Mastomys coucha (southern multimammate mouse): 116087041
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Entry
116087041 CDS
T07224
Symbol
Pcdhb1
Name
(RefSeq) protocadherin beta-1
KO
K16494
protocadherin beta
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcoc04515
]
116087041 (Pcdhb1)
Cell adhesion molecules [BR:
mcoc04515
]
Cadherins
Protocadherins
116087041 (Pcdhb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Ly49
Motif
Other DBs
NCBI-GeneID:
116087041
NCBI-ProteinID:
XP_031221311
LinkDB
All DBs
Position
Unknown
AA seq
818 aa
AA seq
DB search
MGAPRRKPLQNRQVGSLLLLWCVSVGGAATIRYSVAEEMESGSFVANVAKDLGLEVGKLA
ERGARLVAEGNRLHFRLHRKTGDLFVKEKLDREALCGKADPCVLHFEIILAEPLQSFRVE
VRVFDINDNAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSTNNYFHL
HTRFRSHGPKYAELVLDNPLDREAQPEVNLTITAVDGGSPPKSGTAVIRVVVLDVNDHVP
QFSRLVYRAQVPENSDNGSLVVVVTATDLDEGTNKQITYSLAENPEAVLQTFLVDPQTGE
VRLRGPLDFETIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVTISSVSSPLPEDS
PPQTVVALFTIRDRDVRVGGKINCFLKEDLPFVVKHTFRNSYSLVTDRSLDREDVSNYNI
TLIAMDTGPPNLSTETVIEVVISDINDNSPVFQEDSYVLTVRENNSPAVFIGKVHAEDLD
LGENAQITYSLLPPKSGDLSVFAYISINSDNGKLYALRTMDYEAIQDFQFVVKATDGGFL
SLSSQVTVRVVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQN
SWLSYHLLKATDLGLFSVQRQNGEIRTLRQISERDPMMQKLVILVQDHGQPALSTTASLN
ILLVDGFSEPYLQFQDPSKHSRKVNPTTKYLVISLAVLSFLFLLSVTVIFIIHLYQKIKH
RDKFTIQEHFYDDCNFPNNVVQGRGNGSLPQPCPYDMCSATGTGNSEFRFLKRFMPNFPF
PHATGEVKTEDDSSLPPGSNRNRSRGSEGHARIGDEYM
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgggagctccgcgcaggaagcctttgcagaacaggcaggtgggctctcttctccttctc
tggtgtgtgtctgtgggaggcgcggccactatccgctattcggtggcggaggagatggaa
agcggttcgtttgtggctaatgtggctaaggacctagggctagaggtggggaagctggca
gagcgtggggcacggctcgttgccgagggcaacaggttgcatttccggctccaccgcaag
actggagatttgttcgtcaaagagaaactagatcgcgaggcactttgtggcaaagctgac
ccgtgcgtgctgcactttgaaattattctggccgagccgctgcagtccttccgggtggaa
gtcagagtatttgatatcaatgacaatgcaccagtttttctaaacaaagagcctctttta
aagattccagagagcacccccttgggctcacgctttccactgcagagtgcccaggatctg
gacgtgggactcaatggtctccaaaactacaccttgagtacaaacaactatttccacctt
cacacacgcttccgaagccatggtcccaaatatgcagaacttgtgctggataatccccta
gatagagaggcgcagcctgaagtcaacttgaccattacagcggtggatggtgggtcccct
cccaaatctggcaccgctgtcattcgagtggttgtcctagacgtcaatgatcacgtgcct
cagttctctcgcttggtgtaccgtgctcaggtgccagagaacagcgacaatggctctttg
gtggtggtggtgactgccacggacctggatgagggcaccaacaagcagataacttactct
ttggctgaaaatccagaagcagttctacagacatttcttgttgatccacaaactggagaa
gttcgactccgtggacccctagattttgaaacgatagaaacatacgacattgacattcaa
gctacagatggaggaggtctttctgcccacagcaaagtcttggtggaagtggtggatgta
aacgacaatcctccagaagtgacaatctcctcggtgtccagccctcttcctgaggactct
ccaccccagactgtagtggctctcttcactatcagagaccgggatgtgcgagttggaggg
aaaatcaactgtttcctcaaagaagatttgccctttgtagtcaaacacacattccggaat
tcttactcgctggttactgacagaagcttggatagagaggatgtctccaactataatatt
accctcattgccatggatactggaccacccaatctgtccacagagactgtgattgaagtg
gtaatatctgatataaatgacaattctccagtctttcaggaggattcctatgtcttgact
gttcgtgaaaacaacagtcctgcagtttttattggcaaagtccatgccgaggatctagat
ttgggtgaaaatgcccaaataacatactccctgctgcctccaaagagtggtgatctgtca
gtctttgcttacatctccattaactcagacaatggaaagctctatgcactaagaaccatg
gattatgaggccattcaagactttcagtttgtggtaaaggcaactgatggtggttttctg
tcactgagtagccaggttactgtaagagtggttgttctggatgacaatgacaatcgtcca
atgatcttgtacccactgcaaaatggcactttgccctgcaatgacctggtgccaaggtct
gccgaggcaggatatctggtgaccaaagtagtggctgttgatggtgactctgggcagaat
tcctggctttcataccatcttcttaaagccacggaccttgggttattttctgttcaaaga
caaaatggggaaatacgtacactgaggcagatatctgagagagaccctatgatgcagaaa
ctggtcattcttgttcaggatcatggccaaccagctctctccactacagcctcacttaac
atcctgctggtagatggtttttcagagccatacctgcagttccaggatccatccaagcat
tctagaaaggtaaatccaaccacaaaatatttggtcatttctctggctgtgctttctttt
ctttttctcttgtctgtcactgtaatctttatcatacacctctaccagaagattaaacac
agagacaagttcacaattcaagagcacttctatgatgactgtaatttccctaacaacgtg
gtgcaaggaagaggcaacggttccttaccccagccttgtccgtatgacatgtgctcagcc
acgggaactgggaatagtgagttccgttttcttaagcgatttatgcccaacttcccattc
ccccatgccactggcgaggtgaaaacagaggatgactccagtttgcctccaggttctaat
agaaatcggtctcggggttcagagggccatgcccggataggagatgagtatatgtaa
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