Mastomys coucha (southern multimammate mouse): 116087027
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Entry
116087027 CDS
T07224
Symbol
Hars1
Name
(RefSeq) histidine--tRNA ligase, cytoplasmic
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116087027 (Hars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mcoc01007
]
116087027 (Hars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcoc03016
]
116087027 (Hars1)
Enzymes [BR:
mcoc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
116087027 (Hars1)
Amino acid related enzymes [BR:
mcoc01007
]
Aminoacyl-tRNA synthetase
Class II (A)
116087027 (Hars1)
Transfer RNA biogenesis [BR:
mcoc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
116087027 (Hars1)
Prokaryotic type
116087027 (Hars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
WHEP-TRS
HHH_3
tRNA-synt_2
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
116087027
NCBI-ProteinID:
XP_031221269
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MADRAALEELVRLQGAHVRVLKEQKASAEQIEEELTKLLKLKAQLGHDEGKQKFVLKTPK
GTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLTGKYGEDSKLIYDLKDQ
GGELLSLRYDLTVPFARYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAG
QFDPMIPDAECLKIMCEILSSLQIGNFLVKVNDRRILDGMFAVCGVPDSKFRTICSSVDK
LDKVSWEEVKNEMVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQAVEGLG
DLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEAVLLQMPTQAGEEPLGVGSIAAG
GRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEASEEKVRTTETQVLVASAQKKL
LEERLKLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRS
VASREEVDVRREDLVEEIRRRTNQPLSIS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcgtgctgcgctcgaggagctggtgcgactccagggagcgcatgtgagagtc
cttaaggagcagaaagcgtccgctgagcagatcgaggaggagttgacaaaactcctaaaa
ctgaaggcacagctgggccatgatgaaggcaaacagaagtttgtgctcaaaacccccaag
ggcacgagagactatagtccccggcagatggcagtccgggaaaaggtgtttgatgtcatc
atccgctgcttcaaacgccatggggcagaagtgatcgatacacctgtgtttgagctaaag
gaaacactgactgggaagtatggagaagattcaaagcttatctatgacctgaaggaccag
ggtggggagctgctgtccctccgttatgaccttactgtcccctttgctcggtatctggca
atgaataaactaaccaacattaaacgctaccacatagcaaaggtgtatcgccgggacaac
ccagctatgacccgaggccgttaccgggaattctaccaatgtgattttgacattgctggc
cagtttgaccccatgattcctgatgcagagtgcctaaagattatgtgcgagatcctgagt
tcacttcagattggcaactttctggtcaaggtaaatgataggcgcatcctagatgggatg
tttgctgtctgtggtgttcctgatagcaagttccgtaccatctgctcctcagtggacaaa
ctagacaaggtttcctgggaggaagtgaagaatgagatggtgggagagaagggccttgca
cccgaagtggctgatcgcatcggggactatgtccagcagcacggtggggtgtctctggtg
gagcagctactccaggatcctaaactctcccaaaacaaacaggctgtagagggcttggga
gacctgaagctgctctttgaatatctaaccctgtttggcattgatgacaagatctccttc
gacctgagccttgctcgagggttggactactatactggagtcatctatgaggcagtgctg
ctacagatgccaacccaagctggggaagagcccctgggtgtgggcagcatagctgctggg
gggcgctacgatggcctggtcggcatgtttgaccccaaagggcgcaaggtgccatgcgtt
gggctcagtattggagtggagcgaattttctccattgtagagcagagattagaggcttca
gaggaaaaggtacggaccacagagacacaggtgcttgtggcatctgcacagaagaagctg
ctggaggagagactgaagcttgtctcagagttatgggatgctgggatcaaggctgagctg
ctgtacaagaagaacccaaagttactgaaccagttgcagtactgtgaggaagcaggcatc
cccctggtggccatcatcggtgagcaggagctcaaggatggtgtcatcaagctccgctcg
gtggccagcagagaagaggtggatgtccgaagagaagaccttgtggaggaaatcagaaga
agaacaaatcagcccctctccatcagctga
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