Mastomys coucha (southern multimammate mouse): 116086971
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Entry
116086971 CDS
T07224
Symbol
Pkd2l2
Name
(RefSeq) polycystic kidney disease 2-like 2 protein isoform X1
KO
K04991
polycystin 2L2
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mcoc04040
]
116086971 (Pkd2l2)
Ion channels [BR:
mcoc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116086971 (Pkd2l2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Motif
Other DBs
NCBI-GeneID:
116086971
NCBI-ProteinID:
XP_031221164
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MAEASWWYRGGEGTSKHDLHYRREAEVNTTLEELLLYFIFLINLCILTFGTVNPHMYYLN
KVMSSLFVDTSLPDDERSSFRSIRSITEFWKFMEGPLLDGLYWDSWYGNKQLYNVKNSSR
IYYENILLGVPRVRQLRVRNNTCTVYPAFQSLVSDCYNKYTAESEDFSDFGLKRAPEWTH
SASSRIAPWHWGFVGVYRDGGYIVRLSKSKSETKAKFVNLRLNNWISRGTRAVFIDFSLY
NANVNLFCIIRLLAEFPATGGLLTSWQFYSVKLLRYVSYYDYFIASCEIIFCIFLFVFII
QELRKVNEFKSAYFRSVWNWLEMLLLVLCFLAVIFYAYCNMQSFLLLGQLLKNTESYPDF
YFLAYWHIYYNNVTAITVFFAWIKIFKFISFNETMSQLSSTLSRCMKDIVGFAIMFFIIF
SAYAQLAFLVFGSQVDDFSTFQNSIFAQFRIVLGDFNFAGIQQANWILGPIYFITFIFFV
FFVLLNMFLAIINDTYSEVKADYSIGRRPDFELGKIIKKSCFNVLEKLRLKKAQDSEDKK
IRKATGDLAQRARTEGFDESEIQEAEKMKRWKESLEKKYYSTEIQDDYQPVTQQEFRELF
LYAVELEKELHHVSLKLNQVMRKLH
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggcgtcttggtggtaccgaggaggtgaggggacttcaaaacatgacctgcat
tacagaagggaagcggaggttaacaccacacttgaggagttgttactctactttattttt
ttaataaatctatgcatattgacatttgggacagtcaatccacatatgtactacttaaac
aaagttatgtcatctctgtttgtggacacgtctctacctgatgacgaaagaagcagcttt
aggtccattcggagcataactgagttttggaagttcatggaagggccgctcctggacggc
ttgtactgggactcgtggtacggcaacaaacagctgtacaatgtgaagaacagcagccgc
atctactacgagaacattcttctcggcgtccccagagtgcggcagctgcgagtccgaaac
aacacttgcacggtctacccagcgttccagtccctggtcagcgactgttacaacaagtac
acagctgaaagcgaagacttctctgactttggcctcaaacgcgctccagaatggacgcac
tcggcttcttcccgcattgccccatggcactgggggtttgtcggtgtgtaccgagatgga
ggatatatagtcagattgtcaaaatcaaaatctgaaaccaaagccaaatttgttaacctg
cgactgaacaactggattagcagagggaccagggctgttttcattgatttttcactgtac
aatgctaatgtcaacctgttttgcatcatcaggctgttggcggagttccctgcaacgggt
gggctcctcacctcctggcaattctactctgtgaagctcctcagatacgtctcctactat
gattacttcattgcttcctgtgaaatcatattttgtatttttctttttgtcttcataata
caagaactgagaaaagtgaatgagtttaagtctgcctatttcagaagtgtctggaactgg
ctagaaatgctgcttctggtgctctgttttcttgccgtgattttctacgcgtactgtaac
atgcagagctttctcttactcggacagctgttaaaaaacactgaaagctatccggacttt
tattttctcgcatactggcacatttactataacaatgtaactgcgatcactgtcttcttt
gcatggataaagatattcaagttcataagcttcaacgagacgatgtctcagctgtcgtcc
acactctcccgctgcatgaaggacatcgtggggttcgccatcatgttcttcatcatattc
tctgcttacgcccagttggcatttcttgtttttgggtcacaggttgatgacttttccact
ttccaaaattccatatttgcacaatttcgaattgtcctcggggactttaactttgccggc
atccagcaggccaactggatcttgggacccatctacttcatcacattcatcttctttgtg
ttctttgtgcttctgaacatgttcttggcaataataaatgacacctattctgaagtgaag
gctgattattcaataggcagaagaccagattttgaacttggtaaaataattaaaaagagt
tgctttaatgttctcgagaaactcagactcaagaaagctcaagatagtgaagacaagaaa
atcaggaaagccactggagacttggcccagcgagcaagaacagaaggctttgatgaaagt
gagatccaagaggcagagaagatgaaaaggtggaaagaaagccttgaaaaaaagtattat
tctacagaaattcaagatgattaccagcctgtcactcagcaggaattccgagaactcttt
ttatatgctgtggagcttgagaaggaattacaccacgtcagcttaaaactgaaccaagtg
atgagaaagctacactag
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