
DTSSEGVSTVEDQNDSDSTPPKKKTRKTENGMYACDLCDKIFQKSSSLLRHKYEHTGKRP
HECGICRKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKRGAE
DRDAMEQEDAGPEVLQEVLTTEHVGARASPSQADSDERESLTREEDEDSEKEEEEEDKEM
EELQEEKECENPQGEEEEEEEEEEEEEEEEAEEAEPEAAAKTDGTVEDGAAQQAGSLEQK
ASESKSESEQLSEEKTNEA
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgattttcagttgttcagataaacgttgcttttcggagaagcctgctcgttcgttcgaa
gggaaaggtgtgttggtagcgtcattgtggagaggttgtggcaaggacctgagcacaggc
taccgcaattgtaatttcctgcttctagcgtcagatagtgtctgttctacattgaactgt
tgctgctattgccgatgtggctttatgaaagttacaaattataatactgtggtagaagca
aattcagattccgatgatgaagacaaactccatattgtggaagaagaaagcattgcagat
gcagctgactgtgaaggtggcatgccagatgatgaactgccagcaggccagacagtgcta
ccaggaagcagtgccagggcaggcagtgccaaggactgctggcaagacgacgtaaaagat
gatgagtgcgactcagatgcagaagatgagcaaaaccatgatccgaatgtggaagagttc
ctgcagcaacaagacaccgcagtcatttatcctgaggcgcctgaggaagaccagcggcag
ggcacgccagaagccagcggccatgacgaaaacggaacaccagatgcgttttcccagttg
ctcacttgcccatattgtgatagaggctacaagcgctttacctctctgaaagaacacatt
aagtaccgccatgagaagaacgaggacaacttcagctgctccctgtgcagctacaccttc
gcatacagaacccagcttgaacgccatatgacatcacataagtcaggaagagagcaaaga
catgtgacacagtctgggggtaaccgtaagttcaagtgcactgaatgtgggaaagcgttc
aagtacaaacaccacctgaaagagcacttgaggattcacagtggagagaagccatatgaa
tgcccaaactgcaagaaacgtttttcccattctggctcctacagctcacacataagcagt
aagaagtgtattagcttgatgcctgtgaatggtaggcccagatcagggctcaagacatct
cagtgttcctcgccatctctttccacatcaccaggcagtcctacacgcccacagatacga
cagaagatagagaataaaccccttcaagaaccgctttctgtaaaccaaatcaaaactgaa
cctgtggattatgagttcaaacccatagtggttgcttcaggaatcaactgttcaacccct
ttacaaaatggggtctttagcggtggtggccaattgcaggcaaccagttctcctcagggt
gtggtgcaagctgttgttctgccaacagttggtttggtatctcccataagtatcaactta
agtgacattcagaatgtacttaaagtggctgtagatggtaacgtaatacgacaagttttg
gagaataatcaagccagtcttgcatccaaagagcaagaagccgtgagtgcttcatccatc
cagcagggcggccattctgtcatctctgccatcagtcttcctttagttgatcaggatgga
acaaccaaaatcatcatcaactacagtcttgagcagcccagccaacttcaggttgtcccc
cagaatttaaagaaagaaaacccagcccctacaaacagctgcaaaagtgagaagttacca
gaagatcttactgtcaagtcagagacggacaaaagctttgaaggggccagggatgatagc
acttgccttctgtgtgaggactgcccaggggacctcaatgcacttccagaactgaagcac
tatgacccagagcaccctgctcagcccccaccccctgccccagccactgagaagccagag
tcctccacttcatcagctggaagtggagacttgtctcccagtcagccacctttaaagaac
cttctgtcactcttaaaagcctactatgctctgaacgcgcagccgagcacagaagagctc
tcaaagattgccgattctgtgaacctaccactggatgtagttaaaaagtggtttgaaaag
atgcaagctggacagattccagggcagtctcctgaaccaccttcttccggaacagggtca
gtaaacatccctgcaaaaaccaacgagcagcctcaacctgcagatggagatgagccccag
gaagacagcacatgtggacagagtcctctcaagatgacgagctctccagttttaccagta
ggatcagccattaacggttccagaagttgcacatcatccccatccccgctaaacctctcc
tcagccaggaacccacagagttactcttgtgtggcagaaggtgcccaggaggacccccaa
gtagaacctcttgatctctcactaccaaagcagcagggagaggcgctggaaaggtcgaca
gtcagtagtgtttaccagaacagtgtgtattctgtccaggaagaacccttgaacttgtct
tgtgcaaaaaaggaaccacaaaaggacagctgtgttacagactcagaaccagttgtaaat
gtagtcccaccaagtgccaaccccataaacattgctattcctacagtcactgcccagtta
cccacgatcgtggccattgcagaccagaacagtgttccatgcttgcgggcactcgccgcc
aacaagcagaccattctgattccccaagtggcatatacatattcagctacagtgagccct
gctgtgcaggagccaccagtgaaggtgatccagccaaatggaagccaggatgaaagacaa
gacactagctcagaaggagtctccactgtggaagaccagaatgactctgactccacgcca
cccaaaaagaaaactcggaagacagagaatggaatgtatgcatgtgacctgtgtgacaag
atatttcagaagagcagctcactgttgagacacaaatatgagcacacaggtaagaggcct
cacgagtgtggaatctgtagaaaggcatttaaacacaagcatcatttgattgagcacatg
cgactgcactctggggaaaagccctatcaatgtgacaagtgtggcaagcgcttctcacac
tcaggctcctactctcagcacatgaatcaccgctactcctactgcaagagaggagctgaa
gacagagacgccatggagcaggaagacgctgggccagaagtcctgcaggaagtcctgaca
actgagcatgttggtgcccgggcatctccctcacaggctgactcggacgagagagaaagt
ttgacaagggaagaggatgaagacagtgaaaaggaggaggaggaagaggataaagagatg
gaagaattgcaggaagaaaaggaatgtgagaacccacagggggaggaggaggaagaagaa
gaggaagaggaagaggaggaggaagaagaggcagaggaagctgagcctgaggcagcagcc
aagactgatggtacagtggaggacggagctgcacagcaggcaggcagcttagagcagaag
gccagtgagagcaagagtgagagcgagcaactgtctgaagagaagacaaatgaagcctag
DBGET
integrated database retrieval system
